EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000008390 (Gene tree)
Gene ID: 100948895
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 39672 bases
Position: chrGL873536.1:6725972-6765643
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000007515	MRP-S27	PF10037.9	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000008393	PTCD2-201	1167	-	ENSOGAP00000007515	388 (aa)	-	H0WYD4

Gene Model

Click here to download ENSOGAG00000008390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000008390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000008390	PTCD2	99	76.486	ENSG00000049883	PTCD2	100	77.778	Homo_sapiens
ENSOGAG00000008390	PTCD2	90	47.701	ENSAPOG00000020682	ptcd2	91	47.701	Acanthochromis_polyacanthus
ENSOGAG00000008390	PTCD2	99	75.844	ENSAMEG00000007194	PTCD2	99	75.844	Ailuropoda_melanoleuca
ENSOGAG00000008390	PTCD2	89	42.980	ENSACIG00000002053	ptcd2	100	42.980	Amphilophus_citrinellus
ENSOGAG00000008390	PTCD2	90	47.414	ENSAOCG00000006616	ptcd2	89	47.414	Amphiprion_ocellaris
ENSOGAG00000008390	PTCD2	90	47.414	ENSAPEG00000022926	ptcd2	89	47.414	Amphiprion_percula
ENSOGAG00000008390	PTCD2	99	53.906	ENSACAG00000009747	PTCD2	98	53.906	Anolis_carolinensis
ENSOGAG00000008390	PTCD2	99	74.677	ENSANAG00000029353	PTCD2	99	74.677	Aotus_nancymaae
ENSOGAG00000008390	PTCD2	90	46.264	ENSACLG00000027742	ptcd2	89	46.264	Astatotilapia_calliptera
ENSOGAG00000008390	PTCD2	93	42.061	ENSAMXG00000029404	ptcd2	94	42.061	Astyanax_mexicanus
ENSOGAG00000008390	PTCD2	99	73.958	ENSBTAG00000014675	PTCD2	100	73.958	Bos_taurus
ENSOGAG00000008390	PTCD2	99	74.160	ENSCJAG00000016364	PTCD2	99	74.160	Callithrix_jacchus
ENSOGAG00000008390	PTCD2	99	74.805	ENSCAFG00000007982	PTCD2	90	74.805	Canis_familiaris
ENSOGAG00000008390	PTCD2	89	77.457	ENSCAFG00020019147	PTCD2	97	77.457	Canis_lupus_dingo
ENSOGAG00000008390	PTCD2	99	75.260	ENSCHIG00000017118	PTCD2	100	75.260	Capra_hircus
ENSOGAG00000008390	PTCD2	99	70.235	ENSCPOG00000040168	PTCD2	100	70.235	Cavia_porcellus
ENSOGAG00000008390	PTCD2	82	68.868	ENSCCAG00000021996	-	98	68.868	Cebus_capucinus
ENSOGAG00000008390	PTCD2	99	74.160	ENSCCAG00000029389	-	99	74.160	Cebus_capucinus
ENSOGAG00000008390	PTCD2	99	74.413	ENSCATG00000019069	PTCD2	100	74.413	Cercocebus_atys
ENSOGAG00000008390	PTCD2	99	70.496	ENSCLAG00000000072	PTCD2	100	70.496	Chinchilla_lanigera
ENSOGAG00000008390	PTCD2	99	74.413	ENSCSAG00000015623	PTCD2	100	74.413	Chlorocebus_sabaeus
ENSOGAG00000008390	PTCD2	89	57.759	ENSCHOG00000010634	PTCD2	100	57.759	Choloepus_hoffmanni
ENSOGAG00000008390	PTCD2	99	54.145	ENSCPBG00000000216	PTCD2	99	54.145	Chrysemys_picta_bellii
ENSOGAG00000008390	PTCD2	99	73.902	ENSCANG00000035636	PTCD2	99	73.902	Colobus_angolensis_palliatus
ENSOGAG00000008390	PTCD2	99	70.984	ENSCGRG00001015289	Ptcd2	84	70.984	Cricetulus_griseus_chok1gshd
