EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000009702 (Gene tree)
Gene ID: 100949780
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 35520 bases
Position: chrGL873560.1:4175862-4211381
Accession: 100949780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000008678	ResIII	PF04851.15	5.1e-11	1	1
ENSOGAP00000008678	DEAD	PF00270.29	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000009708	SMARCA5-201	3475	-	ENSOGAP00000008678	1052 (aa)	XP_003790238	H0X136

Gene Model

Click here to download ENSOGAG00000009702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000009702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000009702	SMARCA5	91	86.157	ENSOGAG00000004399	SMARCA1	91	86.283
ENSOGAG00000009702	SMARCA5	54	43.106	ENSOGAG00000008775	CHD1L	63	42.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000009702	SMARCA5	100	98.954	ENSG00000153147	SMARCA5	100	98.954	Homo_sapiens
ENSOGAG00000009702	SMARCA5	100	99.049	ENSAMEG00000009585	SMARCA5	100	99.049	Ailuropoda_melanoleuca
ENSOGAG00000009702	SMARCA5	91	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSOGAG00000009702	SMARCA5	98	93.913	ENSACAG00000003038	SMARCA5	99	93.913	Anolis_carolinensis
ENSOGAG00000009702	SMARCA5	100	98.859	ENSANAG00000019345	SMARCA5	100	98.859	Aotus_nancymaae
ENSOGAG00000009702	SMARCA5	100	98.479	ENSBTAG00000003399	SMARCA5	100	98.479	Bos_taurus
ENSOGAG00000009702	SMARCA5	100	99.049	ENSCJAG00000002735	SMARCA5	100	99.049	Callithrix_jacchus
ENSOGAG00000009702	SMARCA5	100	98.764	ENSCAFG00000007525	SMARCA5	100	98.764	Canis_familiaris
ENSOGAG00000009702	SMARCA5	98	98.740	ENSCAFG00020025641	SMARCA5	99	98.740	Canis_lupus_dingo
ENSOGAG00000009702	SMARCA5	100	98.954	ENSCHIG00000013730	-	100	98.954	Capra_hircus
ENSOGAG00000009702	SMARCA5	100	97.243	ENSCHIG00000016375	-	100	97.243	Capra_hircus
ENSOGAG00000009702	SMARCA5	99	95.710	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSOGAG00000009702	SMARCA5	92	99.070	ENSCAPG00000013747	SMARCA5	95	99.070	Cavia_aperea
ENSOGAG00000009702	SMARCA5	100	97.814	ENSCPOG00000002259	SMARCA5	100	97.814	Cavia_porcellus
ENSOGAG00000009702	SMARCA5	100	99.049	ENSCCAG00000027215	SMARCA5	100	99.049	Cebus_capucinus
ENSOGAG00000009702	SMARCA5	100	99.049	ENSCATG00000044917	SMARCA5	100	99.049	Cercocebus_atys
ENSOGAG00000009702	SMARCA5	97	96.875	ENSCLAG00000006153	SMARCA5	100	99.295	Chinchilla_lanigera
ENSOGAG00000009702	SMARCA5	92	99.690	ENSCSAG00000003448	SMARCA5	100	99.690	Chlorocebus_sabaeus
ENSOGAG00000009702	SMARCA5	91	98.405	ENSCHOG00000011724	SMARCA5	91	98.405	Choloepus_hoffmanni
ENSOGAG00000009702	SMARCA5	95	98.094	ENSCPBG00000027535	SMARCA5	96	97.900	Chrysemys_picta_bellii
ENSOGAG00000009702	SMARCA5	100	98.859	ENSCANG00000041629	SMARCA5	100	98.859	Colobus_angolensis_palliatus
ENSOGAG00000009702	SMARCA5	99	97.909	ENSCGRG00001012719	Smarca5	99	97.909	Cricetulus_griseus_chok1gshd
ENSOGAG00000009702	SMARCA5	96	98.317	ENSCGRG00000001417	Smarca5	99	99.396	Cricetulus_griseus_crigri
ENSOGAG00000009702	SMARCA5	98	95.648	ENSDNOG00000009158	SMARCA5	97	96.075	Dasypus_novemcinctus
ENSOGAG00000009702	SMARCA5	90	90.823	ENSDORG00000003466	Smarca5	97	90.823	Dipodomys_ordii
ENSOGAG00000009702	SMARCA5	92	85.847	ENSEBUG00000014773	SMARCA5	96	85.847	Eptatretus_burgeri
