EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000009059 (Gene tree)
Gene ID: -
Gene Symbol: LSM11
Alias: -
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 3786 bases
Position: chrGL873522.1:18727468-18731253
Accession: 30860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000008124	LSM	PF01423.22	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000009063	LSM11-201	636	-	ENSOGAP00000008124	211 (aa)	-	H0WZT4

Gene Model

Click here to download ENSOGAG00000009059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000009059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000009059	LSM11	99	97.619	ENSCAPG00000009739	LSM11	100	97.619	Cavia_aperea
ENSOGAG00000009059	LSM11	100	97.156	ENSCPOG00000000906	LSM11	99	97.156	Cavia_porcellus
ENSOGAG00000009059	LSM11	100	97.156	ENSCLAG00000017067	LSM11	91	97.156	Chinchilla_lanigera
ENSOGAG00000009059	LSM11	99	94.762	ENSCHOG00000010946	LSM11	100	94.762	Choloepus_hoffmanni
ENSOGAG00000009059	LSM11	99	97.143	ENSCANG00000040781	LSM11	100	97.143	Colobus_angolensis_palliatus
ENSOGAG00000009059	LSM11	100	97.156	ENSCGRG00000000197	Lsm11	95	97.156	Cricetulus_griseus_crigri
ENSOGAG00000009059	LSM11	97	39.024	ENSCSEG00000019951	lsm11	50	39.024	Cynoglossus_semilaevis
ENSOGAG00000009059	LSM11	99	96.667	ENSEEUG00000010814	LSM11	100	96.667	Erinaceus_europaeus
ENSOGAG00000009059	LSM11	99	97.619	ENSMLEG00000027420	LSM11	100	97.619	Mandrillus_leucophaeus
ENSOGAG00000009059	LSM11	98	40.580	ENSMMOG00000009365	lsm11	50	39.614	Mola_mola
ENSOGAG00000009059	LSM11	100	72.986	ENSMLUG00000015930	LSM11	96	72.986	Myotis_lucifugus
ENSOGAG00000009059	LSM11	100	62.385	ENSPSIG00000005234	LSM11	100	62.385	Pelodiscus_sinensis
ENSOGAG00000009059	LSM11	98	41.262	ENSPLAG00000019434	lsm11	50	41.262	Poecilia_latipinna
ENSOGAG00000009059	LSM11	100	94.313	ENSPCAG00000016360	LSM11	99	94.313	Procavia_capensis
ENSOGAG00000009059	LSM11	99	99.048	ENSTBEG00000000992	LSM11	100	99.048	Tupaia_belangeri
ENSOGAG00000009059	LSM11	98	42.233	ENSXMAG00000008238	lsm11	50	42.233	Xiphophorus_maculatus