EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000007197 (Gene tree)
Gene ID: 100949545
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 57178 bases
Position: chrGL873537.1:4154725-4211902
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000006444	Ago_hook	PF10427.9	8e-20	1	1
ENSOGAP00000006444	RRM_1	PF00076.22	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000007202	TNRC6C-201	5172	-	ENSOGAP00000006444	1723 (aa)	-	H0WVU1

Gene Model

Click here to download ENSOGAG00000007197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000007197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000007197	TNRC6C	93	37.633	ENSOGAG00000011096	TNRC6B	83	37.653
ENSOGAG00000007197	TNRC6C	99	42.928	ENSOGAG00000006666	TNRC6A	85	42.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000007197	TNRC6C	100	92.642	ENSG00000078687	TNRC6C	100	94.737	Homo_sapiens
ENSOGAG00000007197	TNRC6C	89	52.525	ENSAPOG00000019749	tnrc6c1	92	48.571	Acanthochromis_polyacanthus
ENSOGAG00000007197	TNRC6C	100	88.094	ENSAMEG00000013756	TNRC6C	96	87.979	Ailuropoda_melanoleuca
ENSOGAG00000007197	TNRC6C	91	52.180	ENSACIG00000008075	tnrc6c1	90	49.045	Amphilophus_citrinellus
ENSOGAG00000007197	TNRC6C	78	65.145	ENSAOCG00000023968	tnrc6c1	94	48.831	Amphiprion_ocellaris
ENSOGAG00000007197	TNRC6C	80	51.814	ENSAPEG00000009020	tnrc6c1	94	48.885	Amphiprion_percula
ENSOGAG00000007197	TNRC6C	100	85.493	ENSAPLG00000005456	TNRC6C	90	85.395	Anas_platyrhynchos
ENSOGAG00000007197	TNRC6C	100	85.929	ENSACAG00000016198	TNRC6C	88	85.582	Anolis_carolinensis
ENSOGAG00000007197	TNRC6C	100	91.748	ENSANAG00000021554	TNRC6C	100	90.451	Aotus_nancymaae
ENSOGAG00000007197	TNRC6C	100	48.832	ENSACLG00000000424	tnrc6c1	92	52.994	Astatotilapia_calliptera
ENSOGAG00000007197	TNRC6C	100	87.037	ENSBTAG00000018658	TNRC6C	100	87.269	Bos_taurus
ENSOGAG00000007197	TNRC6C	100	91.748	ENSCJAG00000019431	TNRC6C	100	90.104	Callithrix_jacchus
ENSOGAG00000007197	TNRC6C	100	90.209	ENSCAFG00000005224	TNRC6C	89	90.209	Canis_familiaris
ENSOGAG00000007197	TNRC6C	100	89.850	ENSCAFG00020006661	TNRC6C	100	87.138	Canis_lupus_dingo
ENSOGAG00000007197	TNRC6C	100	86.551	ENSCHIG00000026004	TNRC6C	100	84.380	Capra_hircus
ENSOGAG00000007197	TNRC6C	100	93.271	ENSTSYG00000005403	TNRC6C	100	93.271	Carlito_syrichta
ENSOGAG00000007197	TNRC6C	100	81.997	ENSCAPG00000007307	TNRC6C	89	82.275	Cavia_aperea
ENSOGAG00000007197	TNRC6C	100	87.703	ENSCPOG00000000467	TNRC6C	97	87.993	Cavia_porcellus
ENSOGAG00000007197	TNRC6C	100	93.101	ENSCCAG00000030524	TNRC6C	100	93.101	Cebus_capucinus
