EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000011063 (Gene tree)
Gene ID: 100950672
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 134502 bases
Position: chrGL873703.1:890859-1025360
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000009910	PUF	PF00806.19	4.4e-52	1	6
ENSOGAP00000009910	PUF	PF00806.19	4.4e-52	2	6
ENSOGAP00000009910	PUF	PF00806.19	4.4e-52	3	6
ENSOGAP00000009910	PUF	PF00806.19	4.4e-52	4	6
ENSOGAP00000009910	PUF	PF00806.19	4.4e-52	5	6
ENSOGAP00000009910	PUF	PF00806.19	4.4e-52	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000011074	PUM1-201	3564	-	ENSOGAP00000009910	1187 (aa)	-	H0X416

Gene Model

Click here to download ENSOGAG00000011063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000011063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000011063	PUM1	84	79.587	ENSOGAG00000002187	PUM2	100	68.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000011063	PUM1	100	96.977	ENSG00000134644	PUM1	100	99.306	Homo_sapiens
ENSOGAG00000011063	PUM1	100	71.950	ENSAPOG00000021632	pum1	100	83.453	Acanthochromis_polyacanthus
ENSOGAG00000011063	PUM1	100	96.393	ENSAMEG00000017656	PUM1	97	96.393	Ailuropoda_melanoleuca
ENSOGAG00000011063	PUM1	100	71.606	ENSACIG00000021013	pum1	100	73.719	Amphilophus_citrinellus
ENSOGAG00000011063	PUM1	100	71.950	ENSAOCG00000003944	pum1	100	74.151	Amphiprion_ocellaris
ENSOGAG00000011063	PUM1	100	71.950	ENSAPEG00000014550	pum1	100	74.151	Amphiprion_percula
ENSOGAG00000011063	PUM1	100	72.033	ENSATEG00000016004	pum1	100	83.453	Anabas_testudineus
ENSOGAG00000011063	PUM1	100	94.710	ENSAPLG00000009351	PUM1	100	94.710	Anas_platyrhynchos
ENSOGAG00000011063	PUM1	100	92.695	ENSACAG00000000682	PUM1	98	92.695	Anolis_carolinensis
ENSOGAG00000011063	PUM1	100	96.558	ENSANAG00000027865	PUM1	100	99.306	Aotus_nancymaae
ENSOGAG00000011063	PUM1	90	73.660	ENSACLG00000019354	pum1	100	75.923	Astatotilapia_calliptera
ENSOGAG00000011063	PUM1	100	76.294	ENSAMXG00000020607	pum1	96	76.544	Astyanax_mexicanus
ENSOGAG00000011063	PUM1	100	96.306	ENSBTAG00000018979	PUM1	100	99.306	Bos_taurus
ENSOGAG00000011063	PUM1	100	96.725	ENSCJAG00000006035	PUM1	100	99.306	Callithrix_jacchus
ENSOGAG00000011063	PUM1	100	94.291	ENSCAFG00000011205	PUM1	100	94.291	Canis_familiaris
ENSOGAG00000011063	PUM1	91	95.032	ENSCAFG00020024616	PUM1	99	95.455	Canis_lupus_dingo
ENSOGAG00000011063	PUM1	100	96.306	ENSCHIG00000012952	PUM1	100	96.306	Capra_hircus
ENSOGAG00000011063	PUM1	100	96.641	ENSTSYG00000008868	PUM1	100	98.611	Carlito_syrichta
ENSOGAG00000011063	PUM1	100	96.306	ENSCPOG00000031613	PUM1	100	98.611	Cavia_porcellus
ENSOGAG00000011063	PUM1	100	94.710	ENSCATG00000017991	PUM1	100	99.306	Cercocebus_atys
ENSOGAG00000011063	PUM1	100	96.390	ENSCLAG00000007662	PUM1	100	98.611	Chinchilla_lanigera
ENSOGAG00000011063	PUM1	100	96.090	ENSCSAG00000001028	PUM1	100	96.090	Chlorocebus_sabaeus
ENSOGAG00000011063	PUM1	93	96.121	ENSCHOG00000010245	PUM1	93	96.121	Choloepus_hoffmanni
ENSOGAG00000011063	PUM1	100	94.626	ENSCPBG00000009288	PUM1	100	95.833	Chrysemys_picta_bellii
ENSOGAG00000011063	PUM1	100	96.893	ENSCANG00000042606	PUM1	100	99.306	Colobus_angolensis_palliatus
ENSOGAG00000011063	PUM1	100	95.298	ENSCGRG00001024949	Pum1	100	98.611	Cricetulus_griseus_chok1gshd
ENSOGAG00000011063	PUM1	100	95.298	ENSCGRG00000014197	Pum1	100	98.611	Cricetulus_griseus_crigri
ENSOGAG00000011063	PUM1	90	73.105	ENSCSEG00000015981	pum1	100	74.792	Cynoglossus_semilaevis
ENSOGAG00000011063	PUM1	100	71.286	ENSCVAG00000007043	pum1	100	73.157	Cyprinodon_variegatus
ENSOGAG00000011063	PUM1	100	76.628	ENSDARG00000099256	pum1	100	76.962	Danio_rerio
ENSOGAG00000011063	PUM1	100	96.222	ENSDNOG00000010939	PUM1	100	96.222	Dasypus_novemcinctus
ENSOGAG00000011063	PUM1	85	93.823	ENSDORG00000001875	Pum1	100	93.874	Dipodomys_ordii
ENSOGAG00000011063	PUM1	86	90.458	ENSETEG00000004355	PUM1	87	90.458	Echinops_telfairi
ENSOGAG00000011063	PUM1	100	96.138	ENSEASG00005010813	PUM1	100	96.138	Equus_asinus_asinus
ENSOGAG00000011063	PUM1	100	96.138	ENSECAG00000021369	PUM1	100	96.138	Equus_caballus
ENSOGAG00000011063	PUM1	76	99.661	ENSEEUG00000003871	PUM1	74	99.661	Erinaceus_europaeus
ENSOGAG00000011063	PUM1	100	73.459	ENSELUG00000002409	pum1	100	79.408	Esox_lucius
ENSOGAG00000011063	PUM1	100	96.641	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSOGAG00000011063	PUM1	100	93.144	ENSFALG00000001214	PUM1	97	92.140	Ficedula_albicollis
ENSOGAG00000011063	PUM1	100	96.306	ENSFDAG00000011319	PUM1	100	98.611	Fukomys_damarensis
ENSOGAG00000011063	PUM1	100	94.878	ENSGALG00000042598	PUM1	99	96.780	Gallus_gallus
ENSOGAG00000011063	PUM1	100	71.120	ENSGAFG00000015617	pum1	100	82.734	Gambusia_affinis
ENSOGAG00000011063	PUM1	100	72.076	ENSGACG00000005717	pum1	100	73.766	Gasterosteus_aculeatus
ENSOGAG00000011063	PUM1	100	94.458	ENSGAGG00000001290	PUM1	99	96.441	Gopherus_agassizii
ENSOGAG00000011063	PUM1	100	96.893	ENSGGOG00000011983	PUM1	100	99.306	Gorilla_gorilla
ENSOGAG00000011063	PUM1	100	71.784	ENSHBUG00000018718	pum1	100	73.737	Haplochromis_burtoni
ENSOGAG00000011063	PUM1	100	96.138	ENSHGLG00000013819	Pum1	100	97.917	Heterocephalus_glaber_female
ENSOGAG00000011063	PUM1	100	96.138	ENSHGLG00100008621	Pum1	100	97.917	Heterocephalus_glaber_male
ENSOGAG00000011063	PUM1	100	75.000	ENSIPUG00000020421	pum1	100	75.436	Ictalurus_punctatus
ENSOGAG00000011063	PUM1	100	96.474	ENSSTOG00000010757	PUM1	100	99.306	Ictidomys_tridecemlineatus
ENSOGAG00000011063	PUM1	100	96.054	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSOGAG00000011063	PUM1	100	71.452	ENSKMAG00000003481	pum1	100	73.322	Kryptolebias_marmoratus
ENSOGAG00000011063	PUM1	100	71.155	ENSLBEG00000002527	pum1	100	73.278	Labrus_bergylta
ENSOGAG00000011063	PUM1	100	83.624	ENSLACG00000017188	PUM1	99	83.791	Latimeria_chalumnae
ENSOGAG00000011063	PUM1	100	85.583	ENSLOCG00000005210	pum1	99	85.667	Lepisosteus_oculatus
ENSOGAG00000011063	PUM1	100	96.134	ENSLAFG00000003178	PUM1	100	96.134	Loxodonta_africana
ENSOGAG00000011063	PUM1	100	96.653	ENSMFAG00000010291	PUM1	100	99.306	Macaca_fascicularis
ENSOGAG00000011063	PUM1	100	96.653	ENSMMUG00000013520	PUM1	100	99.306	Macaca_mulatta
ENSOGAG00000011063	PUM1	100	96.893	ENSMNEG00000034639	PUM1	100	99.306	Macaca_nemestrina
ENSOGAG00000011063	PUM1	100	96.893	ENSMLEG00000038743	PUM1	100	99.306	Mandrillus_leucophaeus
ENSOGAG00000011063	PUM1	100	71.950	ENSMAMG00000011606	pum1	100	73.902	Mastacembelus_armatus
ENSOGAG00000011063	PUM1	100	71.784	ENSMZEG00005005834	pum1	100	73.737	Maylandia_zebra
ENSOGAG00000011063	PUM1	100	94.458	ENSMGAG00000000724	PUM1	100	93.871	Meleagris_gallopavo
ENSOGAG00000011063	PUM1	100	95.466	ENSMAUG00000022090	Pum1	100	98.611	Mesocricetus_auratus
ENSOGAG00000011063	PUM1	100	96.809	ENSMICG00000007713	-	100	98.611	Microcebus_murinus
ENSOGAG00000011063	PUM1	99	94.617	ENSMICG00000012213	-	100	94.890	Microcebus_murinus
ENSOGAG00000011063	PUM1	100	95.550	ENSMOCG00000015463	Pum1	100	97.917	Microtus_ochrogaster
ENSOGAG00000011063	PUM1	100	94.635	ENSMODG00000017067	PUM1	100	94.552	Monodelphis_domestica
ENSOGAG00000011063	PUM1	100	95.718	MGP_CAROLIEiJ_G0026549	Pum1	100	97.917	Mus_caroli
ENSOGAG00000011063	PUM1	100	95.970	ENSMUSG00000028580	Pum1	100	98.611	Mus_musculus
ENSOGAG00000011063	PUM1	100	95.802	MGP_PahariEiJ_G0028881	Pum1	100	98.611	Mus_pahari
ENSOGAG00000011063	PUM1	100	95.886	MGP_SPRETEiJ_G0027529	Pum1	100	98.611	Mus_spretus
ENSOGAG00000011063	PUM1	100	96.222	ENSMPUG00000015454	PUM1	100	96.222	Mustela_putorius_furo
ENSOGAG00000011063	PUM1	100	96.222	ENSMLUG00000006490	PUM1	100	96.222	Myotis_lucifugus
ENSOGAG00000011063	PUM1	100	96.306	ENSNGAG00000002378	Pum1	100	97.917	Nannospalax_galili
ENSOGAG00000011063	PUM1	80	77.189	ENSNBRG00000010689	pum1	100	79.336	Neolamprologus_brichardi
ENSOGAG00000011063	PUM1	100	95.466	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSOGAG00000011063	PUM1	84	96.622	ENSMEUG00000000976	-	82	96.622	Notamacropus_eugenii
ENSOGAG00000011063	PUM1	79	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSOGAG00000011063	PUM1	100	96.138	ENSODEG00000003465	PUM1	100	97.917	Octodon_degus
ENSOGAG00000011063	PUM1	100	72.200	ENSONIG00000002290	pum1	100	74.068	Oreochromis_niloticus
ENSOGAG00000011063	PUM1	81	74.335	ENSOANG00000004902	-	100	74.006	Ornithorhynchus_anatinus
ENSOGAG00000011063	PUM1	100	95.886	ENSOCUG00000008641	PUM1	99	95.886	Oryctolagus_cuniculus
ENSOGAG00000011063	PUM1	100	72.291	ENSORLG00000011482	pum1	100	73.493	Oryzias_latipes
ENSOGAG00000011063	PUM1	100	72.374	ENSORLG00020019461	pum1	100	73.493	Oryzias_latipes_hni
ENSOGAG00000011063	PUM1	100	72.374	ENSORLG00015011375	pum1	100	73.576	Oryzias_latipes_hsok
ENSOGAG00000011063	PUM1	100	95.634	ENSOARG00000001899	PUM1	100	96.409	Ovis_aries
ENSOGAG00000011063	PUM1	100	96.893	ENSPPAG00000044003	PUM1	100	99.306	Pan_paniscus
ENSOGAG00000011063	PUM1	100	96.558	ENSPPRG00000001370	PUM1	100	99.306	Panthera_pardus
ENSOGAG00000011063	PUM1	100	96.390	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSOGAG00000011063	PUM1	100	96.893	ENSPTRG00000000453	PUM1	100	99.306	Pan_troglodytes
ENSOGAG00000011063	PUM1	100	96.893	ENSPANG00000016338	PUM1	100	99.306	Papio_anubis
ENSOGAG00000011063	PUM1	95	85.817	ENSPKIG00000010578	pum1	100	76.353	Paramormyrops_kingsleyae
ENSOGAG00000011063	PUM1	100	94.878	ENSPSIG00000014118	PUM1	100	94.878	Pelodiscus_sinensis
