EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000006879 (Gene tree)
Gene ID: 100952873
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 33819 bases
Position: chrGL873667.1:3506489-3540307
Accession: 100952873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000006162	ResIII	PF04851.15	4.4e-26	1	2
ENSOGAP00000006162	ResIII	PF04851.15	4.4e-26	2	2
ENSOGAP00000006162	DEAD	PF00270.29	2.5e-52	1	2
ENSOGAP00000006162	DEAD	PF00270.29	2.5e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000006888	SNRNP200-201	6599	XM_003799271	ENSOGAP00000006162	2136 (aa)	XP_003799319	H0WV46

Gene Model

Click here to download ENSOGAG00000006879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000006879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000006879	SNRNP200	84	43.852	ENSOGAG00000009875	ASCC3	74	47.382
ENSOGAG00000006879	SNRNP200	72	32.228	ENSOGAG00000032369	HFM1	68	31.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000006879	SNRNP200	100	99.906	ENSG00000144028	SNRNP200	100	99.906	Homo_sapiens
ENSOGAG00000006879	SNRNP200	99	90.935	ENSAPOG00000010223	snrnp200	99	90.824	Acanthochromis_polyacanthus
ENSOGAG00000006879	SNRNP200	100	99.860	ENSAMEG00000008996	SNRNP200	100	99.860	Ailuropoda_melanoleuca
ENSOGAG00000006879	SNRNP200	97	90.310	ENSACIG00000001764	snrnp200	98	90.310	Amphilophus_citrinellus
ENSOGAG00000006879	SNRNP200	99	90.841	ENSAOCG00000024593	snrnp200	100	90.096	Amphiprion_ocellaris
ENSOGAG00000006879	SNRNP200	97	90.150	ENSAPEG00000012554	snrnp200	100	90.150	Amphiprion_percula
ENSOGAG00000006879	SNRNP200	99	90.700	ENSATEG00000022522	snrnp200	99	90.590	Anabas_testudineus
ENSOGAG00000006879	SNRNP200	99	97.737	ENSAPLG00000004313	SNRNP200	100	97.737	Anas_platyrhynchos
ENSOGAG00000006879	SNRNP200	99	97.555	ENSACAG00000000434	SNRNP200	100	97.555	Anolis_carolinensis
ENSOGAG00000006879	SNRNP200	100	95.336	ENSANAG00000036625	SNRNP200	100	95.756	Aotus_nancymaae
ENSOGAG00000006879	SNRNP200	99	90.559	ENSACLG00000011188	snrnp200	99	90.449	Astatotilapia_calliptera
ENSOGAG00000006879	SNRNP200	99	90.653	ENSAMXG00000005684	snrnp200	99	90.543	Astyanax_mexicanus
ENSOGAG00000006879	SNRNP200	100	99.298	ENSBTAG00000000848	SNRNP200	100	99.298	Bos_taurus
ENSOGAG00000006879	SNRNP200	100	99.860	ENSCJAG00000007514	SNRNP200	100	99.860	Callithrix_jacchus
ENSOGAG00000006879	SNRNP200	100	99.067	ENSCAFG00020019979	SNRNP200	100	99.883	Canis_lupus_dingo
ENSOGAG00000006879	SNRNP200	100	99.485	ENSCHIG00000020611	SNRNP200	100	99.485	Capra_hircus
ENSOGAG00000006879	SNRNP200	100	100.000	ENSTSYG00000010467	SNRNP200	100	100.000	Carlito_syrichta
ENSOGAG00000006879	SNRNP200	99	99.436	ENSCAPG00000017234	SNRNP200	99	99.436	Cavia_aperea
ENSOGAG00000006879	SNRNP200	100	99.719	ENSCPOG00000006776	SNRNP200	100	99.719	Cavia_porcellus
