EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000012884 (Gene tree)
Gene ID: 100956653
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 52284 bases
Position: chrGL873527.1:32464262-32516545
Accession: 100956653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000011549	DND1_DSRM	PF14709.7	8.5e-25	1	1
ENSOGAP00000011549	RRM_1	PF00076.22	3.4e-40	1	3
ENSOGAP00000011549	RRM_1	PF00076.22	3.4e-40	2	3
ENSOGAP00000011549	RRM_1	PF00076.22	3.4e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000012888	A1CF-201	2004	XM_003783669	ENSOGAP00000011549	592 (aa)	XP_003783717	H0X7Y1

Gene Model

Click here to download ENSOGAG00000012884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000012884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000012884	A1CF	74	58.129	ENSOGAG00000029367	-	73	57.965
ENSOGAG00000012884	A1CF	50	54.027	ENSOGAG00000001721	SYNCRIP	51	51.077
ENSOGAG00000012884	A1CF	75	57.330	ENSOGAG00000025193	-	74	56.798
ENSOGAG00000012884	A1CF	68	71.333	ENSOGAG00000005647	RBM46	75	71.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000012884	A1CF	100	95.623	ENSG00000148584	A1CF	100	98.507	Homo_sapiens
ENSOGAG00000012884	A1CF	100	74.043	ENSAPOG00000008259	a1cf	100	73.045	Acanthochromis_polyacanthus
ENSOGAG00000012884	A1CF	100	94.426	ENSAMEG00000000523	A1CF	100	94.426	Ailuropoda_melanoleuca
ENSOGAG00000012884	A1CF	100	75.367	ENSACIG00000008632	a1cf	100	75.367	Amphilophus_citrinellus
ENSOGAG00000012884	A1CF	100	74.713	ENSAOCG00000023744	a1cf	96	83.478	Amphiprion_ocellaris
ENSOGAG00000012884	A1CF	100	75.698	ENSAPEG00000009537	a1cf	100	75.534	Amphiprion_percula
ENSOGAG00000012884	A1CF	100	76.384	ENSATEG00000013720	a1cf	100	75.896	Anabas_testudineus
ENSOGAG00000012884	A1CF	100	88.364	ENSAPLG00000002964	A1CF	100	88.027	Anas_platyrhynchos
ENSOGAG00000012884	A1CF	100	82.968	ENSACAG00000015269	A1CF	100	82.462	Anolis_carolinensis
ENSOGAG00000012884	A1CF	100	94.949	ENSANAG00000019974	A1CF	100	94.613	Aotus_nancymaae
ENSOGAG00000012884	A1CF	100	73.071	ENSACLG00000017428	a1cf	100	73.399	Astatotilapia_calliptera
ENSOGAG00000012884	A1CF	100	73.719	ENSAMXG00000018180	a1cf	100	72.562	Astyanax_mexicanus
ENSOGAG00000012884	A1CF	100	92.605	ENSBTAG00000021195	A1CF	100	92.437	Bos_taurus
ENSOGAG00000012884	A1CF	100	96.296	ENSCJAG00000005045	A1CF	100	96.296	Callithrix_jacchus
ENSOGAG00000012884	A1CF	100	93.581	ENSCAFG00000015581	A1CF	100	93.412	Canis_familiaris
ENSOGAG00000012884	A1CF	100	93.581	ENSCAFG00020026421	A1CF	100	93.412	Canis_lupus_dingo
