EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000006951 (Gene tree)
Gene ID: 100947616
Gene Symbol: -
Alias: -
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 1258 bases
Position: chrGL873703.1:3034587-3035844
Accession: 100947616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000006219	MMR_HSR1	PF01926.23	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000006953	-	657	-	ENSOGAP00000006219	218 (aa)	XP_003800817	H0WV96

Gene Model

Click here to download ENSOGAG00000006951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000006951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000006951	-	78	39.884	ENSOGAG00000006778	RAB33B	73	39.306
ENSOGAG00000006951	-	87	36.634	ENSOGAG00000005245	RAB6B	94	36.634
ENSOGAG00000006951	-	94	39.806	ENSOGAG00000002728	-	92	39.806
ENSOGAG00000006951	-	77	41.176	ENSOGAG00000016969	-	80	41.176
ENSOGAG00000006951	-	81	37.222	ENSOGAG00000002868	RAB9A	85	37.222
ENSOGAG00000006951	-	63	35.507	ENSOGAG00000024846	HRAS	86	32.164
ENSOGAG00000006951	-	63	37.681	ENSOGAG00000028680	NRAS	86	33.918
ENSOGAG00000006951	-	74	32.317	ENSOGAG00000024221	REM1	55	31.765
ENSOGAG00000006951	-	100	35.135	ENSOGAG00000027043	RAB6A	100	35.135
ENSOGAG00000006951	-	97	34.419	ENSOGAG00000012973	RAB14	96	33.636
ENSOGAG00000006951	-	78	39.766	ENSOGAG00000016955	RAB25	77	39.766
ENSOGAG00000006951	-	82	39.106	ENSOGAG00000003227	RAB11B	93	35.814
ENSOGAG00000006951	-	80	35.227	ENSOGAG00000028133	RAB21	78	34.807
ENSOGAG00000006951	-	76	38.462	ENSOGAG00000033299	RAB33A	69	37.870
ENSOGAG00000006951	-	78	35.673	ENSOGAG00000002443	RAB15	77	35.088
ENSOGAG00000006951	-	78	37.427	ENSOGAG00000028015	RAB18	89	35.751
ENSOGAG00000006951	-	81	42.458	ENSOGAG00000028013	RAB1B	85	42.458
ENSOGAG00000006951	-	78	31.953	ENSOGAG00000014855	RAB31	84	31.953
ENSOGAG00000006951	-	79	37.791	ENSOGAG00000009456	RAB5C	91	34.314
ENSOGAG00000006951	-	78	32.759	ENSOGAG00000007885	RAB7A	81	32.759
ENSOGAG00000006951	-	81	41.899	ENSOGAG00000026181	RAB1A	83	41.899
ENSOGAG00000006951	-	79	33.146	ENSOGAG00000000096	RAB36	64	33.146
ENSOGAG00000006951	-	79	38.636	ENSOGAG00000015082	RAB9B	83	38.636
ENSOGAG00000006951	-	80	37.288	ENSOGAG00000028002	RAB12	80	36.364
ENSOGAG00000006951	-	81	40.341	ENSOGAG00000007642	RAB11A	78	40.341
ENSOGAG00000006951	-	57	32.000	ENSOGAG00000033920	ARL14	60	32.000
ENSOGAG00000006951	-	78	32.544	ENSOGAG00000015779	RAB22A	84	32.544
ENSOGAG00000006951	-	72	34.615	ENSOGAG00000014812	KRAS	74	31.746
ENSOGAG00000006951	-	87	46.032	ENSOGAG00000025424	RAB39B	86	46.032
ENSOGAG00000006951	-	80	39.080	ENSOGAG00000005675	RAB23	70	39.080
ENSOGAG00000006951	-	77	43.195	ENSOGAG00000033189	RAB30	79	43.195

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000006951	-	100	88.073	ENSANAG00000035487	-	100	88.073	Aotus_nancymaae
ENSOGAG00000006951	-	100	85.000	ENSBTAG00000021525	-	100	84.091	Bos_taurus
ENSOGAG00000006951	-	99	59.722	ENSCPBG00000011245	RAB42	99	60.766	Chrysemys_picta_bellii
ENSOGAG00000006951	-	100	78.082	ENSCGRG00001019426	Rab42	100	78.082	Cricetulus_griseus_chok1gshd
ENSOGAG00000006951	-	100	77.523	ENSDORG00000023607	Rab42	100	77.523	Dipodomys_ordii
ENSOGAG00000006951	-	100	86.239	ENSFCAG00000037124	-	100	86.239	Felis_catus
ENSOGAG00000006951	-	98	60.280	ENSGAGG00000004921	RAB42	99	60.476	Gopherus_agassizii
ENSOGAG00000006951	-	100	84.404	ENSSTOG00000000084	-	100	84.404	Ictidomys_tridecemlineatus
ENSOGAG00000006951	-	100	78.539	ENSMAUG00000020223	Rab42	100	78.539	Mesocricetus_auratus
ENSOGAG00000006951	-	100	92.661	ENSMICG00000029915	-	100	92.661	Microcebus_murinus
ENSOGAG00000006951	-	100	80.734	ENSMOCG00000021639	Rab42	100	80.734	Microtus_ochrogaster
ENSOGAG00000006951	-	97	64.623	ENSMODG00000023873	-	95	64.151	Monodelphis_domestica
ENSOGAG00000006951	-	100	81.651	ENSNGAG00000015676	Rab42	100	81.651	Nannospalax_galili
ENSOGAG00000006951	-	99	61.395	ENSPSIG00000006831	RAB42	94	61.395	Pelodiscus_sinensis
ENSOGAG00000006951	-	100	94.037	ENSPCOG00000008605	-	100	94.037	Propithecus_coquereli
ENSOGAG00000006951	-	96	81.429	ENSSARG00000007565	-	100	80.952	Sorex_araneus
ENSOGAG00000006951	-	98	60.648	ENSSPUG00000010337	RAB42	98	59.091	Sphenodon_punctatus
ENSOGAG00000006951	-	100	86.364	ENSSSCG00000030432	-	100	85.455	Sus_scrofa