ENSOGAG00000008390	PTCD2	99	70.984	ENSCGRG00000006193	Ptcd2	84	70.984	Cricetulus_griseus_crigri
ENSOGAG00000008390	PTCD2	95	44.103	ENSCVAG00000001285	ptcd2	99	44.103	Cyprinodon_variegatus
ENSOGAG00000008390	PTCD2	93	44.722	ENSDARG00000035391	ptcd2	94	44.722	Danio_rerio
ENSOGAG00000008390	PTCD2	99	73.890	ENSDNOG00000008719	PTCD2	100	73.890	Dasypus_novemcinctus
ENSOGAG00000008390	PTCD2	99	75.194	ENSDORG00000004921	Ptcd2	100	75.194	Dipodomys_ordii
ENSOGAG00000008390	PTCD2	100	66.067	ENSETEG00000016542	PTCD2	100	66.067	Echinops_telfairi
ENSOGAG00000008390	PTCD2	99	73.368	ENSEASG00005018038	PTCD2	100	73.368	Equus_asinus_asinus
ENSOGAG00000008390	PTCD2	99	73.177	ENSECAG00000007022	PTCD2	99	73.177	Equus_caballus
ENSOGAG00000008390	PTCD2	99	67.708	ENSEEUG00000014031	PTCD2	99	67.708	Erinaceus_europaeus
ENSOGAG00000008390	PTCD2	93	48.056	ENSELUG00000003584	ptcd2	94	48.056	Esox_lucius
ENSOGAG00000008390	PTCD2	99	67.442	ENSFCAG00000045432	PTCD2	83	67.442	Felis_catus
ENSOGAG00000008390	PTCD2	84	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSOGAG00000008390	PTCD2	99	71.540	ENSFDAG00000018461	PTCD2	100	71.540	Fukomys_damarensis
ENSOGAG00000008390	PTCD2	90	49.573	ENSGMOG00000003637	ptcd2	91	49.573	Gadus_morhua
ENSOGAG00000008390	PTCD2	92	49.157	ENSGALG00000038260	PTCD2	93	49.157	Gallus_gallus
ENSOGAG00000008390	PTCD2	99	56.477	ENSGAGG00000021952	PTCD2	99	56.477	Gopherus_agassizii
ENSOGAG00000008390	PTCD2	99	76.486	ENSGGOG00000010695	PTCD2	99	76.486	Gorilla_gorilla
ENSOGAG00000008390	PTCD2	90	46.264	ENSHBUG00000009191	ptcd2	89	46.264	Haplochromis_burtoni
ENSOGAG00000008390	PTCD2	99	71.059	ENSHGLG00000001234	PTCD2	100	71.059	Heterocephalus_glaber_female
ENSOGAG00000008390	PTCD2	99	70.801	ENSHGLG00100015419	PTCD2	100	70.801	Heterocephalus_glaber_male
ENSOGAG00000008390	PTCD2	90	47.278	ENSHCOG00000001703	ptcd2	90	47.278	Hippocampus_comes
ENSOGAG00000008390	PTCD2	87	42.857	ENSIPUG00000006080	ptcd2	91	43.714	Ictalurus_punctatus
ENSOGAG00000008390	PTCD2	98	74.803	ENSSTOG00000006596	PTCD2	99	74.803	Ictidomys_tridecemlineatus
ENSOGAG00000008390	PTCD2	99	71.802	ENSJJAG00000024388	Ptcd2	100	71.802	Jaculus_jaculus
ENSOGAG00000008390	PTCD2	97	43.085	ENSKMAG00000009329	ptcd2	98	43.085	Kryptolebias_marmoratus
ENSOGAG00000008390	PTCD2	89	47.688	ENSLBEG00000024871	ptcd2	88	47.688	Labrus_bergylta
ENSOGAG00000008390	PTCD2	93	55.125	ENSLOCG00000011122	ptcd2	94	55.125	Lepisosteus_oculatus
ENSOGAG00000008390	PTCD2	80	76.527	ENSLAFG00000004115	PTCD2	100	76.527	Loxodonta_africana
ENSOGAG00000008390	PTCD2	99	74.935	ENSMFAG00000031516	PTCD2	99	74.935	Macaca_fascicularis
ENSOGAG00000008390	PTCD2	99	74.674	ENSMNEG00000007537	PTCD2	100	74.674	Macaca_nemestrina
ENSOGAG00000008390	PTCD2	99	74.677	ENSMLEG00000031093	PTCD2	99	74.677	Mandrillus_leucophaeus
ENSOGAG00000008390	PTCD2	90	49.425	ENSMAMG00000018529	ptcd2	91	49.425	Mastacembelus_armatus