ENSOGAG00000012884	A1CF	100	93.445	ENSCHIG00000020411	A1CF	100	93.277	Capra_hircus
ENSOGAG00000012884	A1CF	95	94.831	ENSTSYG00000001755	A1CF	100	93.739	Carlito_syrichta
ENSOGAG00000012884	A1CF	100	82.716	ENSCAPG00000017386	A1CF	100	82.716	Cavia_aperea
ENSOGAG00000012884	A1CF	100	94.949	ENSCPOG00000009807	A1CF	100	94.444	Cavia_porcellus
ENSOGAG00000012884	A1CF	100	96.121	ENSCCAG00000018168	A1CF	100	95.784	Cebus_capucinus
ENSOGAG00000012884	A1CF	100	94.764	ENSCATG00000043715	A1CF	100	94.764	Cercocebus_atys
ENSOGAG00000012884	A1CF	100	94.295	ENSCLAG00000010424	A1CF	100	93.624	Chinchilla_lanigera
ENSOGAG00000012884	A1CF	100	96.115	ENSCSAG00000007032	A1CF	100	96.115	Chlorocebus_sabaeus
ENSOGAG00000012884	A1CF	98	87.627	ENSCHOG00000009089	A1CF	98	87.288	Choloepus_hoffmanni
ENSOGAG00000012884	A1CF	100	89.039	ENSCPBG00000026464	A1CF	100	88.702	Chrysemys_picta_bellii
ENSOGAG00000012884	A1CF	100	96.115	ENSCANG00000038032	A1CF	100	96.115	Colobus_angolensis_palliatus
ENSOGAG00000012884	A1CF	100	92.605	ENSCGRG00001017413	A1cf	100	92.437	Cricetulus_griseus_chok1gshd
ENSOGAG00000012884	A1CF	100	91.765	ENSCGRG00000017332	A1cf	100	92.773	Cricetulus_griseus_crigri
ENSOGAG00000012884	A1CF	100	75.954	ENSCSEG00000002361	a1cf	100	75.249	Cynoglossus_semilaevis
ENSOGAG00000012884	A1CF	100	74.756	ENSCVAG00000010520	a1cf	100	75.407	Cyprinodon_variegatus
ENSOGAG00000012884	A1CF	100	77.926	ENSDARG00000002968	a1cf	100	78.595	Danio_rerio
ENSOGAG00000012884	A1CF	100	92.773	ENSDNOG00000002829	A1CF	100	92.437	Dasypus_novemcinctus
ENSOGAG00000012884	A1CF	81	91.667	ENSETEG00000012527	A1CF	81	91.667	Echinops_telfairi
ENSOGAG00000012884	A1CF	100	94.472	ENSEASG00005012924	A1CF	100	94.305	Equus_asinus_asinus
ENSOGAG00000012884	A1CF	100	93.970	ENSECAG00000010424	A1CF	100	93.802	Equus_caballus
ENSOGAG00000012884	A1CF	78	79.399	ENSEEUG00000000013	A1CF	96	80.537	Erinaceus_europaeus
ENSOGAG00000012884	A1CF	100	79.599	ENSELUG00000003159	a1cf	100	79.264	Esox_lucius
ENSOGAG00000012884	A1CF	100	91.892	ENSFCAG00000011179	A1CF	100	91.892	Felis_catus
ENSOGAG00000012884	A1CF	100	85.160	ENSFALG00000013183	A1CF	100	84.992	Ficedula_albicollis
ENSOGAG00000012884	A1CF	100	92.269	ENSFDAG00000019371	A1CF	100	91.765	Fukomys_damarensis
ENSOGAG00000012884	A1CF	100	69.544	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSOGAG00000012884	A1CF	100	70.909	ENSGMOG00000018943	a1cf	100	70.579	Gadus_morhua
ENSOGAG00000012884	A1CF	95	87.722	ENSGALG00000003765	A1CF	97	87.367	Gallus_gallus
ENSOGAG00000012884	A1CF	100	69.737	ENSGAFG00000014868	a1cf	100	69.737	Gambusia_affinis
