EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000009456 (Gene tree)
Gene ID: 100961515
Gene Symbol: RAB5C
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 3785 bases
Position: chrGL873537.1:22063434-22067218
Accession: 100961515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000008464	MMR_HSR1	PF01926.23	8.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000009456	RAB5C-201	651	-	ENSOGAP00000008464	216 (aa)	XP_012658540	H0X0L3

Gene Model

Click here to download ENSOGAG00000009456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000009456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000009456	RAB5C	71	34.375	ENSOGAG00000024221	REM1	55	33.533
ENSOGAG00000009456	RAB5C	93	37.681	ENSOGAG00000006778	RAB33B	89	37.681
ENSOGAG00000009456	RAB5C	89	34.848	ENSOGAG00000015082	RAB9B	97	34.848
ENSOGAG00000009456	RAB5C	77	42.442	ENSOGAG00000007885	RAB7A	83	42.442
ENSOGAG00000009456	RAB5C	94	41.379	ENSOGAG00000005245	RAB6B	98	41.379
ENSOGAG00000009456	RAB5C	75	40.361	ENSOGAG00000033299	RAB33A	70	40.361
ENSOGAG00000009456	RAB5C	85	35.870	ENSOGAG00000028002	RAB12	96	34.975
ENSOGAG00000009456	RAB5C	55	31.148	ENSOGAG00000030870	ARL8A	62	31.148
ENSOGAG00000009456	RAB5C	90	41.748	ENSOGAG00000007642	RAB11A	94	41.748
ENSOGAG00000009456	RAB5C	88	40.526	ENSOGAG00000002728	-	88	40.526
ENSOGAG00000009456	RAB5C	91	34.314	ENSOGAG00000006951	-	79	37.791
ENSOGAG00000009456	RAB5C	89	44.330	ENSOGAG00000028013	RAB1B	96	44.330
ENSOGAG00000009456	RAB5C	85	41.799	ENSOGAG00000028015	RAB18	94	40.299
ENSOGAG00000009456	RAB5C	89	34.343	ENSOGAG00000002868	RAB9A	97	34.343
ENSOGAG00000009456	RAB5C	81	34.807	ENSOGAG00000024846	HRAS	94	34.807
ENSOGAG00000009456	RAB5C	86	38.974	ENSOGAG00000028133	RAB21	99	38.158
ENSOGAG00000009456	RAB5C	91	40.816	ENSOGAG00000027043	RAB6A	93	40.816
ENSOGAG00000009456	RAB5C	89	43.077	ENSOGAG00000026181	RAB1A	95	43.077
ENSOGAG00000009456	RAB5C	81	35.028	ENSOGAG00000002443	RAB15	95	33.333
ENSOGAG00000009456	RAB5C	75	31.902	ENSOGAG00000028680	NRAS	85	31.902
ENSOGAG00000009456	RAB5C	83	39.459	ENSOGAG00000033189	RAB30	91	39.459
ENSOGAG00000009456	RAB5C	89	40.796	ENSOGAG00000016955	RAB25	93	40.796
ENSOGAG00000009456	RAB5C	75	36.585	ENSOGAG00000025424	RAB39B	77	36.585
ENSOGAG00000009456	RAB5C	71	35.948	ENSOGAG00000009123	-	65	35.948
ENSOGAG00000009456	RAB5C	76	38.415	ENSOGAG00000012973	RAB14	76	38.415
ENSOGAG00000009456	RAB5C	73	35.802	ENSOGAG00000000096	RAB36	60	35.802
ENSOGAG00000009456	RAB5C	77	32.934	ENSOGAG00000014812	KRAS	95	30.387
ENSOGAG00000009456	RAB5C	91	46.429	ENSOGAG00000014855	RAB31	99	46.429
ENSOGAG00000009456	RAB5C	90	37.629	ENSOGAG00000016969	-	95	37.629
ENSOGAG00000009456	RAB5C	90	42.512	ENSOGAG00000003227	RAB11B	94	42.512
ENSOGAG00000009456	RAB5C	80	36.416	ENSOGAG00000005675	RAB23	73	36.416
ENSOGAG00000009456	RAB5C	90	48.454	ENSOGAG00000015779	RAB22A	98	48.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000009456	RAB5C	100	99.074	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSOGAG00000009456	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.628	Acanthochromis_polyacanthus
ENSOGAG00000009456	RAB5C	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSOGAG00000009456	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSOGAG00000009456	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.667	Amphiprion_ocellaris
ENSOGAG00000009456	RAB5C	97	89.100	ENSAPEG00000017868	-	97	91.469	Amphiprion_percula
ENSOGAG00000009456	RAB5C	100	89.908	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSOGAG00000009456	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSOGAG00000009456	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.741	Astatotilapia_calliptera
ENSOGAG00000009456	RAB5C	95	89.952	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSOGAG00000009456	RAB5C	95	88.942	ENSAMXG00000037267	-	99	91.346	Astyanax_mexicanus
ENSOGAG00000009456	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSOGAG00000009456	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSOGAG00000009456	RAB5C	99	76.279	WBGene00004268	rab-5	99	76.279	Caenorhabditis_elegans
ENSOGAG00000009456	RAB5C	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSOGAG00000009456	RAB5C	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSOGAG00000009456	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSOGAG00000009456	RAB5C	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSOGAG00000009456	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSOGAG00000009456	RAB5C	100	99.074	ENSCATG00000040873	RAB5C	100	99.074	Cercocebus_atys
ENSOGAG00000009456	RAB5C	100	98.148	ENSCLAG00000016650	RAB5C	100	98.148	Chinchilla_lanigera