ENSOGAG00000008390	PTCD2	90	46.264	ENSMZEG00005003625	ptcd2	89	46.264	Maylandia_zebra
ENSOGAG00000008390	PTCD2	90	49.713	ENSMGAG00000005033	PTCD2	100	49.713	Meleagris_gallopavo
ENSOGAG00000008390	PTCD2	99	53.003	ENSMAUG00000020253	Ptcd2	100	53.003	Mesocricetus_auratus
ENSOGAG00000008390	PTCD2	100	81.701	ENSMICG00000004535	PTCD2	100	81.701	Microcebus_murinus
ENSOGAG00000008390	PTCD2	99	71.279	ENSMOCG00000019985	Ptcd2	100	71.279	Microtus_ochrogaster
ENSOGAG00000008390	PTCD2	91	60.623	ENSMODG00000001695	PTCD2	92	60.623	Monodelphis_domestica
ENSOGAG00000008390	PTCD2	90	47.701	ENSMALG00000022372	ptcd2	91	47.701	Monopterus_albus
ENSOGAG00000008390	PTCD2	99	70.757	MGP_CAROLIEiJ_G0018829	Ptcd2	100	70.757	Mus_caroli
ENSOGAG00000008390	PTCD2	99	69.452	ENSMUSG00000021650	Ptcd2	100	69.452	Mus_musculus
ENSOGAG00000008390	PTCD2	99	72.324	MGP_PahariEiJ_G0015904	Ptcd2	100	72.324	Mus_pahari
ENSOGAG00000008390	PTCD2	99	70.235	MGP_SPRETEiJ_G0019711	Ptcd2	100	70.235	Mus_spretus
ENSOGAG00000008390	PTCD2	99	74.674	ENSMPUG00000014401	PTCD2	100	74.674	Mustela_putorius_furo
ENSOGAG00000008390	PTCD2	99	74.352	ENSMLUG00000007374	PTCD2	99	74.352	Myotis_lucifugus
ENSOGAG00000008390	PTCD2	94	72.603	ENSNGAG00000005027	Ptcd2	95	72.603	Nannospalax_galili
ENSOGAG00000008390	PTCD2	98	44.063	ENSNBRG00000008174	ptcd2	96	44.063	Neolamprologus_brichardi
ENSOGAG00000008390	PTCD2	85	45.758	ENSNBRG00000000092	-	100	45.758	Neolamprologus_brichardi
ENSOGAG00000008390	PTCD2	99	74.677	ENSNLEG00000004516	PTCD2	99	74.677	Nomascus_leucogenys
ENSOGAG00000008390	PTCD2	81	53.035	ENSMEUG00000014012	-	82	53.035	Notamacropus_eugenii
ENSOGAG00000008390	PTCD2	99	70.026	ENSOPRG00000007290	PTCD2	99	70.026	Ochotona_princeps
ENSOGAG00000008390	PTCD2	99	69.974	ENSODEG00000016417	PTCD2	100	69.974	Octodon_degus
ENSOGAG00000008390	PTCD2	82	44.688	ENSONIG00000011269	ptcd2	91	44.688	Oreochromis_niloticus
ENSOGAG00000008390	PTCD2	94	76.712	ENSOCUG00000007970	PTCD2	100	74.935	Oryctolagus_cuniculus
ENSOGAG00000008390	PTCD2	89	46.821	ENSORLG00000003851	ptcd2	88	46.821	Oryzias_latipes
ENSOGAG00000008390	PTCD2	89	45.954	ENSORLG00020009823	ptcd2	90	45.954	Oryzias_latipes_hni
ENSOGAG00000008390	PTCD2	90	45.714	ENSORLG00015016777	ptcd2	99	45.714	Oryzias_latipes_hsok
ENSOGAG00000008390	PTCD2	98	44.591	ENSOMEG00000012396	ptcd2	89	44.591	Oryzias_melastigma
ENSOGAG00000008390	PTCD2	99	74.419	ENSOARG00000005087	PTCD2	99	74.419	Ovis_aries
ENSOGAG00000008390	PTCD2	99	76.486	ENSPPAG00000028480	PTCD2	99	76.486	Pan_paniscus
ENSOGAG00000008390	PTCD2	99	76.227	ENSPTRG00000016968	PTCD2	99	76.227	Pan_troglodytes
ENSOGAG00000008390	PTCD2	89	76.522	ENSPANG00000006611	PTCD2	89	76.522	Papio_anubis
ENSOGAG00000008390	PTCD2	91	48.324	ENSPKIG00000019896	ptcd2	93	48.324	Paramormyrops_kingsleyae
ENSOGAG00000008390	PTCD2	83	58.204	ENSPSIG00000014559	PTCD2	99	58.204	Pelodiscus_sinensis
