EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000010877 (Gene tree)
Gene ID: 100942857
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 13718 bases
Position: chrGL873661.1:1698379-1712096
Accession: 100942857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000009738	PPR	PF01535.20	6.3e-16	1	2
ENSOGAP00000009738	PPR	PF01535.20	6.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000010884	-	2094	XM_012810801	ENSOGAP00000009738	698 (aa)	XP_012666255	H0X3M4

Gene Model

Click here to download ENSOGAG00000010877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000010877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000010877	-	100	75.143	ENSG00000248919	ATP5MF-PTCD1	92	75.286	Homo_sapiens
ENSOGAG00000010877	-	100	75.143	ENSG00000106246	PTCD1	99	75.286	Homo_sapiens
ENSOGAG00000010877	-	81	44.834	ENSAPOG00000010679	ptcd1	85	45.115	Acanthochromis_polyacanthus
ENSOGAG00000010877	-	100	75.857	ENSAMEG00000006224	-	92	75.000	Ailuropoda_melanoleuca
ENSOGAG00000010877	-	87	47.650	ENSACIG00000017861	ptcd1	83	48.080	Amphilophus_citrinellus
ENSOGAG00000010877	-	84	46.801	ENSAOCG00000020741	-	82	46.434	Amphiprion_ocellaris
ENSOGAG00000010877	-	80	45.855	ENSAOCG00000022617	ptcd1	81	46.181	Amphiprion_ocellaris
ENSOGAG00000010877	-	97	43.275	ENSAPEG00000022632	ptcd1	82	46.333	Amphiprion_percula
ENSOGAG00000010877	-	90	46.825	ENSATEG00000007016	ptcd1	82	47.659	Anabas_testudineus
ENSOGAG00000010877	-	87	58.469	ENSAPLG00000006862	-	93	59.197	Anas_platyrhynchos
ENSOGAG00000010877	-	99	54.993	ENSACAG00000012871	-	92	54.852	Anolis_carolinensis
ENSOGAG00000010877	-	99	76.122	ENSANAG00000035790	-	100	76.266	Aotus_nancymaae
ENSOGAG00000010877	-	89	45.912	ENSACLG00000002824	ptcd1	87	45.597	Astatotilapia_calliptera
ENSOGAG00000010877	-	88	46.262	ENSAMXG00000037292	ptcd1	89	45.975	Astyanax_mexicanus
ENSOGAG00000010877	-	100	77.110	ENSBTAG00000020440	-	86	77.110	Bos_taurus
ENSOGAG00000010877	-	100	76.538	ENSCJAG00000015815	-	99	76.681	Callithrix_jacchus
ENSOGAG00000010877	-	100	75.714	ENSCAFG00000015055	-	92	74.857	Canis_familiaris
ENSOGAG00000010877	-	100	75.714	ENSCAFG00020014480	-	92	74.857	Canis_lupus_dingo
ENSOGAG00000010877	-	100	77.253	ENSCHIG00000027000	-	98	77.253	Capra_hircus
ENSOGAG00000010877	-	99	79.345	ENSTSYG00000029495	-	99	79.487	Carlito_syrichta
ENSOGAG00000010877	-	93	75.309	ENSCAPG00000014660	-	98	75.309	Cavia_aperea
ENSOGAG00000010877	-	99	74.175	ENSCPOG00000001780	-	98	74.175	Cavia_porcellus
ENSOGAG00000010877	-	99	75.107	ENSCCAG00000034025	-	99	75.823	Cebus_capucinus
ENSOGAG00000010877	-	100	74.571	ENSCATG00000040859	-	99	75.000	Cercocebus_atys
ENSOGAG00000010877	-	99	74.892	ENSCLAG00000006354	-	98	74.892	Chinchilla_lanigera
ENSOGAG00000010877	-	93	73.806	ENSCSAG00000017794	-	95	74.268	Chlorocebus_sabaeus
ENSOGAG00000010877	-	92	57.675	ENSCPBG00000020866	-	83	59.935	Chrysemys_picta_bellii