ENSOGAG00000007197	TNRC6C	100	93.159	ENSCATG00000033135	TNRC6C	100	93.159	Cercocebus_atys
ENSOGAG00000007197	TNRC6C	100	90.081	ENSCLAG00000011139	TNRC6C	89	90.023	Chinchilla_lanigera
ENSOGAG00000007197	TNRC6C	100	93.217	ENSCSAG00000005167	TNRC6C	89	93.217	Chlorocebus_sabaeus
ENSOGAG00000007197	TNRC6C	76	87.395	ENSCHOG00000000088	TNRC6C	72	87.395	Choloepus_hoffmanni
ENSOGAG00000007197	TNRC6C	100	84.491	ENSCPBG00000027960	TNRC6C	100	84.722	Chrysemys_picta_bellii
ENSOGAG00000007197	TNRC6C	100	92.754	ENSCANG00000041771	TNRC6C	100	92.754	Colobus_angolensis_palliatus
ENSOGAG00000007197	TNRC6C	100	87.940	ENSCGRG00001022686	Tnrc6c	100	86.844	Cricetulus_griseus_chok1gshd
ENSOGAG00000007197	TNRC6C	100	88.348	ENSCGRG00000018041	Tnrc6c	100	86.844	Cricetulus_griseus_crigri
ENSOGAG00000007197	TNRC6C	80	50.612	ENSCSEG00000012744	tnrc6c1	90	46.931	Cynoglossus_semilaevis
ENSOGAG00000007197	TNRC6C	100	53.265	ENSDARG00000076847	tnrc6c1	84	58.375	Danio_rerio
ENSOGAG00000007197	TNRC6C	100	90.162	ENSDNOG00000003247	TNRC6C	91	89.931	Dasypus_novemcinctus
ENSOGAG00000007197	TNRC6C	100	85.179	ENSDORG00000004558	Tnrc6c	100	85.063	Dipodomys_ordii
ENSOGAG00000007197	TNRC6C	90	78.283	ENSETEG00000005527	TNRC6C	87	78.283	Echinops_telfairi
ENSOGAG00000007197	TNRC6C	100	87.536	ENSEASG00005004799	TNRC6C	100	88.000	Equus_asinus_asinus
ENSOGAG00000007197	TNRC6C	100	89.565	ENSECAG00000012486	TNRC6C	90	89.739	Equus_caballus
ENSOGAG00000007197	TNRC6C	96	89.649	ENSEEUG00000010008	TNRC6C	93	91.128	Erinaceus_europaeus
ENSOGAG00000007197	TNRC6C	100	87.903	ENSFCAG00000028358	TNRC6C	100	86.135	Felis_catus
ENSOGAG00000007197	TNRC6C	100	85.585	ENSFALG00000000848	TNRC6C	100	84.847	Ficedula_albicollis
ENSOGAG00000007197	TNRC6C	100	89.153	ENSFDAG00000010368	TNRC6C	97	89.507	Fukomys_damarensis
ENSOGAG00000007197	TNRC6C	89	66.719	ENSFHEG00000002936	tnrc6c1	92	49.301	Fundulus_heteroclitus
ENSOGAG00000007197	TNRC6C	100	87.188	ENSGALG00000001725	TNRC6C	100	84.986	Gallus_gallus
ENSOGAG00000007197	TNRC6C	100	48.285	ENSGAFG00000019019	tnrc6c1	97	48.679	Gambusia_affinis
ENSOGAG00000007197	TNRC6C	80	51.638	ENSGACG00000012320	tnrc6c1	86	47.389	Gasterosteus_aculeatus
ENSOGAG00000007197	TNRC6C	100	86.235	ENSGAGG00000022043	TNRC6C	96	85.888	Gopherus_agassizii
ENSOGAG00000007197	TNRC6C	100	92.584	ENSGGOG00000011304	TNRC6C	100	92.526	Gorilla_gorilla
ENSOGAG00000007197	TNRC6C	100	49.021	ENSHBUG00000010846	tnrc6c1	91	53.296	Haplochromis_burtoni