ENSOGAG00000008390	PTCD2	99	71.429	ENSPEMG00000000884	Ptcd2	100	71.429	Peromyscus_maniculatus_bairdii
ENSOGAG00000008390	PTCD2	92	60.335	ENSPCIG00000029047	PTCD2	93	60.335	Phascolarctos_cinereus
ENSOGAG00000008390	PTCD2	90	45.977	ENSPLAG00000010456	ptcd2	91	45.977	Poecilia_latipinna
ENSOGAG00000008390	PTCD2	90	45.690	ENSPREG00000021797	ptcd2	88	45.690	Poecilia_reticulata
ENSOGAG00000008390	PTCD2	100	67.784	ENSPPYG00000015543	PTCD2	100	67.784	Pongo_abelii
ENSOGAG00000008390	PTCD2	80	62.500	ENSPCAG00000006806	PTCD2	99	62.500	Procavia_capensis
ENSOGAG00000008390	PTCD2	99	74.352	ENSPVAG00000010935	PTCD2	99	74.352	Pteropus_vampyrus
ENSOGAG00000008390	PTCD2	90	45.977	ENSPNYG00000003122	ptcd2	89	45.977	Pundamilia_nyererei
ENSOGAG00000008390	PTCD2	93	46.133	ENSPNAG00000021490	ptcd2	94	46.409	Pygocentrus_nattereri
ENSOGAG00000008390	PTCD2	99	73.107	ENSRNOG00000028403	Ptcd2	100	73.107	Rattus_norvegicus
ENSOGAG00000008390	PTCD2	99	69.767	ENSRBIG00000032929	PTCD2	99	69.767	Rhinopithecus_bieti
ENSOGAG00000008390	PTCD2	99	74.674	ENSRROG00000000080	PTCD2	100	74.674	Rhinopithecus_roxellana
ENSOGAG00000008390	PTCD2	99	72.846	ENSSBOG00000018911	PTCD2	100	72.846	Saimiri_boliviensis_boliviensis
ENSOGAG00000008390	PTCD2	99	58.854	ENSSHAG00000003833	PTCD2	99	58.854	Sarcophilus_harrisii
ENSOGAG00000008390	PTCD2	93	45.278	ENSSFOG00015015415	ptcd2	93	45.278	Scleropages_formosus
ENSOGAG00000008390	PTCD2	89	45.533	ENSSMAG00000010350	ptcd2	90	45.533	Scophthalmus_maximus
ENSOGAG00000008390	PTCD2	89	49.856	ENSSDUG00000008142	ptcd2	87	49.856	Seriola_dumerili
ENSOGAG00000008390	PTCD2	89	49.568	ENSSLDG00000015284	ptcd2	91	49.568	Seriola_lalandi_dorsalis
ENSOGAG00000008390	PTCD2	80	65.806	ENSSARG00000004983	PTCD2	99	65.806	Sorex_araneus
ENSOGAG00000008390	PTCD2	99	51.562	ENSSPUG00000000176	PTCD2	96	51.562	Sphenodon_punctatus
ENSOGAG00000008390	PTCD2	90	47.126	ENSSPAG00000008591	ptcd2	89	47.126	Stegastes_partitus
ENSOGAG00000008390	PTCD2	99	75.584	ENSSSCG00000016975	PTCD2	90	75.584	Sus_scrofa
ENSOGAG00000008390	PTCD2	89	50.435	ENSTGUG00000005705	PTCD2	99	50.435	Taeniopygia_guttata
ENSOGAG00000008390	PTCD2	100	72.680	ENSTBEG00000016559	PTCD2	100	72.680	Tupaia_belangeri
ENSOGAG00000008390	PTCD2	100	73.779	ENSTTRG00000011851	PTCD2	100	73.779	Tursiops_truncatus
ENSOGAG00000008390	PTCD2	99	75.065	ENSUAMG00000007583	PTCD2	90	75.065	Ursus_americanus
ENSOGAG00000008390	PTCD2	99	74.674	ENSUMAG00000007666	PTCD2	100	74.674	Ursus_maritimus
ENSOGAG00000008390	PTCD2	99	74.677	ENSVPAG00000009597	PTCD2	99	74.677	Vicugna_pacos
ENSOGAG00000008390	PTCD2	99	74.674	ENSVVUG00000007299	-	100	74.674	Vulpes_vulpes
ENSOGAG00000008390	PTCD2	96	49.733	ENSXETG00000031652	PTCD2	96	49.733	Xenopus_tropicalis
ENSOGAG00000008390	PTCD2	90	45.115	ENSXMAG00000005940	ptcd2	82	45.115	Xiphophorus_maculatus