ENSOGAG00000010877	-	84	30.795	ENSCING00000007717	-	91	31.423	Ciona_intestinalis
ENSOGAG00000010877	-	100	74.392	ENSCANG00000023441	-	99	74.821	Colobus_angolensis_palliatus
ENSOGAG00000010877	-	99	72.206	ENSCGRG00001023686	Ptcd1	99	72.206	Cricetulus_griseus_chok1gshd
ENSOGAG00000010877	-	99	72.000	ENSCGRG00000015031	Ptcd1	99	72.000	Cricetulus_griseus_crigri
ENSOGAG00000010877	-	91	43.721	ENSCSEG00000002378	ptcd1	88	44.204	Cynoglossus_semilaevis
ENSOGAG00000010877	-	86	46.546	ENSCVAG00000015826	ptcd1	83	45.964	Cyprinodon_variegatus
ENSOGAG00000010877	-	86	46.942	ENSCVAG00000003621	ptcd1	88	45.649	Cyprinodon_variegatus
ENSOGAG00000010877	-	87	47.634	ENSDARG00000076176	ptcd1	87	47.764	Danio_rerio
ENSOGAG00000010877	-	100	73.542	ENSDNOG00000009957	-	99	74.822	Dasypus_novemcinctus
ENSOGAG00000010877	-	99	73.121	ENSDORG00000000740	Ptcd1	99	73.121	Dipodomys_ordii
ENSOGAG00000010877	-	90	41.282	ENSEBUG00000014515	ptcd1	98	42.341	Eptatretus_burgeri
ENSOGAG00000010877	-	100	78.977	ENSEASG00005002480	-	99	78.977	Equus_asinus_asinus
ENSOGAG00000010877	-	100	79.403	ENSECAG00000016617	-	99	79.403	Equus_caballus
ENSOGAG00000010877	-	87	45.141	ENSELUG00000016517	ptcd1	84	45.141	Esox_lucius
ENSOGAG00000010877	-	100	76.136	ENSFCAG00000015069	-	99	76.136	Felis_catus
ENSOGAG00000010877	-	87	58.665	ENSFALG00000013803	-	86	59.019	Ficedula_albicollis
ENSOGAG00000010877	-	99	73.391	ENSFDAG00000006393	-	99	73.104	Fukomys_damarensis
ENSOGAG00000010877	-	76	45.438	ENSFHEG00000012491	ptcd1	89	45.438	Fundulus_heteroclitus
ENSOGAG00000010877	-	83	46.735	ENSGMOG00000007639	ptcd1	91	46.735	Gadus_morhua
ENSOGAG00000010877	-	87	57.795	ENSGALG00000004711	-	87	57.795	Gallus_gallus
ENSOGAG00000010877	-	85	46.823	ENSGAFG00000013175	ptcd1	82	46.387	Gambusia_affinis
ENSOGAG00000010877	-	86	47.368	ENSGACG00000016607	ptcd1	91	46.906	Gasterosteus_aculeatus
ENSOGAG00000010877	-	88	56.290	ENSGAGG00000021832	-	91	55.682	Gopherus_agassizii
ENSOGAG00000010877	-	100	75.000	ENSGGOG00000015123	-	99	75.143	Gorilla_gorilla
ENSOGAG00000010877	-	89	45.912	ENSHBUG00000018275	ptcd1	87	45.597	Haplochromis_burtoni
ENSOGAG00000010877	-	99	74.425	ENSHGLG00000017621	-	98	74.425	Heterocephalus_glaber_female
ENSOGAG00000010877	-	99	74.425	ENSHGLG00100007218	-	98	74.425	Heterocephalus_glaber_male
ENSOGAG00000010877	-	84	45.763	ENSHCOG00000010784	ptcd1	82	45.826	Hippocampus_comes
ENSOGAG00000010877	-	99	75.431	ENSSTOG00000001682	-	98	75.431	Ictidomys_tridecemlineatus
ENSOGAG00000010877	-	99	72.389	ENSJJAG00000000319	Ptcd1	99	72.103	Jaculus_jaculus
ENSOGAG00000010877	-	85	46.064	ENSKMAG00000008708	ptcd1	80	46.429	Kryptolebias_marmoratus
ENSOGAG00000010877	-	88	46.353	ENSLBEG00000008061	ptcd1	84	45.631	Labrus_bergylta
ENSOGAG00000010877	-	92	54.627	ENSLACG00000011172	ptcd1	84	58.049	Latimeria_chalumnae
ENSOGAG00000010877	-	93	50.735	ENSLOCG00000004833	ptcd1	99	50.621	Lepisosteus_oculatus
