EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000006882 (Gene tree)
Gene ID: 100950051
Gene Symbol: PABPC5
Alias: -
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrGL873705.1:2753380-2754528
Accession: 100950051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000006158	RRM_5	PF13893.6	9.9e-12	1	2
ENSOGAP00000006158	RRM_5	PF13893.6	9.9e-12	2	2
ENSOGAP00000006158	RRM_1	PF00076.22	9.8e-80	1	4
ENSOGAP00000006158	RRM_1	PF00076.22	9.8e-80	2	4
ENSOGAP00000006158	RRM_1	PF00076.22	9.8e-80	3	4
ENSOGAP00000006158	RRM_1	PF00076.22	9.8e-80	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000006884	PABPC5-201	1149	-	ENSOGAP00000006158	382 (aa)	XP_012667524	H0WV43

Gene Model

Click here to download ENSOGAG00000006882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000006882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000006882	PABPC5	93	58.673	ENSOGAG00000026047	-	98	58.333
ENSOGAG00000006882	PABPC5	96	61.035	ENSOGAG00000033115	-	58	61.389
ENSOGAG00000006882	PABPC5	70	38.356	ENSOGAG00000014161	CELF5	55	38.356
ENSOGAG00000006882	PABPC5	70	36.709	ENSOGAG00000031801	-	51	36.709
ENSOGAG00000006882	PABPC5	96	59.780	ENSOGAG00000032999	PABPC1L	60	59.831
ENSOGAG00000006882	PABPC5	96	66.942	ENSOGAG00000004067	PABPC4	57	67.135
ENSOGAG00000006882	PABPC5	96	62.810	ENSOGAG00000025522	-	59	63.202
ENSOGAG00000006882	PABPC5	93	58.673	ENSOGAG00000029513	-	98	58.333
ENSOGAG00000006882	PABPC5	96	57.967	ENSOGAG00000026166	PABPC4L	97	57.865
ENSOGAG00000006882	PABPC5	95	59.669	ENSOGAG00000033369	-	61	59.497
ENSOGAG00000006882	PABPC5	95	54.545	ENSOGAG00000007921	-	61	54.494
ENSOGAG00000006882	PABPC5	96	30.814	ENSOGAG00000002274	TRNAU1AP	62	30.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000006882	PABPC5	99	96.850	ENSG00000174740	PABPC5	99	96.850	Homo_sapiens
ENSOGAG00000006882	PABPC5	99	96.588	ENSAMEG00000020114	PABPC5	100	96.588	Ailuropoda_melanoleuca
ENSOGAG00000006882	PABPC5	99	96.850	ENSANAG00000005063	PABPC5	99	96.850	Aotus_nancymaae
ENSOGAG00000006882	PABPC5	100	95.550	ENSBTAG00000019942	PABPC5	100	95.550	Bos_taurus
ENSOGAG00000006882	PABPC5	99	96.325	ENSCJAG00000003665	PABPC5	99	96.325	Callithrix_jacchus
ENSOGAG00000006882	PABPC5	100	96.073	ENSCAFG00000017452	PABPC5	100	96.073	Canis_familiaris
ENSOGAG00000006882	PABPC5	100	95.550	ENSCHIG00000019004	PABPC5	100	95.550	Capra_hircus
ENSOGAG00000006882	PABPC5	100	96.335	ENSTSYG00000036351	PABPC5	100	96.335	Carlito_syrichta
ENSOGAG00000006882	PABPC5	99	89.005	ENSCAPG00000010714	PABPC5	100	89.005	Cavia_aperea
ENSOGAG00000006882	PABPC5	100	94.503	ENSCPOG00000002555	PABPC5	100	94.503	Cavia_porcellus
ENSOGAG00000006882	PABPC5	99	96.850	ENSCCAG00000032154	PABPC5	99	96.850	Cebus_capucinus
ENSOGAG00000006882	PABPC5	99	96.850	ENSCATG00000043083	PABPC5	99	96.850	Cercocebus_atys
ENSOGAG00000006882	PABPC5	100	95.026	ENSCLAG00000000647	PABPC5	100	95.026	Chinchilla_lanigera
ENSOGAG00000006882	PABPC5	99	96.850	ENSCSAG00000000065	PABPC5	99	96.850	Chlorocebus_sabaeus
ENSOGAG00000006882	PABPC5	99	96.850	ENSCANG00000011473	PABPC5	99	96.850	Colobus_angolensis_palliatus
ENSOGAG00000006882	PABPC5	100	93.979	ENSCGRG00000018699	Pabpc5	100	93.979	Cricetulus_griseus_crigri
ENSOGAG00000006882	PABPC5	100	77.807	ENSETEG00000011832	PABPC5	100	77.807	Echinops_telfairi
ENSOGAG00000006882	PABPC5	100	96.335	ENSEASG00005014396	PABPC5	100	96.335	Equus_asinus_asinus
ENSOGAG00000006882	PABPC5	100	96.335	ENSECAG00000003452	PABPC5	100	96.335	Equus_caballus
ENSOGAG00000006882	PABPC5	100	96.335	ENSFCAG00000004998	PABPC5	100	96.335	Felis_catus
ENSOGAG00000006882	PABPC5	100	95.288	ENSFDAG00000000126	PABPC5	100	95.288	Fukomys_damarensis