ENSOGAG00000009456	RAB5C	82	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSOGAG00000009456	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSOGAG00000009456	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSOGAG00000009456	RAB5C	100	98.148	ENSCGRG00001014226	Rab5c	100	98.148	Cricetulus_griseus_chok1gshd
ENSOGAG00000009456	RAB5C	100	98.148	ENSCGRG00000007534	Rab5c	100	98.148	Cricetulus_griseus_crigri
ENSOGAG00000009456	RAB5C	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSOGAG00000009456	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSOGAG00000009456	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSOGAG00000009456	RAB5C	100	99.537	ENSDORG00000006819	Rab5c	100	99.537	Dipodomys_ordii
ENSOGAG00000009456	RAB5C	99	74.178	FBgn0014010	Rab5	95	74.178	Drosophila_melanogaster
ENSOGAG00000009456	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSOGAG00000009456	RAB5C	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSOGAG00000009456	RAB5C	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSOGAG00000009456	RAB5C	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSOGAG00000009456	RAB5C	99	88.889	ENSELUG00000010439	-	98	88.889	Esox_lucius
ENSOGAG00000009456	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSOGAG00000009456	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSOGAG00000009456	RAB5C	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSOGAG00000009456	RAB5C	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSOGAG00000009456	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSOGAG00000009456	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.741	Gadus_morhua
ENSOGAG00000009456	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSOGAG00000009456	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.667	Gambusia_affinis
ENSOGAG00000009456	RAB5C	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSOGAG00000009456	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSOGAG00000009456	RAB5C	100	99.074	ENSGGOG00000005472	RAB5C	100	99.074	Gorilla_gorilla
ENSOGAG00000009456	RAB5C	95	89.952	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSOGAG00000009456	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.741	Haplochromis_burtoni
ENSOGAG00000009456	RAB5C	100	94.907	ENSHGLG00000012067	RAB5C	100	94.907	Heterocephalus_glaber_female
ENSOGAG00000009456	RAB5C	96	81.991	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSOGAG00000009456	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSOGAG00000009456	RAB5C	95	87.981	ENSIPUG00000020082	rab5c	98	88.991	Ictalurus_punctatus
ENSOGAG00000009456	RAB5C	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSOGAG00000009456	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSOGAG00000009456	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSOGAG00000009456	RAB5C	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSOGAG00000009456	RAB5C	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSOGAG00000009456	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSOGAG00000009456	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSOGAG00000009456	RAB5C	100	99.074	ENSMFAG00000039627	RAB5C	100	99.074	Macaca_fascicularis
ENSOGAG00000009456	RAB5C	100	99.074	ENSMNEG00000000355	RAB5C	100	99.074	Macaca_nemestrina
ENSOGAG00000009456	RAB5C	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSOGAG00000009456	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSOGAG00000009456	RAB5C	95	89.952	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSOGAG00000009456	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.741	Maylandia_zebra
ENSOGAG00000009456	RAB5C	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSOGAG00000009456	RAB5C	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSOGAG00000009456	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSOGAG00000009456	RAB5C	100	90.367	ENSMMOG00000020621	rab5c	99	90.367	Mola_mola
ENSOGAG00000009456	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSOGAG00000009456	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSOGAG00000009456	RAB5C	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSOGAG00000009456	RAB5C	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSOGAG00000009456	RAB5C	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSOGAG00000009456	RAB5C	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSOGAG00000009456	RAB5C	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSOGAG00000009456	RAB5C	100	99.074	ENSNGAG00000010286	Rab5c	100	99.074	Nannospalax_galili
ENSOGAG00000009456	RAB5C	95	89.952	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSOGAG00000009456	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.667	Neolamprologus_brichardi