ENSOGAG00000007197	TNRC6C	100	89.791	ENSHGLG00000004809	TNRC6C	89	89.733	Heterocephalus_glaber_female
ENSOGAG00000007197	TNRC6C	100	89.030	ENSHGLG00100012597	TNRC6C	89	89.030	Heterocephalus_glaber_male
ENSOGAG00000007197	TNRC6C	94	52.518	ENSIPUG00000000818	tnrc6c1	89	51.350	Ictalurus_punctatus
ENSOGAG00000007197	TNRC6C	100	88.188	ENSSTOG00000009101	TNRC6C	97	88.072	Ictidomys_tridecemlineatus
ENSOGAG00000007197	TNRC6C	100	86.613	ENSJJAG00000017055	Tnrc6c	89	86.267	Jaculus_jaculus
ENSOGAG00000007197	TNRC6C	94	49.701	ENSKMAG00000021023	tnrc6c1	97	48.899	Kryptolebias_marmoratus
ENSOGAG00000007197	TNRC6C	100	72.659	ENSLACG00000015283	TNRC6C	97	72.915	Latimeria_chalumnae
ENSOGAG00000007197	TNRC6C	99	55.263	ENSLOCG00000013377	tnrc6c1	87	56.065	Lepisosteus_oculatus
ENSOGAG00000007197	TNRC6C	100	87.644	ENSLAFG00000011122	TNRC6C	96	85.247	Loxodonta_africana
ENSOGAG00000007197	TNRC6C	100	93.159	ENSMFAG00000043943	TNRC6C	100	93.159	Macaca_fascicularis
ENSOGAG00000007197	TNRC6C	100	93.159	ENSMMUG00000011924	TNRC6C	100	90.683	Macaca_mulatta
ENSOGAG00000007197	TNRC6C	100	92.672	ENSMNEG00000030405	TNRC6C	100	90.625	Macaca_nemestrina
ENSOGAG00000007197	TNRC6C	100	93.159	ENSMLEG00000033436	TNRC6C	100	93.159	Mandrillus_leucophaeus
ENSOGAG00000007197	TNRC6C	88	53.911	ENSMAMG00000023613	tnrc6c1	86	53.571	Mastacembelus_armatus
ENSOGAG00000007197	TNRC6C	100	48.832	ENSMZEG00005010920	tnrc6c1	92	52.994	Maylandia_zebra
ENSOGAG00000007197	TNRC6C	100	78.739	ENSMGAG00000003906	TNRC6C	90	78.887	Meleagris_gallopavo
ENSOGAG00000007197	TNRC6C	100	87.363	ENSMAUG00000021618	Tnrc6c	100	87.248	Mesocricetus_auratus
ENSOGAG00000007197	TNRC6C	100	94.261	ENSMICG00000003952	TNRC6C	100	94.551	Microcebus_murinus
ENSOGAG00000007197	TNRC6C	100	89.449	ENSMOCG00000015879	Tnrc6c	97	89.333	Microtus_ochrogaster
ENSOGAG00000007197	TNRC6C	93	52.854	ENSMMOG00000005203	tnrc6c1	97	48.542	Mola_mola
ENSOGAG00000007197	TNRC6C	100	83.573	ENSMODG00000001785	TNRC6C	89	83.170	Monodelphis_domestica
ENSOGAG00000007197	TNRC6C	100	89.217	MGP_CAROLIEiJ_G0017465	Tnrc6c	97	89.101	Mus_caroli
ENSOGAG00000007197	TNRC6C	100	88.870	ENSMUSG00000025571	Tnrc6c	97	88.754	Mus_musculus
ENSOGAG00000007197	TNRC6C	100	88.986	MGP_PahariEiJ_G0018593	Tnrc6c	97	88.870	Mus_pahari
ENSOGAG00000007197	TNRC6C	100	88.928	MGP_SPRETEiJ_G0018309	Tnrc6c	97	88.812	Mus_spretus
ENSOGAG00000007197	TNRC6C	100	87.826	ENSMPUG00000013348	TNRC6C	88	88.181	Mustela_putorius_furo
ENSOGAG00000007197	TNRC6C	100	81.662	ENSMLUG00000014431	TNRC6C	88	81.730	Myotis_lucifugus