ENSOGAG00000006879	SNRNP200	100	99.860	ENSCCAG00000033962	SNRNP200	100	99.860	Cebus_capucinus
ENSOGAG00000006879	SNRNP200	100	99.906	ENSCATG00000015790	SNRNP200	100	99.906	Cercocebus_atys
ENSOGAG00000006879	SNRNP200	100	99.579	ENSCLAG00000004116	SNRNP200	100	99.579	Chinchilla_lanigera
ENSOGAG00000006879	SNRNP200	100	99.860	ENSCSAG00000017369	SNRNP200	100	99.860	Chlorocebus_sabaeus
ENSOGAG00000006879	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSOGAG00000006879	SNRNP200	100	97.803	ENSCPBG00000022571	SNRNP200	100	97.803	Chrysemys_picta_bellii
ENSOGAG00000006879	SNRNP200	99	76.553	ENSCING00000005082	-	99	76.693	Ciona_intestinalis
ENSOGAG00000006879	SNRNP200	100	94.395	ENSCANG00000033932	SNRNP200	100	99.851	Colobus_angolensis_palliatus
ENSOGAG00000006879	SNRNP200	100	99.766	ENSCGRG00001022610	Snrnp200	100	99.766	Cricetulus_griseus_chok1gshd
ENSOGAG00000006879	SNRNP200	100	99.205	ENSCGRG00000016472	Snrnp200	100	99.205	Cricetulus_griseus_crigri
ENSOGAG00000006879	SNRNP200	100	89.934	ENSCSEG00000016399	snrnp200	100	89.934	Cynoglossus_semilaevis
ENSOGAG00000006879	SNRNP200	100	85.674	ENSCVAG00000017631	snrnp200	99	85.674	Cyprinodon_variegatus
ENSOGAG00000006879	SNRNP200	100	90.403	ENSDARG00000077536	snrnp200	99	90.403	Danio_rerio
ENSOGAG00000006879	SNRNP200	100	98.268	ENSDNOG00000011227	SNRNP200	100	98.268	Dasypus_novemcinctus
ENSOGAG00000006879	SNRNP200	100	97.148	ENSDORG00000005861	Snrnp200	100	97.148	Dipodomys_ordii
ENSOGAG00000006879	SNRNP200	100	74.302	FBgn0263599	l(3)72Ab	99	74.209	Drosophila_melanogaster
ENSOGAG00000006879	SNRNP200	95	99.742	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSOGAG00000006879	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSOGAG00000006879	SNRNP200	100	98.741	ENSEASG00005001884	SNRNP200	100	98.741	Equus_asinus_asinus
ENSOGAG00000006879	SNRNP200	100	99.860	ENSECAG00000019675	SNRNP200	100	99.860	Equus_caballus
ENSOGAG00000006879	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSOGAG00000006879	SNRNP200	99	90.888	ENSELUG00000018948	snrnp200	99	90.777	Esox_lucius
ENSOGAG00000006879	SNRNP200	100	99.906	ENSFCAG00000010699	SNRNP200	100	99.906	Felis_catus
ENSOGAG00000006879	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSOGAG00000006879	SNRNP200	100	99.625	ENSFDAG00000004683	SNRNP200	100	99.625	Fukomys_damarensis
ENSOGAG00000006879	SNRNP200	100	87.828	ENSFHEG00000003786	snrnp200	99	87.828	Fundulus_heteroclitus
ENSOGAG00000006879	SNRNP200	100	89.720	ENSGMOG00000004881	snrnp200	99	89.673	Gadus_morhua
ENSOGAG00000006879	SNRNP200	100	88.062	ENSGAFG00000010807	snrnp200	99	88.062	Gambusia_affinis
ENSOGAG00000006879	SNRNP200	100	90.051	ENSGACG00000011474	snrnp200	99	89.958	Gasterosteus_aculeatus