ENSOGAG00000012884	A1CF	100	73.191	ENSGACG00000010241	a1cf	100	72.862	Gasterosteus_aculeatus
ENSOGAG00000012884	A1CF	94	88.750	ENSGAGG00000016508	A1CF	97	88.393	Gopherus_agassizii
ENSOGAG00000012884	A1CF	100	95.455	ENSGGOG00000009670	A1CF	100	95.118	Gorilla_gorilla
ENSOGAG00000012884	A1CF	100	74.062	ENSHBUG00000021959	a1cf	100	75.041	Haplochromis_burtoni
ENSOGAG00000012884	A1CF	100	94.286	ENSHGLG00000008955	A1CF	100	93.613	Heterocephalus_glaber_female
ENSOGAG00000012884	A1CF	100	93.613	ENSHGLG00100000518	A1CF	100	92.941	Heterocephalus_glaber_male
ENSOGAG00000012884	A1CF	100	70.752	ENSHCOG00000017669	a1cf	100	73.083	Hippocampus_comes
ENSOGAG00000012884	A1CF	90	82.463	ENSIPUG00000010367	a1cf	95	82.075	Ictalurus_punctatus
ENSOGAG00000012884	A1CF	100	76.423	ENSKMAG00000006568	a1cf	100	76.260	Kryptolebias_marmoratus
ENSOGAG00000012884	A1CF	99	76.606	ENSLBEG00000020994	a1cf	98	76.112	Labrus_bergylta
ENSOGAG00000012884	A1CF	100	81.208	ENSLACG00000008061	A1CF	100	80.872	Latimeria_chalumnae
ENSOGAG00000012884	A1CF	100	80.905	ENSLOCG00000006302	a1cf	100	80.737	Lepisosteus_oculatus
ENSOGAG00000012884	A1CF	100	93.277	ENSLAFG00000015462	A1CF	100	93.277	Loxodonta_africana
ENSOGAG00000012884	A1CF	100	94.764	ENSMFAG00000035948	A1CF	100	94.764	Macaca_fascicularis
ENSOGAG00000012884	A1CF	100	94.764	ENSMMUG00000007077	A1CF	100	94.764	Macaca_mulatta
ENSOGAG00000012884	A1CF	100	94.595	ENSMNEG00000031454	A1CF	100	94.595	Macaca_nemestrina
ENSOGAG00000012884	A1CF	100	96.115	ENSMLEG00000037223	A1CF	100	96.115	Mandrillus_leucophaeus
ENSOGAG00000012884	A1CF	100	74.632	ENSMAMG00000010402	a1cf	100	74.673	Mastacembelus_armatus
ENSOGAG00000012884	A1CF	100	76.756	ENSMZEG00005013245	a1cf	100	75.879	Maylandia_zebra
ENSOGAG00000012884	A1CF	100	87.710	ENSMGAG00000001507	A1CF	100	87.374	Meleagris_gallopavo
ENSOGAG00000012884	A1CF	100	91.933	ENSMAUG00000007422	A1cf	100	91.933	Mesocricetus_auratus
ENSOGAG00000012884	A1CF	100	92.809	ENSMICG00000003377	A1CF	100	92.809	Microcebus_murinus
ENSOGAG00000012884	A1CF	100	92.605	ENSMOCG00000021536	A1cf	100	92.101	Microtus_ochrogaster
ENSOGAG00000012884	A1CF	100	67.652	ENSMMOG00000009422	a1cf	100	67.928	Mola_mola
ENSOGAG00000012884	A1CF	92	89.725	ENSMODG00000016478	A1CF	96	90.684	Monodelphis_domestica
ENSOGAG00000012884	A1CF	100	72.362	ENSMALG00000012992	a1cf	100	71.524	Monopterus_albus
ENSOGAG00000012884	A1CF	100	91.765	MGP_CAROLIEiJ_G0022873	A1cf	100	91.429	Mus_caroli
ENSOGAG00000012884	A1CF	100	91.765	ENSMUSG00000052595	A1cf	99	95.263	Mus_musculus