ENSOGAG00000011063	PUM1	80	75.580	ENSPMGG00000005836	pum1	100	77.832	Periophthalmus_magnuspinnatus
ENSOGAG00000011063	PUM1	100	96.138	ENSPEMG00000010009	Pum1	100	98.611	Peromyscus_maniculatus_bairdii
ENSOGAG00000011063	PUM1	100	94.719	ENSPCIG00000014151	PUM1	100	96.266	Phascolarctos_cinereus
ENSOGAG00000011063	PUM1	95	74.476	ENSPFOG00000007289	pum1	99	77.439	Poecilia_formosa
ENSOGAG00000011063	PUM1	100	70.806	ENSPLAG00000007256	pum1	100	74.793	Poecilia_latipinna
ENSOGAG00000011063	PUM1	90	74.357	ENSPMEG00000019543	pum1	99	75.321	Poecilia_mexicana
ENSOGAG00000011063	PUM1	100	71.867	ENSPREG00000005195	pum1	100	76.932	Poecilia_reticulata
ENSOGAG00000011063	PUM1	100	94.979	ENSPPYG00000001621	PUM1	100	94.979	Pongo_abelii
ENSOGAG00000011063	PUM1	77	98.347	ENSPCAG00000001979	PUM1	74	98.347	Procavia_capensis
ENSOGAG00000011063	PUM1	100	96.809	ENSPCOG00000004398	PUM1	100	98.611	Propithecus_coquereli
ENSOGAG00000011063	PUM1	100	94.374	ENSPVAG00000005207	PUM1	97	94.374	Pteropus_vampyrus
ENSOGAG00000011063	PUM1	100	71.867	ENSPNYG00000009518	pum1	100	73.861	Pundamilia_nyererei
ENSOGAG00000011063	PUM1	100	76.461	ENSPNAG00000026728	pum1	100	77.315	Pygocentrus_nattereri
ENSOGAG00000011063	PUM1	100	95.718	ENSRNOG00000011709	Pum1	100	95.718	Rattus_norvegicus
ENSOGAG00000011063	PUM1	100	96.893	ENSRBIG00000042521	PUM1	100	99.306	Rhinopithecus_bieti
ENSOGAG00000011063	PUM1	100	96.893	ENSRROG00000020156	PUM1	100	99.306	Rhinopithecus_roxellana
ENSOGAG00000011063	PUM1	100	96.809	ENSSBOG00000032037	PUM1	100	99.306	Saimiri_boliviensis_boliviensis
ENSOGAG00000011063	PUM1	100	94.552	ENSSHAG00000010918	PUM1	100	94.468	Sarcophilus_harrisii
ENSOGAG00000011063	PUM1	100	71.997	ENSSMAG00000010918	pum1	100	83.453	Scophthalmus_maximus
ENSOGAG00000011063	PUM1	100	71.867	ENSSDUG00000009021	pum1	100	74.068	Seriola_dumerili
ENSOGAG00000011063	PUM1	95	72.671	ENSSLDG00000009667	pum1	100	75.310	Seriola_lalandi_dorsalis
ENSOGAG00000011063	PUM1	94	99.558	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSOGAG00000011063	PUM1	100	94.207	ENSSPUG00000006267	PUM1	100	94.207	Sphenodon_punctatus
ENSOGAG00000011063	PUM1	100	71.950	ENSSPAG00000016636	pum1	100	74.151	Stegastes_partitus
ENSOGAG00000011063	PUM1	100	96.725	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSOGAG00000011063	PUM1	100	71.761	ENSTRUG00000013121	pum1	100	79.213	Takifugu_rubripes
ENSOGAG00000011063	PUM1	100	71.867	ENSTNIG00000016983	pum1	99	73.985	Tetraodon_nigroviridis
ENSOGAG00000011063	PUM1	87	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSOGAG00000011063	PUM1	91	96.143	ENSTTRG00000007436	PUM1	89	96.143	Tursiops_truncatus
ENSOGAG00000011063	PUM1	98	96.472	ENSUAMG00000018262	-	100	96.472	Ursus_americanus
ENSOGAG00000011063	PUM1	95	96.523	ENSUMAG00000009211	PUM1	100	96.133	Ursus_maritimus
ENSOGAG00000011063	PUM1	92	99.322	ENSVPAG00000005902	PUM1	92	99.322	Vicugna_pacos
ENSOGAG00000011063	PUM1	100	96.474	ENSVVUG00000014631	PUM1	100	96.474	Vulpes_vulpes
ENSOGAG00000011063	PUM1	100	84.744	ENSXETG00000012904	pum1	99	83.906	Xenopus_tropicalis
ENSOGAG00000011063	PUM1	100	71.120	ENSXMAG00000002945	pum1	100	74.587	Xiphophorus_maculatus