ENSOGAG00000010877	-	100	69.803	ENSLAFG00000002588	-	99	71.307	Loxodonta_africana
ENSOGAG00000010877	-	100	74.571	ENSMFAG00000041324	-	99	75.000	Macaca_fascicularis
ENSOGAG00000010877	-	100	74.714	ENSMMUG00000030408	-	99	75.143	Macaca_mulatta
ENSOGAG00000010877	-	100	74.429	ENSMNEG00000043786	-	99	74.857	Macaca_nemestrina
ENSOGAG00000010877	-	100	56.000	ENSMLEG00000031179	-	99	58.143	Mandrillus_leucophaeus
ENSOGAG00000010877	-	86	47.500	ENSMAMG00000007623	ptcd1	80	47.789	Mastacembelus_armatus
ENSOGAG00000010877	-	89	45.912	ENSMZEG00005012722	ptcd1	87	45.597	Maylandia_zebra
ENSOGAG00000010877	-	91	57.935	ENSMGAG00000004211	-	87	56.801	Meleagris_gallopavo
ENSOGAG00000010877	-	100	83.381	ENSMICG00000017428	-	99	83.381	Microcebus_murinus
ENSOGAG00000010877	-	87	45.663	ENSMMOG00000020243	ptcd1	89	45.757	Mola_mola
ENSOGAG00000010877	-	93	62.033	ENSMODG00000001350	-	84	64.434	Monodelphis_domestica
ENSOGAG00000010877	-	86	47.697	ENSMALG00000018442	ptcd1	80	48.067	Monopterus_albus
ENSOGAG00000010877	-	99	71.960	MGP_CAROLIEiJ_G0028011	Ptcd1	99	72.103	Mus_caroli
ENSOGAG00000010877	-	99	71.960	ENSMUSG00000029624	Ptcd1	99	72.103	Mus_musculus
ENSOGAG00000010877	-	99	72.103	MGP_PahariEiJ_G0024580	Ptcd1	99	71.960	Mus_pahari
ENSOGAG00000010877	-	99	71.674	MGP_SPRETEiJ_G0029012	Ptcd1	99	71.817	Mus_spretus
ENSOGAG00000010877	-	100	73.714	ENSMPUG00000016518	-	99	73.857	Mustela_putorius_furo
ENSOGAG00000010877	-	100	78.267	ENSMLUG00000010994	-	93	78.551	Myotis_lucifugus
ENSOGAG00000010877	-	92	45.053	ENSNBRG00000010079	ptcd1	91	44.753	Neolamprologus_brichardi
ENSOGAG00000010877	-	100	79.006	ENSNLEG00000011060	-	98	79.006	Nomascus_leucogenys
ENSOGAG00000010877	-	96	62.170	ENSMEUG00000006930	-	96	62.170	Notamacropus_eugenii
ENSOGAG00000010877	-	90	74.232	ENSOPRG00000013647	-	88	74.232	Ochotona_princeps
ENSOGAG00000010877	-	86	45.977	ENSONIG00000003168	ptcd1	97	45.888	Oreochromis_niloticus
ENSOGAG00000010877	-	83	56.131	ENSOANG00000007728	-	76	55.786	Ornithorhynchus_anatinus
ENSOGAG00000010877	-	100	73.391	ENSOCUG00000010584	-	97	73.247	Oryctolagus_cuniculus
ENSOGAG00000010877	-	86	47.697	ENSORLG00000009275	ptcd1	85	47.282	Oryzias_latipes
ENSOGAG00000010877	-	86	46.645	ENSORLG00020000988	ptcd1	85	46.217	Oryzias_latipes_hni
ENSOGAG00000010877	-	86	46.721	ENSORLG00015010557	ptcd1	85	46.305	Oryzias_latipes_hsok
ENSOGAG00000010877	-	91	45.216	ENSOMEG00000020627	ptcd1	92	44.961	Oryzias_melastigma
ENSOGAG00000010877	-	100	72.301	ENSOARG00000018676	-	99	72.301	Ovis_aries
ENSOGAG00000010877	-	100	74.429	ENSPPAG00000036024	-	99	74.571	Pan_paniscus
ENSOGAG00000010877	-	100	76.681	ENSPPRG00000003478	-	99	76.681	Panthera_pardus
ENSOGAG00000010877	-	100	74.571	ENSPTRG00000019452	-	99	74.714	Pan_troglodytes
ENSOGAG00000010877	-	100	74.571	ENSPANG00000016730	-	99	75.000	Papio_anubis
ENSOGAG00000010877	-	88	50.553	ENSPKIG00000014215	ptcd1	88	51.220	Paramormyrops_kingsleyae