ENSOGAG00000007197	TNRC6C	100	88.048	ENSNGAG00000012203	Tnrc6c	89	87.933	Nannospalax_galili
ENSOGAG00000007197	TNRC6C	100	49.271	ENSNBRG00000005344	tnrc6c1	92	53.214	Neolamprologus_brichardi
ENSOGAG00000007197	TNRC6C	100	89.786	ENSNLEG00000000047	TNRC6C	89	89.671	Nomascus_leucogenys
ENSOGAG00000007197	TNRC6C	98	77.429	ENSMEUG00000005104	TNRC6C	96	89.062	Notamacropus_eugenii
ENSOGAG00000007197	TNRC6C	100	89.559	ENSODEG00000012499	TNRC6C	100	89.733	Octodon_degus
ENSOGAG00000007197	TNRC6C	94	48.926	ENSONIG00000002210	tnrc6c1	95	50.956	Oreochromis_niloticus
ENSOGAG00000007197	TNRC6C	99	61.397	ENSOANG00000009758	-	84	63.642	Ornithorhynchus_anatinus
ENSOGAG00000007197	TNRC6C	79	86.420	ENSOCUG00000006122	TNRC6C	83	71.558	Oryctolagus_cuniculus
ENSOGAG00000007197	TNRC6C	92	47.750	ENSORLG00000009837	tnrc6c1	100	66.171	Oryzias_latipes
ENSOGAG00000007197	TNRC6C	92	48.767	ENSORLG00020016510	tnrc6c1	100	47.248	Oryzias_latipes_hni
ENSOGAG00000007197	TNRC6C	70	43.858	ENSORLG00015000171	tnrc6c1	98	42.649	Oryzias_latipes_hsok
ENSOGAG00000007197	TNRC6C	92	49.610	ENSOMEG00000000357	tnrc6c1	94	47.769	Oryzias_melastigma
ENSOGAG00000007197	TNRC6C	96	83.889	ENSOARG00000006041	TNRC6C	87	84.117	Ovis_aries
ENSOGAG00000007197	TNRC6C	100	92.986	ENSPPAG00000027160	TNRC6C	100	92.986	Pan_paniscus
ENSOGAG00000007197	TNRC6C	100	87.903	ENSPPRG00000018881	TNRC6C	100	86.135	Panthera_pardus
ENSOGAG00000007197	TNRC6C	90	86.900	ENSPTIG00000008791	TNRC6C	69	71.770	Panthera_tigris_altaica
ENSOGAG00000007197	TNRC6C	100	92.986	ENSPTRG00000009699	TNRC6C	100	92.986	Pan_troglodytes
ENSOGAG00000007197	TNRC6C	100	92.729	ENSPANG00000019994	TNRC6C	100	90.841	Papio_anubis
ENSOGAG00000007197	TNRC6C	96	52.592	ENSPKIG00000005428	tnrc6c1	98	51.256	Paramormyrops_kingsleyae
ENSOGAG00000007197	TNRC6C	100	82.418	ENSPSIG00000018069	TNRC6C	97	82.591	Pelodiscus_sinensis
ENSOGAG00000007197	TNRC6C	80	57.082	ENSPMGG00000022911	tnrc6c1	97	62.041	Periophthalmus_magnuspinnatus
ENSOGAG00000007197	TNRC6C	100	88.632	ENSPEMG00000009785	Tnrc6c	100	86.209	Peromyscus_maniculatus_bairdii
ENSOGAG00000007197	TNRC6C	56	83.128	ENSPCIG00000017421	-	99	83.128	Phascolarctos_cinereus
ENSOGAG00000007197	TNRC6C	100	48.399	ENSPFOG00000012560	tnrc6c1	98	55.137	Poecilia_formosa
ENSOGAG00000007197	TNRC6C	97	50.494	ENSPLAG00000021055	tnrc6c1	97	50.349	Poecilia_latipinna
ENSOGAG00000007197	TNRC6C	100	93.217	ENSPPYG00000008679	TNRC6C	88	93.217	Pongo_abelii
ENSOGAG00000007197	TNRC6C	89	87.981	ENSPCAG00000012510	TNRC6C	87	88.372	Procavia_capensis