ENSOGAG00000009702	SMARCA5	100	99.240	ENSEASG00005001866	SMARCA5	100	99.240	Equus_asinus_asinus
ENSOGAG00000009702	SMARCA5	100	99.240	ENSECAG00000002676	SMARCA5	100	99.240	Equus_caballus
ENSOGAG00000009702	SMARCA5	94	95.065	ENSEEUG00000013176	SMARCA5	100	95.065	Erinaceus_europaeus
ENSOGAG00000009702	SMARCA5	92	89.381	ENSELUG00000014653	SMARCA5	99	89.381	Esox_lucius
ENSOGAG00000009702	SMARCA5	100	99.049	ENSFCAG00000004544	SMARCA5	100	99.049	Felis_catus
ENSOGAG00000009702	SMARCA5	92	97.423	ENSFALG00000004987	SMARCA5	100	97.423	Ficedula_albicollis
ENSOGAG00000009702	SMARCA5	99	95.602	ENSFDAG00000021016	SMARCA5	100	99.496	Fukomys_damarensis
ENSOGAG00000009702	SMARCA5	99	85.043	ENSGMOG00000007519	SMARCA5	97	87.649	Gadus_morhua
ENSOGAG00000009702	SMARCA5	95	97.590	ENSGALG00000009913	SMARCA5	98	96.275	Gallus_gallus
ENSOGAG00000009702	SMARCA5	93	90.583	ENSGACG00000017238	SMARCA5	95	90.583	Gasterosteus_aculeatus
ENSOGAG00000009702	SMARCA5	96	97.241	ENSGAGG00000019882	SMARCA5	96	98.000	Gopherus_agassizii
ENSOGAG00000009702	SMARCA5	100	98.954	ENSGGOG00000012595	SMARCA5	100	98.954	Gorilla_gorilla
ENSOGAG00000009702	SMARCA5	100	97.814	ENSHGLG00000000816	-	99	97.814	Heterocephalus_glaber_female
ENSOGAG00000009702	SMARCA5	96	89.552	ENSHGLG00000000317	-	95	89.610	Heterocephalus_glaber_female
ENSOGAG00000009702	SMARCA5	96	97.923	ENSHGLG00100018421	-	100	99.396	Heterocephalus_glaber_male
ENSOGAG00000009702	SMARCA5	100	98.670	ENSSTOG00000010683	SMARCA5	99	98.670	Ictidomys_tridecemlineatus
ENSOGAG00000009702	SMARCA5	100	97.624	ENSJJAG00000014965	Smarca5	100	97.624	Jaculus_jaculus
ENSOGAG00000009702	SMARCA5	94	95.560	ENSLACG00000007091	SMARCA5	97	95.560	Latimeria_chalumnae
ENSOGAG00000009702	SMARCA5	94	92.487	ENSLOCG00000008966	SMARCA5	98	90.963	Lepisosteus_oculatus
ENSOGAG00000009702	SMARCA5	100	98.764	ENSLAFG00000007795	SMARCA5	100	98.764	Loxodonta_africana
ENSOGAG00000009702	SMARCA5	100	99.049	ENSMFAG00000043649	SMARCA5	100	99.049	Macaca_fascicularis
ENSOGAG00000009702	SMARCA5	100	99.049	ENSMMUG00000000829	SMARCA5	100	99.049	Macaca_mulatta
ENSOGAG00000009702	SMARCA5	100	99.049	ENSMNEG00000031916	SMARCA5	100	99.049	Macaca_nemestrina
ENSOGAG00000009702	SMARCA5	100	99.049	ENSMLEG00000042393	SMARCA5	100	99.049	Mandrillus_leucophaeus
ENSOGAG00000009702	SMARCA5	95	97.200	ENSMGAG00000003517	SMARCA5	99	97.200	Meleagris_gallopavo
ENSOGAG00000009702	SMARCA5	94	99.496	ENSMAUG00000015902	Smarca5	98	99.496	Mesocricetus_auratus
ENSOGAG00000009702	SMARCA5	100	99.525	ENSMICG00000003971	SMARCA5	100	99.525	Microcebus_murinus
ENSOGAG00000009702	SMARCA5	99	97.624	ENSMOCG00000016986	-	99	97.624	Microtus_ochrogaster
ENSOGAG00000009702	SMARCA5	100	95.924	ENSMODG00000000391	SMARCA5	95	98.899	Monodelphis_domestica
ENSOGAG00000009702	SMARCA5	100	97.909	ENSMUSG00000031715	Smarca5	100	97.909	Mus_musculus
ENSOGAG00000009702	SMARCA5	100	98.099	MGP_PahariEiJ_G0022862	Smarca5	100	98.099	Mus_pahari
ENSOGAG00000009702	SMARCA5	100	98.859	ENSMLUG00000000468	SMARCA5	100	98.859	Myotis_lucifugus
ENSOGAG00000009702	SMARCA5	100	97.909	ENSNGAG00000000441	Smarca5	100	97.909	Nannospalax_galili
ENSOGAG00000009702	SMARCA5	100	99.049	ENSNLEG00000005383	SMARCA5	100	99.049	Nomascus_leucogenys