ENSOGAG00000010877	-	86	58.512	ENSPSIG00000011184	-	100	58.609	Pelodiscus_sinensis
ENSOGAG00000010877	-	74	40.918	ENSPMAG00000009667	ptcd1	100	40.727	Petromyzon_marinus
ENSOGAG00000010877	-	88	65.135	ENSPCIG00000024778	-	90	62.930	Phascolarctos_cinereus
ENSOGAG00000010877	-	85	46.578	ENSPFOG00000004458	ptcd1	82	46.644	Poecilia_formosa
ENSOGAG00000010877	-	85	46.745	ENSPLAG00000011051	ptcd1	82	46.812	Poecilia_latipinna
ENSOGAG00000010877	-	89	45.325	ENSPMEG00000020547	ptcd1	82	46.477	Poecilia_mexicana
ENSOGAG00000010877	-	84	47.019	ENSPREG00000000059	ptcd1	82	47.029	Poecilia_reticulata
ENSOGAG00000010877	-	93	77.266	ENSPPYG00000017377	-	98	77.266	Pongo_abelii
ENSOGAG00000010877	-	80	80.147	ENSPCAG00000001852	-	86	80.147	Procavia_capensis
ENSOGAG00000010877	-	100	83.238	ENSPCOG00000018596	-	99	83.238	Propithecus_coquereli
ENSOGAG00000010877	-	68	80.000	ENSPVAG00000007529	-	73	80.000	Pteropus_vampyrus
ENSOGAG00000010877	-	89	45.912	ENSPNYG00000019993	ptcd1	87	45.597	Pundamilia_nyererei
ENSOGAG00000010877	-	89	50.317	ENSPNAG00000014931	ptcd1	92	49.847	Pygocentrus_nattereri
ENSOGAG00000010877	-	99	71.821	ENSRNOG00000000987	Ptcd1	98	71.676	Rattus_norvegicus
ENSOGAG00000010877	-	100	74.392	ENSRBIG00000043393	-	99	74.821	Rhinopithecus_bieti
ENSOGAG00000010877	-	100	74.392	ENSRROG00000036420	-	99	74.821	Rhinopithecus_roxellana
ENSOGAG00000010877	-	100	76.395	ENSSBOG00000024114	-	99	76.538	Saimiri_boliviensis_boliviensis
ENSOGAG00000010877	-	92	60.823	ENSSHAG00000011376	-	98	61.479	Sarcophilus_harrisii
ENSOGAG00000010877	-	88	52.215	ENSSFOG00015007909	ptcd1	83	51.987	Scleropages_formosus
ENSOGAG00000010877	-	87	44.951	ENSSMAG00000000218	ptcd1	93	45.336	Scophthalmus_maximus
ENSOGAG00000010877	-	89	45.687	ENSSDUG00000015671	ptcd1	88	45.687	Seriola_dumerili
ENSOGAG00000010877	-	89	45.008	ENSSLDG00000014261	ptcd1	87	45.008	Seriola_lalandi_dorsalis
ENSOGAG00000010877	-	94	55.425	ENSSPUG00000003540	-	84	57.862	Sphenodon_punctatus
ENSOGAG00000010877	-	89	46.919	ENSSPAG00000011049	ptcd1	82	47.533	Stegastes_partitus
ENSOGAG00000010877	-	92	78.072	ENSSSCG00000007622	-	98	77.405	Sus_scrofa
ENSOGAG00000010877	-	88	58.158	ENSTGUG00000007563	-	99	58.920	Taeniopygia_guttata
ENSOGAG00000010877	-	84	47.395	ENSTRUG00000013471	ptcd1	79	46.949	Takifugu_rubripes
ENSOGAG00000010877	-	84	47.475	ENSTNIG00000008271	ptcd1	83	47.627	Tetraodon_nigroviridis
ENSOGAG00000010877	-	100	76.353	ENSTBEG00000011021	-	99	76.353	Tupaia_belangeri
ENSOGAG00000010877	-	100	75.393	ENSTTRG00000003006	-	99	75.393	Tursiops_truncatus
ENSOGAG00000010877	-	100	75.714	ENSUAMG00000008049	-	99	74.857	Ursus_americanus
ENSOGAG00000010877	-	99	75.323	ENSVVUG00000008836	-	99	75.323	Vulpes_vulpes
ENSOGAG00000010877	-	85	52.152	ENSXETG00000009891	ptcd1	87	51.382	Xenopus_tropicalis
ENSOGAG00000010877	-	85	47.643	ENSXMAG00000015540	ptcd1	82	47.547	Xiphophorus_maculatus