EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000011347 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 3817 bases
Position: chrGL873610.1:6093200-6097016
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000020889	zf-C2H2	PF00096.26	2.9e-21	1	3
ENSOGAP00000020889	zf-C2H2	PF00096.26	2.9e-21	2	3
ENSOGAP00000020889	zf-C2H2	PF00096.26	2.9e-21	3	3
ENSOGAP00000010165	zf-C2H2	PF00096.26	3.1e-21	1	3
ENSOGAP00000010165	zf-C2H2	PF00096.26	3.1e-21	2	3
ENSOGAP00000010165	zf-C2H2	PF00096.26	3.1e-21	3	3
ENSOGAP00000020889	zf-met	PF12874.7	2.6e-09	1	1
ENSOGAP00000010165	zf-met	PF12874.7	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000031870	-	1443	-	ENSOGAP00000020889	480 (aa)	-	H0XXP6
ENSOGAT00000011350	-	1461	-	ENSOGAP00000010165	486 (aa)	-	H0X4M9

Gene Model

Click here to download ENSOGAG00000011347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000011347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000011347	-	58	40.336	ENSOGAG00000008879	GFI1B	90	40.336
ENSOGAG00000011347	-	56	42.143	ENSOGAG00000002111	-	88	43.796
ENSOGAG00000011347	-	91	35.514	ENSOGAG00000029163	-	97	35.514
ENSOGAG00000011347	-	98	80.213	ENSOGAG00000026429	-	99	80.213

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000011347	-	99	42.000	ENSCHIG00000024202	-	100	42.000	Capra_hircus
ENSOGAG00000011347	-	82	41.606	ENSCHIG00000015589	-	100	41.606	Capra_hircus
ENSOGAG00000011347	-	99	42.000	ENSCHIG00000014993	-	100	42.000	Capra_hircus
ENSOGAG00000011347	-	96	53.958	ENSDNOG00000010100	-	99	53.012	Dasypus_novemcinctus
ENSOGAG00000011347	-	99	53.347	ENSEASG00005020480	-	99	53.347	Equus_asinus_asinus
ENSOGAG00000011347	-	99	52.529	ENSECAG00000006782	-	99	52.529	Equus_caballus
ENSOGAG00000011347	-	93	50.109	ENSFCAG00000041174	-	96	50.109	Felis_catus
ENSOGAG00000011347	-	98	40.637	ENSMAUG00000015051	Zscan5b	99	42.045	Mesocricetus_auratus
ENSOGAG00000011347	-	95	52.542	ENSMPUG00000006686	-	96	52.542	Mustela_putorius_furo
ENSOGAG00000011347	-	99	40.900	ENSMLUG00000024124	-	99	40.900	Myotis_lucifugus
ENSOGAG00000011347	-	70	56.790	ENSMLUG00000006448	-	94	56.790	Myotis_lucifugus
ENSOGAG00000011347	-	92	43.197	ENSMLUG00000029894	-	99	43.197	Myotis_lucifugus
ENSOGAG00000011347	-	93	50.547	ENSPTIG00000015051	-	96	50.547	Panthera_tigris_altaica
ENSOGAG00000011347	-	95	50.526	ENSPVAG00000017654	-	97	50.526	Pteropus_vampyrus
ENSOGAG00000011347	-	59	47.782	ENSVPAG00000002606	-	99	48.288	Vicugna_pacos