ENSOGAG00000006879	SNRNP200	95	97.738	ENSGAGG00000016069	SNRNP200	99	97.738	Gopherus_agassizii
ENSOGAG00000006879	SNRNP200	100	99.906	ENSGGOG00000005174	SNRNP200	100	99.906	Gorilla_gorilla
ENSOGAG00000006879	SNRNP200	97	87.834	ENSHBUG00000011322	snrnp200	99	87.880	Haplochromis_burtoni
ENSOGAG00000006879	SNRNP200	100	99.719	ENSHGLG00000006654	SNRNP200	100	99.719	Heterocephalus_glaber_female
ENSOGAG00000006879	SNRNP200	100	99.719	ENSHGLG00100018594	SNRNP200	100	99.719	Heterocephalus_glaber_male
ENSOGAG00000006879	SNRNP200	100	99.906	ENSSTOG00000016351	SNRNP200	100	99.906	Ictidomys_tridecemlineatus
ENSOGAG00000006879	SNRNP200	100	99.672	ENSJJAG00000023659	Snrnp200	100	99.672	Jaculus_jaculus
ENSOGAG00000006879	SNRNP200	100	87.587	ENSKMAG00000003665	snrnp200	99	87.587	Kryptolebias_marmoratus
ENSOGAG00000006879	SNRNP200	100	90.309	ENSLBEG00000021585	snrnp200	99	90.309	Labrus_bergylta
ENSOGAG00000006879	SNRNP200	82	94.779	ENSLACG00000000226	SNRNP200	99	94.779	Latimeria_chalumnae
ENSOGAG00000006879	SNRNP200	100	92.228	ENSLOCG00000015198	snrnp200	99	92.228	Lepisosteus_oculatus
ENSOGAG00000006879	SNRNP200	100	99.485	ENSLAFG00000015626	SNRNP200	100	99.485	Loxodonta_africana
ENSOGAG00000006879	SNRNP200	100	99.860	ENSMFAG00000040174	SNRNP200	100	99.860	Macaca_fascicularis
ENSOGAG00000006879	SNRNP200	100	99.860	ENSMMUG00000023261	SNRNP200	100	99.860	Macaca_mulatta
ENSOGAG00000006879	SNRNP200	100	99.813	ENSMNEG00000032398	SNRNP200	100	99.813	Macaca_nemestrina
ENSOGAG00000006879	SNRNP200	100	99.906	ENSMLEG00000019083	SNRNP200	100	99.906	Mandrillus_leucophaeus
ENSOGAG00000006879	SNRNP200	100	90.267	ENSMAMG00000007851	snrnp200	99	90.220	Mastacembelus_armatus
ENSOGAG00000006879	SNRNP200	97	87.834	ENSMZEG00005010787	snrnp200	99	87.880	Maylandia_zebra
ENSOGAG00000006879	SNRNP200	97	97.291	ENSMGAG00000001831	SNRNP200	100	97.291	Meleagris_gallopavo
ENSOGAG00000006879	SNRNP200	100	99.813	ENSMAUG00000011825	Snrnp200	100	99.813	Mesocricetus_auratus
ENSOGAG00000006879	SNRNP200	100	99.860	ENSMICG00000004710	SNRNP200	100	99.860	Microcebus_murinus
ENSOGAG00000006879	SNRNP200	100	97.238	ENSMOCG00000011814	Snrnp200	100	97.238	Microtus_ochrogaster
ENSOGAG00000006879	SNRNP200	99	89.056	ENSMMOG00000014167	snrnp200	99	88.951	Mola_mola
ENSOGAG00000006879	SNRNP200	100	99.017	ENSMODG00000008475	SNRNP200	100	99.017	Monodelphis_domestica
ENSOGAG00000006879	SNRNP200	99	90.841	ENSMALG00000001973	snrnp200	99	90.730	Monopterus_albus
ENSOGAG00000006879	SNRNP200	100	99.625	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.625	Mus_caroli
ENSOGAG00000006879	SNRNP200	100	99.672	ENSMUSG00000003660	Snrnp200	100	99.672	Mus_musculus
ENSOGAG00000006879	SNRNP200	100	99.719	MGP_PahariEiJ_G0025695	Snrnp200	100	99.719	Mus_pahari
ENSOGAG00000006879	SNRNP200	100	99.672	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.672	Mus_spretus
ENSOGAG00000006879	SNRNP200	100	99.813	ENSMPUG00000008949	SNRNP200	100	99.813	Mustela_putorius_furo
ENSOGAG00000006879	SNRNP200	100	99.205	ENSMLUG00000010493	SNRNP200	100	99.205	Myotis_lucifugus
ENSOGAG00000006879	SNRNP200	100	95.506	ENSMLUG00000027511	-	100	95.506	Myotis_lucifugus
ENSOGAG00000006879	SNRNP200	100	99.906	ENSNGAG00000021993	Snrnp200	100	99.906	Nannospalax_galili
ENSOGAG00000006879	SNRNP200	90	90.377	ENSNBRG00000017960	snrnp200	98	90.429	Neolamprologus_brichardi
ENSOGAG00000006879	SNRNP200	100	95.258	ENSNLEG00000000025	SNRNP200	100	95.593	Nomascus_leucogenys
ENSOGAG00000006879	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSOGAG00000006879	SNRNP200	100	95.974	ENSOPRG00000015464	SNRNP200	100	95.974	Ochotona_princeps
ENSOGAG00000006879	SNRNP200	100	99.625	ENSODEG00000008366	SNRNP200	100	99.625	Octodon_degus
ENSOGAG00000006879	SNRNP200	99	90.512	ENSONIG00000010714	snrnp200	99	90.403	Oreochromis_niloticus
ENSOGAG00000006879	SNRNP200	100	99.766	ENSOCUG00000009864	SNRNP200	100	99.766	Oryctolagus_cuniculus
ENSOGAG00000006879	SNRNP200	100	90.356	ENSORLG00000012286	snrnp200	100	90.356	Oryzias_latipes
ENSOGAG00000006879	SNRNP200	100	90.403	ENSORLG00020004648	snrnp200	100	90.403	Oryzias_latipes_hni
ENSOGAG00000006879	SNRNP200	100	90.356	ENSORLG00015019114	snrnp200	100	90.391	Oryzias_latipes_hsok
ENSOGAG00000006879	SNRNP200	99	90.606	ENSOMEG00000011834	snrnp200	99	90.496	Oryzias_melastigma
ENSOGAG00000006879	SNRNP200	100	98.456	ENSOARG00000013949	SNRNP200	100	98.456	Ovis_aries
ENSOGAG00000006879	SNRNP200	100	99.906	ENSPPAG00000041559	SNRNP200	100	99.906	Pan_paniscus
ENSOGAG00000006879	SNRNP200	100	99.906	ENSPPRG00000004435	SNRNP200	100	99.906	Panthera_pardus
ENSOGAG00000006879	SNRNP200	100	99.438	ENSPTIG00000006380	SNRNP200	100	99.438	Panthera_tigris_altaica
ENSOGAG00000006879	SNRNP200	100	99.906	ENSPTRG00000012230	SNRNP200	100	99.906	Pan_troglodytes
ENSOGAG00000006879	SNRNP200	100	99.860	ENSPANG00000006017	SNRNP200	100	99.860	Papio_anubis
ENSOGAG00000006879	SNRNP200	100	91.152	ENSPKIG00000014762	snrnp200	99	91.152	Paramormyrops_kingsleyae
ENSOGAG00000006879	SNRNP200	100	96.771	ENSPSIG00000008580	SNRNP200	100	96.771	Pelodiscus_sinensis
ENSOGAG00000006879	SNRNP200	100	99.017	ENSPCIG00000023050	SNRNP200	100	99.017	Phascolarctos_cinereus
ENSOGAG00000006879	SNRNP200	100	90.407	ENSPFOG00000015110	snrnp200	99	90.407	Poecilia_formosa
ENSOGAG00000006879	SNRNP200	97	90.275	ENSPLAG00000006711	snrnp200	99	90.275	Poecilia_latipinna
ENSOGAG00000006879	SNRNP200	97	90.220	ENSPMEG00000021166	snrnp200	99	90.220	Poecilia_mexicana
ENSOGAG00000006879	SNRNP200	100	90.496	ENSPREG00000008875	snrnp200	99	90.496	Poecilia_reticulata