ENSOGAG00000007197	TNRC6C	100	95.014	ENSPCOG00000021451	TNRC6C	100	95.362	Propithecus_coquereli
ENSOGAG00000007197	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	93	88.983	Pteropus_vampyrus
ENSOGAG00000007197	TNRC6C	100	48.438	ENSPNYG00000014477	tnrc6c1	95	50.067	Pundamilia_nyererei
ENSOGAG00000007197	TNRC6C	100	88.361	ENSRNOG00000022395	Tnrc6c	100	88.188	Rattus_norvegicus
ENSOGAG00000007197	TNRC6C	100	93.101	ENSRBIG00000027777	TNRC6C	100	93.101	Rhinopithecus_bieti
ENSOGAG00000007197	TNRC6C	100	93.101	ENSRROG00000042912	TNRC6C	100	93.101	Rhinopithecus_roxellana
ENSOGAG00000007197	TNRC6C	100	92.580	ENSSBOG00000023981	TNRC6C	100	92.580	Saimiri_boliviensis_boliviensis
ENSOGAG00000007197	TNRC6C	54	88.312	ENSSHAG00000018330	-	100	88.203	Sarcophilus_harrisii
ENSOGAG00000007197	TNRC6C	54	56.144	ENSSFOG00015004735	-	99	59.000	Scleropages_formosus
ENSOGAG00000007197	TNRC6C	94	55.625	ENSSFOG00015006475	tnrc6c1	77	54.913	Scleropages_formosus
ENSOGAG00000007197	TNRC6C	100	46.982	ENSSMAG00000012761	tnrc6c1	99	48.154	Scophthalmus_maximus
ENSOGAG00000007197	TNRC6C	94	49.552	ENSSDUG00000002366	tnrc6c1	90	49.740	Seriola_dumerili
ENSOGAG00000007197	TNRC6C	94	47.995	ENSSLDG00000025613	tnrc6c1	97	48.459	Seriola_lalandi_dorsalis
ENSOGAG00000007197	TNRC6C	91	88.235	ENSSARG00000006816	TNRC6C	88	88.235	Sorex_araneus
ENSOGAG00000007197	TNRC6C	83	85.198	ENSSPUG00000007341	TNRC6C	91	84.781	Sphenodon_punctatus
ENSOGAG00000007197	TNRC6C	79	52.774	ENSSPAG00000014977	tnrc6c1	89	49.550	Stegastes_partitus
ENSOGAG00000007197	TNRC6C	97	87.743	ENSSSCG00000034373	TNRC6C	100	92.208	Sus_scrofa
ENSOGAG00000007197	TNRC6C	100	84.962	ENSTGUG00000007733	TNRC6C	97	84.731	Taeniopygia_guttata
ENSOGAG00000007197	TNRC6C	79	53.061	ENSTRUG00000011685	tnrc6c1	97	48.719	Takifugu_rubripes
ENSOGAG00000007197	TNRC6C	95	52.479	ENSTNIG00000005273	tnrc6c1	100	59.256	Tetraodon_nigroviridis
ENSOGAG00000007197	TNRC6C	65	83.859	ENSTBEG00000005046	TNRC6C	95	83.738	Tupaia_belangeri
ENSOGAG00000007197	TNRC6C	100	87.334	ENSTTRG00000010828	TNRC6C	97	87.796	Tursiops_truncatus
ENSOGAG00000007197	TNRC6C	100	89.331	ENSUMAG00000013614	TNRC6C	90	89.216	Ursus_maritimus
ENSOGAG00000007197	TNRC6C	53	75.328	ENSVPAG00000006765	-	99	75.192	Vicugna_pacos
ENSOGAG00000007197	TNRC6C	100	88.586	ENSVVUG00000015268	TNRC6C	100	88.528	Vulpes_vulpes
ENSOGAG00000007197	TNRC6C	100	72.225	ENSXETG00000019470	tnrc6c	100	71.650	Xenopus_tropicalis
ENSOGAG00000007197	TNRC6C	100	48.284	ENSXMAG00000025971	tnrc6c1	97	48.394	Xiphophorus_maculatus