ENSOGAG00000006882	PABPC5	99	96.850	ENSGGOG00000007622	PABPC5	99	96.850	Gorilla_gorilla
ENSOGAG00000006882	PABPC5	95	96.330	ENSJJAG00000011960	Pabpc5	100	96.330	Jaculus_jaculus
ENSOGAG00000006882	PABPC5	99	96.850	ENSMFAG00000024561	PABPC5	99	96.850	Macaca_fascicularis
ENSOGAG00000006882	PABPC5	99	96.850	ENSMMUG00000011562	PABPC5	99	96.850	Macaca_mulatta
ENSOGAG00000006882	PABPC5	99	96.850	ENSMNEG00000037604	PABPC5	99	96.850	Macaca_nemestrina
ENSOGAG00000006882	PABPC5	99	96.850	ENSMLEG00000028318	PABPC5	99	96.850	Mandrillus_leucophaeus
ENSOGAG00000006882	PABPC5	100	95.812	ENSMICG00000041706	PABPC5	100	95.812	Microcebus_murinus
ENSOGAG00000006882	PABPC5	100	94.503	ENSMOCG00000001554	Pabpc5	100	94.503	Microtus_ochrogaster
ENSOGAG00000006882	PABPC5	99	92.895	MGP_CAROLIEiJ_G0033367	Pabpc5	99	92.895	Mus_caroli
ENSOGAG00000006882	PABPC5	99	93.421	ENSMUSG00000034732	Pabpc5	99	93.421	Mus_musculus
ENSOGAG00000006882	PABPC5	100	93.717	MGP_PahariEiJ_G0031908	Pabpc5	100	93.717	Mus_pahari
ENSOGAG00000006882	PABPC5	99	93.421	MGP_SPRETEiJ_G0034533	Pabpc5	99	93.421	Mus_spretus
ENSOGAG00000006882	PABPC5	100	95.550	ENSMPUG00000018465	PABPC5	100	95.550	Mustela_putorius_furo
ENSOGAG00000006882	PABPC5	100	95.026	ENSMLUG00000008244	PABPC5	100	95.026	Myotis_lucifugus
ENSOGAG00000006882	PABPC5	95	95.413	ENSNGAG00000004371	Pabpc5	100	95.413	Nannospalax_galili
ENSOGAG00000006882	PABPC5	99	96.850	ENSNLEG00000035086	PABPC5	99	96.850	Nomascus_leucogenys
ENSOGAG00000006882	PABPC5	98	96.833	ENSOPRG00000000856	PABPC5	100	96.833	Ochotona_princeps
ENSOGAG00000006882	PABPC5	100	96.335	ENSOCUG00000010919	PABPC5	100	96.335	Oryctolagus_cuniculus
ENSOGAG00000006882	PABPC5	100	95.812	ENSOARG00000010260	PABPC5	100	95.812	Ovis_aries
ENSOGAG00000006882	PABPC5	99	96.850	ENSPPAG00000007378	PABPC5	99	96.850	Pan_paniscus
ENSOGAG00000006882	PABPC5	100	96.335	ENSPPRG00000010742	PABPC5	100	96.335	Panthera_pardus
ENSOGAG00000006882	PABPC5	100	96.335	ENSPTIG00000001480	PABPC5	100	96.335	Panthera_tigris_altaica
ENSOGAG00000006882	PABPC5	99	96.850	ENSPTRG00000022078	PABPC5	99	96.850	Pan_troglodytes
ENSOGAG00000006882	PABPC5	99	96.850	ENSPANG00000018282	PABPC5	99	96.850	Papio_anubis
ENSOGAG00000006882	PABPC5	100	94.503	ENSPEMG00000000171	Pabpc5	100	94.503	Peromyscus_maniculatus_bairdii
ENSOGAG00000006882	PABPC5	99	96.850	ENSPPYG00000020526	PABPC5	99	96.850	Pongo_abelii
ENSOGAG00000006882	PABPC5	99	96.727	ENSPCAG00000015577	PABPC5	100	96.727	Procavia_capensis
ENSOGAG00000006882	PABPC5	100	96.597	ENSPCOG00000000676	PABPC5	100	96.597	Propithecus_coquereli
ENSOGAG00000006882	PABPC5	100	96.073	ENSPVAG00000006465	PABPC5	100	96.073	Pteropus_vampyrus
ENSOGAG00000006882	PABPC5	100	94.503	ENSRNOG00000003354	Pabpc5	100	94.503	Rattus_norvegicus
ENSOGAG00000006882	PABPC5	99	96.850	ENSRBIG00000011760	PABPC5	99	96.850	Rhinopithecus_bieti
ENSOGAG00000006882	PABPC5	99	96.850	ENSRROG00000036708	PABPC5	99	96.850	Rhinopithecus_roxellana
ENSOGAG00000006882	PABPC5	99	96.588	ENSSBOG00000008658	PABPC5	99	96.588	Saimiri_boliviensis_boliviensis
ENSOGAG00000006882	PABPC5	100	93.717	ENSSARG00000014012	PABPC5	100	93.717	Sorex_araneus
ENSOGAG00000006882	PABPC5	100	95.812	ENSSSCG00000040194	PABPC5	100	95.812	Sus_scrofa
ENSOGAG00000006882	PABPC5	100	97.120	ENSTBEG00000016482	PABPC5	100	97.120	Tupaia_belangeri
ENSOGAG00000006882	PABPC5	100	96.073	ENSUAMG00000013627	PABPC5	100	96.073	Ursus_americanus
ENSOGAG00000006882	PABPC5	100	95.812	ENSUMAG00000023934	PABPC5	100	95.812	Ursus_maritimus
ENSOGAG00000006882	PABPC5	100	96.335	ENSVPAG00000001063	PABPC5	100	96.335	Vicugna_pacos
ENSOGAG00000006882	PABPC5	100	96.335	ENSVVUG00000013172	PABPC5	100	96.335	Vulpes_vulpes