ENSOGAG00000006879	SNRNP200	100	99.906	ENSPPYG00000012068	SNRNP200	100	99.906	Pongo_abelii
ENSOGAG00000006879	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSOGAG00000006879	SNRNP200	100	99.906	ENSPCOG00000024608	SNRNP200	100	99.906	Propithecus_coquereli
ENSOGAG00000006879	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSOGAG00000006879	SNRNP200	99	86.042	ENSPNYG00000017476	snrnp200	99	85.948	Pundamilia_nyererei
ENSOGAG00000006879	SNRNP200	100	86.142	ENSPNAG00000010998	snrnp200	99	86.142	Pygocentrus_nattereri
ENSOGAG00000006879	SNRNP200	100	99.813	ENSRNOG00000012157	Snrnp200	100	99.813	Rattus_norvegicus
ENSOGAG00000006879	SNRNP200	100	99.906	ENSRBIG00000044690	-	100	99.906	Rhinopithecus_bieti
ENSOGAG00000006879	SNRNP200	100	99.906	ENSRROG00000037952	-	100	99.906	Rhinopithecus_roxellana
ENSOGAG00000006879	SNRNP200	100	99.860	ENSSBOG00000035471	SNRNP200	100	99.860	Saimiri_boliviensis_boliviensis
ENSOGAG00000006879	SNRNP200	97	98.936	ENSSHAG00000000758	SNRNP200	100	98.936	Sarcophilus_harrisii
ENSOGAG00000006879	SNRNP200	99	91.686	ENSSFOG00015018826	snrnp200	99	91.573	Scleropages_formosus
ENSOGAG00000006879	SNRNP200	99	90.559	ENSSMAG00000005463	snrnp200	99	90.449	Scophthalmus_maximus
ENSOGAG00000006879	SNRNP200	99	90.794	ENSSDUG00000021410	snrnp200	99	90.684	Seriola_dumerili
ENSOGAG00000006879	SNRNP200	99	90.700	ENSSLDG00000010884	snrnp200	99	90.590	Seriola_lalandi_dorsalis
ENSOGAG00000006879	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSOGAG00000006879	SNRNP200	100	97.566	ENSSPUG00000003726	-	100	97.566	Sphenodon_punctatus
ENSOGAG00000006879	SNRNP200	99	90.841	ENSSPAG00000001842	snrnp200	99	90.730	Stegastes_partitus
ENSOGAG00000006879	SNRNP200	100	99.719	ENSSSCG00000008127	SNRNP200	100	99.719	Sus_scrofa
ENSOGAG00000006879	SNRNP200	99	88.037	ENSTGUG00000014475	-	100	88.037	Taeniopygia_guttata
ENSOGAG00000006879	SNRNP200	99	90.465	ENSTRUG00000001307	snrnp200	99	90.356	Takifugu_rubripes
ENSOGAG00000006879	SNRNP200	100	85.992	ENSTNIG00000004320	snrnp200	100	85.992	Tetraodon_nigroviridis
ENSOGAG00000006879	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSOGAG00000006879	SNRNP200	100	99.532	ENSTTRG00000004983	SNRNP200	100	99.532	Tursiops_truncatus
ENSOGAG00000006879	SNRNP200	75	93.023	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSOGAG00000006879	SNRNP200	100	99.906	ENSUMAG00000012385	SNRNP200	100	99.906	Ursus_maritimus
ENSOGAG00000006879	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSOGAG00000006879	SNRNP200	100	99.673	ENSVVUG00000026247	SNRNP200	100	99.673	Vulpes_vulpes
ENSOGAG00000006879	SNRNP200	100	94.343	ENSXETG00000001243	snrnp200	100	94.343	Xenopus_tropicalis
ENSOGAG00000006879	SNRNP200	97	90.525	ENSXMAG00000002058	snrnp200	98	90.525	Xiphophorus_maculatus