ENSOGAG00000009702	SMARCA5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSOGAG00000009702	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSOGAG00000009702	SMARCA5	92	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSOGAG00000009702	SMARCA5	92	99.690	ENSOCUG00000013042	SMARCA5	100	99.690	Oryctolagus_cuniculus
ENSOGAG00000009702	SMARCA5	99	98.668	ENSOARG00000010589	SMARCA5	99	98.668	Ovis_aries
ENSOGAG00000009702	SMARCA5	100	98.764	ENSPPAG00000028523	SMARCA5	100	98.764	Pan_paniscus
ENSOGAG00000009702	SMARCA5	97	93.652	ENSPPRG00000004925	SMARCA5	97	94.504	Panthera_pardus
ENSOGAG00000009702	SMARCA5	96	99.505	ENSPTIG00000020959	SMARCA5	97	99.505	Panthera_tigris_altaica
ENSOGAG00000009702	SMARCA5	100	98.859	ENSPTRG00000016472	SMARCA5	100	98.859	Pan_troglodytes
ENSOGAG00000009702	SMARCA5	100	99.049	ENSPANG00000001175	SMARCA5	100	99.049	Papio_anubis
ENSOGAG00000009702	SMARCA5	95	89.500	ENSPKIG00000015885	SMARCA5	100	91.443	Paramormyrops_kingsleyae
ENSOGAG00000009702	SMARCA5	93	90.779	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSOGAG00000009702	SMARCA5	95	96.088	ENSPSIG00000004177	SMARCA5	100	96.088	Pelodiscus_sinensis
ENSOGAG00000009702	SMARCA5	92	90.123	ENSPMGG00000012316	SMARCA5	100	90.123	Periophthalmus_magnuspinnatus
ENSOGAG00000009702	SMARCA5	96	97.734	ENSPEMG00000008060	Smarca5	99	97.734	Peromyscus_maniculatus_bairdii
ENSOGAG00000009702	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSOGAG00000009702	SMARCA5	96	69.793	ENSPMAG00000006011	SMARCA5	82	84.301	Petromyzon_marinus
ENSOGAG00000009702	SMARCA5	100	95.459	ENSPCIG00000003926	SMARCA5	95	98.899	Phascolarctos_cinereus
ENSOGAG00000009702	SMARCA5	100	98.954	ENSPPYG00000015091	SMARCA5	100	98.954	Pongo_abelii
ENSOGAG00000009702	SMARCA5	86	90.541	ENSPCAG00000014230	SMARCA5	88	90.783	Procavia_capensis
ENSOGAG00000009702	SMARCA5	100	96.768	ENSPCOG00000026744	SMARCA5	100	96.768	Propithecus_coquereli
ENSOGAG00000009702	SMARCA5	99	98.668	ENSPVAG00000006482	SMARCA5	100	98.668	Pteropus_vampyrus
ENSOGAG00000009702	SMARCA5	96	88.473	ENSPNAG00000027824	SMARCA5	97	90.353	Pygocentrus_nattereri
ENSOGAG00000009702	SMARCA5	95	99.296	ENSRNOG00000018149	Smarca5	100	99.296	Rattus_norvegicus
ENSOGAG00000009702	SMARCA5	100	98.860	ENSRBIG00000044644	SMARCA5	100	98.860	Rhinopithecus_bieti
ENSOGAG00000009702	SMARCA5	98	98.742	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSOGAG00000009702	SMARCA5	100	98.764	ENSSBOG00000036257	SMARCA5	100	98.764	Saimiri_boliviensis_boliviensis
ENSOGAG00000009702	SMARCA5	94	98.993	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSOGAG00000009702	SMARCA5	94	90.352	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSOGAG00000009702	SMARCA5	97	95.088	ENSSPUG00000007604	SMARCA5	99	96.382	Sphenodon_punctatus
ENSOGAG00000009702	SMARCA5	100	98.384	ENSSSCG00000009047	SMARCA5	100	98.384	Sus_scrofa
ENSOGAG00000009702	SMARCA5	96	96.131	ENSTGUG00000002408	SMARCA5	100	96.131	Taeniopygia_guttata
ENSOGAG00000009702	SMARCA5	98	99.031	ENSUAMG00000023495	SMARCA5	99	99.031	Ursus_americanus
ENSOGAG00000009702	SMARCA5	95	99.601	ENSUMAG00000015324	SMARCA5	97	99.601	Ursus_maritimus
ENSOGAG00000009702	SMARCA5	100	98.479	ENSVPAG00000008982	SMARCA5	100	98.479	Vicugna_pacos
ENSOGAG00000009702	SMARCA5	100	98.954	ENSVVUG00000017473	SMARCA5	100	98.954	Vulpes_vulpes
ENSOGAG00000009702	SMARCA5	90	93.136	ENSXETG00000017566	smarca5	95	93.136	Xenopus_tropicalis