EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000012592 (Gene tree)
Gene ID: 100941329
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 5782 bases
Position: chrGL873534.1:1266928-1272709
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000011281	PseudoU_synth_2	PF00849.22	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000012596	RPUSD3-201	942	-	ENSOGAP00000011281	314 (aa)	-	H0X7A3

Gene Model

Click here to download ENSOGAG00000012592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000012592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000012592	RPUSD3	87	30.034	ENSOGAG00000008922	RPUSD4	71	30.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000012592	RPUSD3	100	85.032	ENSG00000156990	RPUSD3	95	84.236	Homo_sapiens
ENSOGAG00000012592	RPUSD3	100	80.255	ENSAMEG00000016227	RPUSD3	89	80.255	Ailuropoda_melanoleuca
ENSOGAG00000012592	RPUSD3	89	53.191	ENSACAG00000009836	RPUSD3	80	53.191	Anolis_carolinensis
ENSOGAG00000012592	RPUSD3	61	79.474	ENSANAG00000038118	-	91	79.474	Aotus_nancymaae
ENSOGAG00000012592	RPUSD3	62	81.122	ENSANAG00000019945	-	78	81.122	Aotus_nancymaae
ENSOGAG00000012592	RPUSD3	75	60.241	ENSANAG00000007127	-	96	59.804	Aotus_nancymaae
ENSOGAG00000012592	RPUSD3	100	81.210	ENSBTAG00000007968	RPUSD3	91	81.210	Bos_taurus
ENSOGAG00000012592	RPUSD3	100	80.892	ENSCAFG00000029733	RPUSD3	89	80.892	Canis_familiaris
ENSOGAG00000012592	RPUSD3	100	81.210	ENSCAFG00020008582	RPUSD3	95	81.210	Canis_lupus_dingo
ENSOGAG00000012592	RPUSD3	100	80.255	ENSCHIG00000026027	RPUSD3	91	80.255	Capra_hircus
ENSOGAG00000012592	RPUSD3	100	78.233	ENSTSYG00000009994	RPUSD3	90	78.233	Carlito_syrichta
ENSOGAG00000012592	RPUSD3	84	79.848	ENSCAPG00000017559	RPUSD3	99	79.848	Cavia_aperea
ENSOGAG00000012592	RPUSD3	97	73.770	ENSCPOG00000037956	RPUSD3	86	73.770	Cavia_porcellus
ENSOGAG00000012592	RPUSD3	100	82.166	ENSCCAG00000029530	RPUSD3	95	81.773	Cebus_capucinus
ENSOGAG00000012592	RPUSD3	99	84.295	ENSCATG00000036939	RPUSD3	95	83.251	Cercocebus_atys
ENSOGAG00000012592	RPUSD3	99	83.974	ENSCSAG00000010506	RPUSD3	89	83.974	Chlorocebus_sabaeus
ENSOGAG00000012592	RPUSD3	56	84.127	ENSCHOG00000010151	-	67	84.127	Choloepus_hoffmanni
ENSOGAG00000012592	RPUSD3	83	54.962	ENSCPBG00000008825	RPUSD3	97	55.344	Chrysemys_picta_bellii
ENSOGAG00000012592	RPUSD3	99	83.974	ENSCANG00000040711	RPUSD3	95	83.251	Colobus_angolensis_palliatus
ENSOGAG00000012592	RPUSD3	99	73.633	ENSCGRG00001004923	Rpusd3	86	73.633	Cricetulus_griseus_chok1gshd
ENSOGAG00000012592	RPUSD3	99	73.633	ENSCGRG00000018315	Rpusd3	91	72.930	Cricetulus_griseus_crigri
ENSOGAG00000012592	RPUSD3	99	77.955	ENSDNOG00000039160	RPUSD3	83	77.955	Dasypus_novemcinctus
ENSOGAG00000012592	RPUSD3	83	77.239	ENSDORG00000026827	Rpusd3	92	77.239	Dipodomys_ordii
ENSOGAG00000012592	RPUSD3	100	72.930	ENSETEG00000006538	RPUSD3	89	72.930	Echinops_telfairi
ENSOGAG00000012592	RPUSD3	68	39.070	ENSEBUG00000015605	RPUSD3	70	39.070	Eptatretus_burgeri
ENSOGAG00000012592	RPUSD3	100	80.892	ENSEASG00005014160	RPUSD3	87	80.892	Equus_asinus_asinus
ENSOGAG00000012592	RPUSD3	100	82.166	ENSECAG00000019988	RPUSD3	87	82.166	Equus_caballus
ENSOGAG00000012592	RPUSD3	99	58.044	ENSEEUG00000007353	RPUSD3	89	58.044	Erinaceus_europaeus
ENSOGAG00000012592	RPUSD3	100	82.166	ENSFCAG00000014199	RPUSD3	89	82.166	Felis_catus
ENSOGAG00000012592	RPUSD3	86	50.916	ENSFALG00000012968	RPUSD3	99	50.916	Ficedula_albicollis
ENSOGAG00000012592	RPUSD3	84	78.113	ENSFDAG00000008350	RPUSD3	82	78.113	Fukomys_damarensis
ENSOGAG00000012592	RPUSD3	83	55.513	ENSGAGG00000007493	RPUSD3	82	56.654	Gopherus_agassizii
ENSOGAG00000012592	RPUSD3	100	85.032	ENSGGOG00000013120	RPUSD3	95	84.236	Gorilla_gorilla
ENSOGAG00000012592	RPUSD3	89	79.286	ENSHGLG00000011722	RPUSD3	72	79.286	Heterocephalus_glaber_female
ENSOGAG00000012592	RPUSD3	89	79.286	ENSHGLG00100016038	RPUSD3	72	79.286	Heterocephalus_glaber_male
ENSOGAG00000012592	RPUSD3	100	79.936	ENSSTOG00000002125	RPUSD3	89	79.936	Ictidomys_tridecemlineatus
ENSOGAG00000012592	RPUSD3	99	74.367	ENSJJAG00000012679	Rpusd3	92	74.367	Jaculus_jaculus
ENSOGAG00000012592	RPUSD3	100	80.255	ENSLAFG00000017501	RPUSD3	91	80.255	Loxodonta_africana
ENSOGAG00000012592	RPUSD3	99	83.974	ENSMFAG00000032407	RPUSD3	89	83.974	Macaca_fascicularis
ENSOGAG00000012592	RPUSD3	100	84.076	ENSMMUG00000010628	RPUSD3	98	84.076	Macaca_mulatta
ENSOGAG00000012592	RPUSD3	99	83.974	ENSMNEG00000040308	RPUSD3	89	83.974	Macaca_nemestrina
ENSOGAG00000012592	RPUSD3	99	84.615	ENSMLEG00000033940	RPUSD3	95	83.744	Mandrillus_leucophaeus
ENSOGAG00000012592	RPUSD3	98	75.896	ENSMAUG00000015473	Rpusd3	89	75.896	Mesocricetus_auratus
ENSOGAG00000012592	RPUSD3	100	83.121	ENSMICG00000002315	RPUSD3	94	83.744	Microcebus_murinus
ENSOGAG00000012592	RPUSD3	100	73.248	ENSMOCG00000022613	Rpusd3	91	73.248	Microtus_ochrogaster
ENSOGAG00000012592	RPUSD3	99	58.387	ENSMODG00000005210	RPUSD3	81	58.576	Monodelphis_domestica
ENSOGAG00000012592	RPUSD3	100	74.841	MGP_CAROLIEiJ_G0028725	Rpusd3	91	74.841	Mus_caroli
ENSOGAG00000012592	RPUSD3	100	74.841	ENSMUSG00000051169	Rpusd3	91	74.841	Mus_musculus
ENSOGAG00000012592	RPUSD3	100	74.522	MGP_PahariEiJ_G0022476	Rpusd3	91	74.522	Mus_pahari
ENSOGAG00000012592	RPUSD3	100	74.522	MGP_SPRETEiJ_G0029753	Rpusd3	91	74.522	Mus_spretus
ENSOGAG00000012592	RPUSD3	100	79.936	ENSMPUG00000017132	RPUSD3	89	79.936	Mustela_putorius_furo
ENSOGAG00000012592	RPUSD3	100	83.439	ENSMLUG00000006135	RPUSD3	90	83.439	Myotis_lucifugus
ENSOGAG00000012592	RPUSD3	99	74.277	ENSNGAG00000023704	Rpusd3	92	74.277	Nannospalax_galili
ENSOGAG00000012592	RPUSD3	100	70.382	ENSNLEG00000004214	RPUSD3	95	84.236	Nomascus_leucogenys
ENSOGAG00000012592	RPUSD3	83	65.517	ENSMEUG00000013098	-	100	65.517	Notamacropus_eugenii
ENSOGAG00000012592	RPUSD3	99	62.821	ENSOPRG00000002300	RPUSD3	89	62.821	Ochotona_princeps
ENSOGAG00000012592	RPUSD3	84	78.030	ENSODEG00000018137	RPUSD3	91	78.030	Octodon_degus
ENSOGAG00000012592	RPUSD3	90	50.352	ENSOANG00000012081	-	99	50.352	Ornithorhynchus_anatinus
ENSOGAG00000012592	RPUSD3	95	68.750	ENSOCUG00000027885	RPUSD3	88	68.750	Oryctolagus_cuniculus
ENSOGAG00000012592	RPUSD3	100	82.166	ENSOARG00000005928	RPUSD3	89	82.166	Ovis_aries
ENSOGAG00000012592	RPUSD3	99	85.209	ENSPPAG00000038083	RPUSD3	95	84.236	Pan_paniscus
ENSOGAG00000012592	RPUSD3	100	82.166	ENSPPRG00000024433	RPUSD3	89	82.166	Panthera_pardus
ENSOGAG00000012592	RPUSD3	100	83.121	ENSPTIG00000006828	RPUSD3	91	83.121	Panthera_tigris_altaica
ENSOGAG00000012592	RPUSD3	99	84.887	ENSPTRG00000051760	RPUSD3	95	83.744	Pan_troglodytes
ENSOGAG00000012592	RPUSD3	99	84.936	ENSPANG00000023885	RPUSD3	95	83.744	Papio_anubis
ENSOGAG00000012592	RPUSD3	100	75.159	ENSPEMG00000017245	Rpusd3	91	75.159	Peromyscus_maniculatus_bairdii
ENSOGAG00000012592	RPUSD3	99	59.936	ENSPCIG00000021901	RPUSD3	89	60.129	Phascolarctos_cinereus
ENSOGAG00000012592	RPUSD3	99	85.852	ENSPPYG00000013676	RPUSD3	88	85.852	Pongo_abelii
ENSOGAG00000012592	RPUSD3	80	61.355	ENSPCAG00000013731	-	87	61.355	Procavia_capensis
ENSOGAG00000012592	RPUSD3	100	88.217	ENSPCOG00000018314	RPUSD3	89	88.217	Propithecus_coquereli
ENSOGAG00000012592	RPUSD3	100	80.892	ENSPVAG00000011107	RPUSD3	89	80.892	Pteropus_vampyrus
ENSOGAG00000012592	RPUSD3	96	70.627	ENSRNOG00000009084	Rpusd3	90	70.627	Rattus_norvegicus
ENSOGAG00000012592	RPUSD3	99	85.161	ENSRBIG00000041230	RPUSD3	95	84.236	Rhinopithecus_bieti
ENSOGAG00000012592	RPUSD3	99	85.161	ENSRROG00000043328	RPUSD3	95	84.236	Rhinopithecus_roxellana
ENSOGAG00000012592	RPUSD3	100	81.210	ENSSBOG00000036106	RPUSD3	90	81.210	Saimiri_boliviensis_boliviensis
ENSOGAG00000012592	RPUSD3	98	58.117	ENSSHAG00000015536	RPUSD3	99	58.117	Sarcophilus_harrisii
ENSOGAG00000012592	RPUSD3	100	80.573	ENSSSCG00000011555	RPUSD3	89	80.573	Sus_scrofa
ENSOGAG00000012592	RPUSD3	69	52.074	ENSTGUG00000008744	RPUSD3	93	52.074	Taeniopygia_guttata
ENSOGAG00000012592	RPUSD3	80	79.681	ENSTBEG00000000176	RPUSD3	87	79.681	Tupaia_belangeri
ENSOGAG00000012592	RPUSD3	100	82.166	ENSTTRG00000007544	RPUSD3	89	82.166	Tursiops_truncatus
ENSOGAG00000012592	RPUSD3	100	81.210	ENSUAMG00000011354	RPUSD3	98	81.210	Ursus_americanus
ENSOGAG00000012592	RPUSD3	100	80.892	ENSUMAG00000018830	RPUSD3	89	80.892	Ursus_maritimus
ENSOGAG00000012592	RPUSD3	100	81.847	ENSVVUG00000023735	RPUSD3	91	81.847	Vulpes_vulpes
ENSOGAG00000012592	RPUSD3	89	50.355	ENSXETG00000023546	rpusd3	99	50.355	Xenopus_tropicalis