ENSOGAG00000009456	RAB5C	82	92.135	ENSOPRG00000008255	RAB5C	100	92.135	Ochotona_princeps
ENSOGAG00000009456	RAB5C	100	97.222	ENSODEG00000017920	RAB5C	100	97.222	Octodon_degus
ENSOGAG00000009456	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.667	Oreochromis_niloticus
ENSOGAG00000009456	RAB5C	100	88.532	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSOGAG00000009456	RAB5C	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSOGAG00000009456	RAB5C	100	88.532	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSOGAG00000009456	RAB5C	100	88.532	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSOGAG00000009456	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSOGAG00000009456	RAB5C	100	99.074	ENSPPAG00000037206	RAB5C	100	99.074	Pan_paniscus
ENSOGAG00000009456	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSOGAG00000009456	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSOGAG00000009456	RAB5C	100	99.074	ENSPTRG00000009194	RAB5C	100	99.074	Pan_troglodytes
ENSOGAG00000009456	RAB5C	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSOGAG00000009456	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSOGAG00000009456	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSOGAG00000009456	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSOGAG00000009456	RAB5C	99	79.070	ENSPMAG00000001399	rab5c	100	79.070	Petromyzon_marinus
ENSOGAG00000009456	RAB5C	99	78.505	ENSPMAG00000007867	rab5c	99	78.505	Petromyzon_marinus
ENSOGAG00000009456	RAB5C	99	79.279	ENSPMAG00000000008	rab5c	100	79.279	Petromyzon_marinus
ENSOGAG00000009456	RAB5C	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSOGAG00000009456	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.667	Poecilia_latipinna
ENSOGAG00000009456	RAB5C	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSOGAG00000009456	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.667	Poecilia_mexicana
ENSOGAG00000009456	RAB5C	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSOGAG00000009456	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.667	Poecilia_reticulata
ENSOGAG00000009456	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSOGAG00000009456	RAB5C	100	99.074	ENSPPYG00000008398	RAB5C	100	99.074	Pongo_abelii
ENSOGAG00000009456	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSOGAG00000009456	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSOGAG00000009456	RAB5C	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSOGAG00000009456	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.741	Pundamilia_nyererei
ENSOGAG00000009456	RAB5C	95	89.952	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSOGAG00000009456	RAB5C	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSOGAG00000009456	RAB5C	96	87.143	ENSPNAG00000002218	-	99	89.100	Pygocentrus_nattereri
ENSOGAG00000009456	RAB5C	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSOGAG00000009456	RAB5C	100	99.074	ENSRBIG00000031376	RAB5C	100	99.074	Rhinopithecus_bieti
ENSOGAG00000009456	RAB5C	100	99.074	ENSRROG00000032895	RAB5C	100	99.074	Rhinopithecus_roxellana
ENSOGAG00000009456	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSOGAG00000009456	RAB5C	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSOGAG00000009456	RAB5C	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSOGAG00000009456	RAB5C	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSOGAG00000009456	RAB5C	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSOGAG00000009456	RAB5C	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSOGAG00000009456	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSOGAG00000009456	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.593	Stegastes_partitus
ENSOGAG00000009456	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSOGAG00000009456	RAB5C	99	88.426	ENSTRUG00000015590	rab5c	98	90.741	Takifugu_rubripes
ENSOGAG00000009456	RAB5C	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSOGAG00000009456	RAB5C	100	99.074	ENSTBEG00000007092	RAB5C	100	99.074	Tupaia_belangeri
ENSOGAG00000009456	RAB5C	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSOGAG00000009456	RAB5C	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSOGAG00000009456	RAB5C	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSOGAG00000009456	RAB5C	96	91.905	ENSXCOG00000006300	-	99	88.688	Xiphophorus_couchianus
ENSOGAG00000009456	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.667	Xiphophorus_couchianus
ENSOGAG00000009456	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.667	Xiphophorus_maculatus
ENSOGAG00000009456	RAB5C	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus