EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOGAG00000012127 (Gene tree)
Gene ID
100948212
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Otolemur_garnettii
Status
putative
Strand
Plus strand
Length
36957 bases
Position
chrGL873592.1:6656929-6693885
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOGAP00000010855CSDPF00313.222.2e-8515
ENSOGAP00000010855CSDPF00313.222.2e-8525
ENSOGAP00000010855CSDPF00313.222.2e-8535
ENSOGAP00000010855CSDPF00313.222.2e-8545
ENSOGAP00000010855CSDPF00313.222.2e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOGAT00000012133CSDE1-2014237-ENSOGAP00000010855813 (aa)-H0X689
Gene Model
Click here to download ENSOGAG00000012127's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000012127's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOGAG00000012127CSDE110098.893ENSG00000009307CSDE1100100.000Homo_sapiens
ENSOGAG00000012127CSDE19478.052ENSAPOG00000015538csde110078.052Acanthochromis_polyacanthus
ENSOGAG00000012127CSDE110097.789ENSAMEG00000017129CSDE110097.789Ailuropoda_melanoleuca
ENSOGAG00000012127CSDE18576.757ENSACIG00000015175csde110076.757Amphilophus_citrinellus
ENSOGAG00000012127CSDE19478.182ENSAOCG00000011510csde110078.182Amphiprion_ocellaris
ENSOGAG00000012127CSDE19973.722ENSAPEG00000007194csde110078.182Amphiprion_percula
ENSOGAG00000012127CSDE19477.662ENSATEG00000003864csde110077.662Anabas_testudineus
ENSOGAG00000012127CSDE19492.047ENSAPLG00000008797CSDE110092.047Anas_platyrhynchos
ENSOGAG00000012127CSDE19488.346ENSACAG00000003120CSDE110088.346Anolis_carolinensis
ENSOGAG00000012127CSDE18773.404ENSANAG00000028396-9073.404Aotus_nancymaae
ENSOGAG00000012127CSDE110098.524ENSANAG00000024665CSDE110098.524Aotus_nancymaae
ENSOGAG00000012127CSDE19477.503ENSACLG00000013296csde110077.503Astatotilapia_calliptera
ENSOGAG00000012127CSDE19477.173ENSAMXG00000007436csde110077.173Astyanax_mexicanus
ENSOGAG00000012127CSDE110094.787ENSBTAG00000000678CSDE110098.696Bos_taurus
ENSOGAG00000012127CSDE110098.647ENSCJAG00000012565CSDE110098.647Callithrix_jacchus
ENSOGAG00000012127CSDE19898.872ENSCAFG00000009618CSDE110098.872Canis_familiaris
ENSOGAG00000012127CSDE19499.218ENSCAFG00020000481CSDE110099.218Canis_lupus_dingo
ENSOGAG00000012127CSDE110098.278ENSCHIG00000017250CSDE110098.696Capra_hircus
ENSOGAG00000012127CSDE110094.313ENSTSYG00000003747CSDE110098.696Carlito_syrichta
ENSOGAG00000012127CSDE19468.593ENSCAPG00000015128CSDE110068.593Cavia_aperea
ENSOGAG00000012127CSDE19492.649ENSCPOG00000040388CSDE110092.649Cavia_porcellus
ENSOGAG00000012127CSDE19173.719ENSCCAG00000030878-9173.719Cebus_capucinus
ENSOGAG00000012127CSDE19076.485ENSCCAG00000033677-9976.010Cebus_capucinus
ENSOGAG00000012127CSDE110098.647ENSCCAG00000036794CSDE110098.664Cebus_capucinus
ENSOGAG00000012127CSDE110098.893ENSCATG00000036962CSDE110098.893Cercocebus_atys
ENSOGAG00000012127CSDE19498.957ENSCLAG00000006618CSDE110098.957Chinchilla_lanigera
ENSOGAG00000012127CSDE110095.261ENSCSAG00000001658CSDE110095.261Chlorocebus_sabaeus
ENSOGAG00000012127CSDE110090.945ENSCHOG00000000918CSDE19590.945Choloepus_hoffmanni
ENSOGAG00000012127CSDE19492.699ENSCPBG00000016547CSDE110092.699Chrysemys_picta_bellii
ENSOGAG00000012127CSDE19241.943ENSCING00000014465-9641.943Ciona_intestinalis
ENSOGAG00000012127CSDE19042.092ENSCSAVG00000008100-9842.092Ciona_savignyi
ENSOGAG00000012127CSDE110098.770ENSCANG00000035096CSDE110098.770Colobus_angolensis_palliatus
ENSOGAG00000012127CSDE18496.283ENSCANG00000031069-9496.283Colobus_angolensis_palliatus
ENSOGAG00000012127CSDE19481.486ENSCGRG00001014011-10081.486Cricetulus_griseus_chok1gshd
ENSOGAG00000012127CSDE19498.696ENSCGRG00001016833-10098.696Cricetulus_griseus_chok1gshd
ENSOGAG00000012127CSDE19198.441ENSCGRG00000002225-10098.441Cricetulus_griseus_crigri
ENSOGAG00000012127CSDE19485.217ENSCGRG00000005831-10085.217Cricetulus_griseus_crigri
ENSOGAG00000012127CSDE19477.633ENSCSEG00000002620csde110077.633Cynoglossus_semilaevis
ENSOGAG00000012127CSDE19873.141ENSCVAG00000001344csde110076.883Cyprinodon_variegatus
ENSOGAG00000012127CSDE19971.544ENSDARG00000074758csde110075.344Danio_rerio
ENSOGAG00000012127CSDE17570.722ENSDNOG00000034464-10070.722Dasypus_novemcinctus
ENSOGAG00000012127CSDE19598.446ENSDNOG00000010287-9498.446Dasypus_novemcinctus
ENSOGAG00000012127CSDE19498.353ENSDORG00000011609Csde110098.353Dipodomys_ordii
ENSOGAG00000012127CSDE19148.361FBgn0263352Unr7447.984Drosophila_melanogaster
ENSOGAG00000012127CSDE19398.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSOGAG00000012127CSDE18587.500ENSETEG00000006280-10087.500Echinops_telfairi
ENSOGAG00000012127CSDE19477.285ENSETEG00000013678-9977.285Echinops_telfairi
ENSOGAG00000012127CSDE17468.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSOGAG00000012127CSDE19454.433ENSEBUG00000008647csde19952.745Eptatretus_burgeri
ENSOGAG00000012127CSDE110098.401ENSEASG00005006284CSDE110098.401Equus_asinus_asinus
ENSOGAG00000012127CSDE110098.401ENSECAG00000020885CSDE110098.401Equus_caballus
ENSOGAG00000012127CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSOGAG00000012127CSDE19476.067ENSELUG00000015507csde110076.067Esox_lucius
ENSOGAG00000012127CSDE110099.139ENSFCAG00000029266CSDE110099.478Felis_catus
ENSOGAG00000012127CSDE19488.221ENSFALG00000003407CSDE110088.221Ficedula_albicollis
ENSOGAG00000012127CSDE19499.102ENSFDAG00000007882CSDE110099.102Fukomys_damarensis
ENSOGAG00000012127CSDE19872.652ENSFHEG00000010799csde19977.321Fundulus_heteroclitus
ENSOGAG00000012127CSDE19474.529ENSGMOG00000012731csde110074.529Gadus_morhua
ENSOGAG00000012127CSDE19288.363ENSGALG00000002139CSDE19888.363Gallus_gallus
ENSOGAG00000012127CSDE18776.524ENSGAFG00000005241csde19576.524Gambusia_affinis
ENSOGAG00000012127CSDE19475.313ENSGACG00000004544csde110075.313Gasterosteus_aculeatus
ENSOGAG00000012127CSDE110090.663ENSGAGG00000017685CSDE110091.155Gopherus_agassizii
ENSOGAG00000012127CSDE110098.893ENSGGOG00000002164CSDE110099.348Gorilla_gorilla
ENSOGAG00000012127CSDE19477.503ENSHBUG00000020315csde110077.503Haplochromis_burtoni
ENSOGAG00000012127CSDE19485.545ENSHGLG00000007471-9885.545Heterocephalus_glaber_female
ENSOGAG00000012127CSDE19480.303ENSHGLG00000019549-10080.303Heterocephalus_glaber_female
ENSOGAG00000012127CSDE19476.537ENSHGLG00000000650-9976.662Heterocephalus_glaber_female
ENSOGAG00000012127CSDE19489.179ENSHGLG00000009620-10089.439Heterocephalus_glaber_female
ENSOGAG00000012127CSDE19190.200ENSHGLG00000010039-10090.200Heterocephalus_glaber_female
ENSOGAG00000012127CSDE19489.570ENSHGLG00000003829-10089.570Heterocephalus_glaber_female
ENSOGAG00000012127CSDE19489.671ENSHGLG00000008555-10089.671Heterocephalus_glaber_female
ENSOGAG00000012127CSDE19182.405ENSHGLG00100004833-10082.405Heterocephalus_glaber_male
ENSOGAG00000012127CSDE19189.978ENSHGLG00100006910-10089.978Heterocephalus_glaber_male
ENSOGAG00000012127CSDE19484.746ENSHGLG00100012072-10084.746Heterocephalus_glaber_male
ENSOGAG00000012127CSDE18884.379ENSHGLG00100004195-10084.379Heterocephalus_glaber_male
ENSOGAG00000012127CSDE19480.339ENSHGLG00100001846-10080.339Heterocephalus_glaber_male
ENSOGAG00000012127CSDE19499.218ENSHGLG00100019438-10099.218Heterocephalus_glaber_male
ENSOGAG00000012127CSDE19482.917ENSHGLG00100007287-9882.917Heterocephalus_glaber_male
ENSOGAG00000012127CSDE19481.101ENSHGLG00100002245-9981.101Heterocephalus_glaber_male
ENSOGAG00000012127CSDE19872.957ENSHCOG00000004158csde110076.463Hippocampus_comes
ENSOGAG00000012127CSDE19476.913ENSIPUG00000000355csde110076.913Ictalurus_punctatus
ENSOGAG00000012127CSDE19480.691ENSSTOG00000030994-10080.691Ictidomys_tridecemlineatus
ENSOGAG00000012127CSDE18781.290ENSSTOG00000032722-9881.290Ictidomys_tridecemlineatus
ENSOGAG00000012127CSDE19498.653ENSJJAG00000019571Csde110098.653Jaculus_jaculus
ENSOGAG00000012127CSDE19873.063ENSKMAG00000005685csde110073.978Kryptolebias_marmoratus
ENSOGAG00000012127CSDE19477.792ENSLBEG00000014770csde110077.792Labrus_bergylta
ENSOGAG00000012127CSDE19775.453ENSLACG00000018452CSDE19675.639Latimeria_chalumnae
ENSOGAG00000012127CSDE110075.294ENSLOCG00000010413csde19677.559Lepisosteus_oculatus
ENSOGAG00000012127CSDE19597.406ENSLAFG00000007150CSDE19697.406Loxodonta_africana
ENSOGAG00000012127CSDE110098.893ENSMFAG00000003674CSDE110099.348Macaca_fascicularis
ENSOGAG00000012127CSDE110098.893ENSMMUG00000001974CSDE110099.348Macaca_mulatta
ENSOGAG00000012127CSDE110098.893ENSMNEG00000045247CSDE110098.893Macaca_nemestrina
ENSOGAG00000012127CSDE110098.647ENSMLEG00000038673CSDE110098.647Mandrillus_leucophaeus
ENSOGAG00000012127CSDE19478.442ENSMAMG00000008821csde110078.442Mastacembelus_armatus
ENSOGAG00000012127CSDE19477.503ENSMZEG00005021675csde110077.503Maylandia_zebra
ENSOGAG00000012127CSDE19491.797ENSMGAG00000016381CSDE110091.797Meleagris_gallopavo
ENSOGAG00000012127CSDE19498.802ENSMAUG00000014031Csde110098.802Mesocricetus_auratus
ENSOGAG00000012127CSDE110098.770ENSMICG00000002050CSDE110098.770Microcebus_murinus
ENSOGAG00000012127CSDE19498.696ENSMOCG00000018960Csde110098.696Microtus_ochrogaster
ENSOGAG00000012127CSDE19477.792ENSMMOG00000015075csde110077.792Mola_mola
ENSOGAG00000012127CSDE19594.825ENSMODG00000004685CSDE110092.231Monodelphis_domestica
ENSOGAG00000012127CSDE19478.182ENSMALG00000007132csde110078.182Monopterus_albus
ENSOGAG00000012127CSDE19498.435MGP_CAROLIEiJ_G0025444Csde110098.675Mus_caroli
ENSOGAG00000012127CSDE19498.653ENSMUSG00000068823Csde110098.675Mus_musculus
ENSOGAG00000012127CSDE19498.827MGP_PahariEiJ_G0026888Csde110098.827Mus_pahari
ENSOGAG00000012127CSDE19498.827MGP_SPRETEiJ_G0026394Csde110098.827Mus_spretus
ENSOGAG00000012127CSDE19295.530ENSMPUG00000005753CSDE19995.530Mustela_putorius_furo
ENSOGAG00000012127CSDE110098.155ENSMLUG00000005681CSDE110098.155Myotis_lucifugus
ENSOGAG00000012127CSDE19498.952ENSNGAG00000021929Csde110098.952Nannospalax_galili
ENSOGAG00000012127CSDE19171.269ENSNGAG00000012599-10071.269Nannospalax_galili
ENSOGAG00000012127CSDE19477.503ENSNBRG00000020808csde110077.503Neolamprologus_brichardi
ENSOGAG00000012127CSDE110098.770ENSNLEG00000004842CSDE110098.770Nomascus_leucogenys
ENSOGAG00000012127CSDE19291.622ENSMEUG00000002677CSDE110091.622Notamacropus_eugenii
ENSOGAG00000012127CSDE19894.444ENSOPRG00000005002CSDE18894.444Ochotona_princeps
ENSOGAG00000012127CSDE19168.142ENSODEG00000005979-9868.142Octodon_degus
ENSOGAG00000012127CSDE19498.802ENSODEG00000007383-10098.802Octodon_degus
ENSOGAG00000012127CSDE19472.950ENSONIG00000009309csde110072.950Oreochromis_niloticus
ENSOGAG00000012127CSDE19475.935ENSOANG00000003346-10075.935Ornithorhynchus_anatinus
ENSOGAG00000012127CSDE110094.194ENSOCUG00000016438CSDE110094.194Oryctolagus_cuniculus
ENSOGAG00000012127CSDE19477.633ENSORLG00000000707csde110077.633Oryzias_latipes
ENSOGAG00000012127CSDE19873.012ENSORLG00020005148csde110072.950Oryzias_latipes_hni
ENSOGAG00000012127CSDE19477.633ENSORLG00015019415csde110077.633Oryzias_latipes_hsok
ENSOGAG00000012127CSDE19478.312ENSOMEG00000015656csde110078.312Oryzias_melastigma
ENSOGAG00000012127CSDE110098.401ENSOARG00000020034CSDE110098.401Ovis_aries
ENSOGAG00000012127CSDE110098.893ENSPPAG00000025861CSDE110099.348Pan_paniscus
ENSOGAG00000012127CSDE110099.139ENSPPRG00000006747CSDE110099.139Panthera_pardus
ENSOGAG00000012127CSDE110099.139ENSPTIG00000015468CSDE110099.139Panthera_tigris_altaica
ENSOGAG00000012127CSDE110098.770ENSPTRG00000033721CSDE110098.770Pan_troglodytes
ENSOGAG00000012127CSDE110098.893ENSPANG00000018873CSDE110099.348Papio_anubis
ENSOGAG00000012127CSDE19477.503ENSPKIG00000009459csde110077.503Paramormyrops_kingsleyae
ENSOGAG00000012127CSDE19189.159ENSPSIG00000003823CSDE19689.159Pelodiscus_sinensis
ENSOGAG00000012127CSDE19477.403ENSPMGG00000000772csde110077.403Periophthalmus_magnuspinnatus
ENSOGAG00000012127CSDE19498.802ENSPEMG00000020357-10098.802Peromyscus_maniculatus_bairdii
ENSOGAG00000012127CSDE110090.673ENSPCIG00000022587CSDE110092.356Phascolarctos_cinereus
ENSOGAG00000012127CSDE19375.716ENSPFOG00000012664csde110075.776Poecilia_formosa
ENSOGAG00000012127CSDE19271.275ENSPLAG00000017680csde19371.275Poecilia_latipinna
ENSOGAG00000012127CSDE19271.168ENSPMEG00000005094csde19671.168Poecilia_mexicana
ENSOGAG00000012127CSDE19972.426ENSPREG00000011631csde110071.480Poecilia_reticulata
ENSOGAG00000012127CSDE19495.363ENSPPYG00000000996CSDE110095.363Pongo_abelii
ENSOGAG00000012127CSDE110093.973ENSPCAG00000014368CSDE110093.481Procavia_capensis
ENSOGAG00000012127CSDE19499.348ENSPCOG00000017893CSDE110099.348Propithecus_coquereli
ENSOGAG00000012127CSDE18582.847ENSPCOG00000008223-9282.847Propithecus_coquereli
ENSOGAG00000012127CSDE110092.620ENSPVAG00000008225CSDE110092.620Pteropus_vampyrus
ENSOGAG00000012127CSDE19477.503ENSPNYG00000013745csde110077.503Pundamilia_nyererei
ENSOGAG00000012127CSDE19972.663ENSPNAG00000001958csde110077.662Pygocentrus_nattereri
ENSOGAG00000012127CSDE19494.862ENSRNOG00000061058Csde110094.862Rattus_norvegicus
ENSOGAG00000012127CSDE110093.497ENSRBIG00000038966-10093.497Rhinopithecus_bieti
ENSOGAG00000012127CSDE19495.573ENSRBIG00000038088-9997.465Rhinopithecus_bieti
ENSOGAG00000012127CSDE110098.893ENSRROG00000043101CSDE110098.893Rhinopithecus_roxellana
ENSOGAG00000012127CSDE110098.647ENSSBOG00000035592CSDE110098.647Saimiri_boliviensis_boliviensis
ENSOGAG00000012127CSDE110093.995ENSSHAG00000009831CSDE110095.958Sarcophilus_harrisii
ENSOGAG00000012127CSDE19477.113ENSSFOG00015007498csde110077.113Scleropages_formosus
ENSOGAG00000012127CSDE19478.312ENSSMAG00000007203csde110078.312Scophthalmus_maximus
ENSOGAG00000012127CSDE19477.792ENSSDUG00000015380csde110077.792Seriola_dumerili
ENSOGAG00000012127CSDE19874.034ENSSLDG00000008819csde110077.792Seriola_lalandi_dorsalis
ENSOGAG00000012127CSDE110096.683ENSSARG00000000738CSDE110096.683Sorex_araneus
ENSOGAG00000012127CSDE110087.219ENSSPUG00000008714CSDE110091.786Sphenodon_punctatus
ENSOGAG00000012127CSDE19973.841ENSSPAG00000000716csde110078.052Stegastes_partitus
ENSOGAG00000012127CSDE110095.379ENSSSCG00000006752CSDE110099.218Sus_scrofa
ENSOGAG00000012127CSDE19487.250ENSTGUG00000000972CSDE110087.250Taeniopygia_guttata
ENSOGAG00000012127CSDE19474.772ENSTRUG00000007996csde110074.772Takifugu_rubripes
ENSOGAG00000012127CSDE18773.563ENSTNIG00000010878csde110073.563Tetraodon_nigroviridis
ENSOGAG00000012127CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSOGAG00000012127CSDE110098.032ENSTTRG00000015583CSDE110098.032Tursiops_truncatus
ENSOGAG00000012127CSDE18494.686ENSUAMG00000024289-9994.686Ursus_americanus
ENSOGAG00000012127CSDE18499.035ENSUAMG00000021779-10099.035Ursus_americanus
ENSOGAG00000012127CSDE18199.287ENSUMAG00000011714-9999.287Ursus_maritimus
ENSOGAG00000012127CSDE19591.310ENSUMAG00000009720-9891.310Ursus_maritimus
ENSOGAG00000012127CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSOGAG00000012127CSDE18794.591ENSVVUG00000009890CSDE19494.591Vulpes_vulpes
ENSOGAG00000012127CSDE19482.397ENSXETG00000021448csde110082.397Xenopus_tropicalis
ENSOGAG00000012127CSDE18785.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSOGAG00000012127CSDE19973.547ENSXMAG00000009080csde19877.851Xiphophorus_maculatus

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