ENSOGAG00000012884	A1CF	100	91.597	MGP_PahariEiJ_G0014366	A1cf	100	90.588	Mus_pahari
ENSOGAG00000012884	A1CF	100	91.429	MGP_SPRETEiJ_G0023792	A1cf	100	91.092	Mus_spretus
ENSOGAG00000012884	A1CF	100	88.514	ENSMPUG00000016971	A1CF	100	88.514	Mustela_putorius_furo
ENSOGAG00000012884	A1CF	100	92.773	ENSMLUG00000016071	A1CF	100	92.437	Myotis_lucifugus
ENSOGAG00000012884	A1CF	100	92.773	ENSNGAG00000015136	A1cf	100	92.437	Nannospalax_galili
ENSOGAG00000012884	A1CF	100	74.062	ENSNBRG00000001712	a1cf	100	75.041	Neolamprologus_brichardi
ENSOGAG00000012884	A1CF	100	96.303	ENSNLEG00000012028	A1CF	100	96.303	Nomascus_leucogenys
ENSOGAG00000012884	A1CF	94	89.286	ENSMEUG00000015909	A1CF	100	88.929	Notamacropus_eugenii
ENSOGAG00000012884	A1CF	89	84.000	ENSOPRG00000010667	A1CF	96	84.000	Ochotona_princeps
ENSOGAG00000012884	A1CF	100	75.204	ENSONIG00000019105	a1cf	100	75.041	Oreochromis_niloticus
ENSOGAG00000012884	A1CF	78	88.009	ENSOANG00000007360	A1CF	99	88.009	Ornithorhynchus_anatinus
ENSOGAG00000012884	A1CF	100	91.779	ENSOCUG00000011587	A1CF	100	91.946	Oryctolagus_cuniculus
ENSOGAG00000012884	A1CF	100	73.650	ENSORLG00000013342	a1cf	100	73.071	Oryzias_latipes
ENSOGAG00000012884	A1CF	100	75.286	ENSORLG00020000586	a1cf	100	74.304	Oryzias_latipes_hni
ENSOGAG00000012884	A1CF	100	75.450	ENSORLG00015018569	a1cf	100	74.468	Oryzias_latipes_hsok
ENSOGAG00000012884	A1CF	100	74.959	ENSOMEG00000013531	a1cf	100	73.650	Oryzias_melastigma
ENSOGAG00000012884	A1CF	100	93.445	ENSOARG00000013695	A1CF	100	93.277	Ovis_aries
ENSOGAG00000012884	A1CF	97	93.403	ENSPPAG00000028115	A1CF	100	97.166	Pan_paniscus
ENSOGAG00000012884	A1CF	100	93.243	ENSPPRG00000012180	A1CF	100	93.243	Panthera_pardus
ENSOGAG00000012884	A1CF	100	93.243	ENSPTIG00000021223	A1CF	100	93.243	Panthera_tigris_altaica
ENSOGAG00000012884	A1CF	100	95.286	ENSPTRG00000002508	A1CF	100	94.949	Pan_troglodytes
ENSOGAG00000012884	A1CF	100	94.764	ENSPANG00000021988	A1CF	100	94.764	Papio_anubis
ENSOGAG00000012884	A1CF	100	80.268	ENSPKIG00000025176	a1cf	100	79.264	Paramormyrops_kingsleyae
ENSOGAG00000012884	A1CF	100	87.184	ENSPSIG00000010318	A1CF	100	86.847	Pelodiscus_sinensis
ENSOGAG00000012884	A1CF	89	70.476	ENSPMGG00000013359	a1cf	99	67.238	Periophthalmus_magnuspinnatus
ENSOGAG00000012884	A1CF	100	93.109	ENSPEMG00000015021	A1cf	100	92.437	Peromyscus_maniculatus_bairdii
ENSOGAG00000012884	A1CF	100	88.870	ENSPCIG00000002175	A1CF	100	88.533	Phascolarctos_cinereus
ENSOGAG00000012884	A1CF	100	76.059	ENSPFOG00000006683	a1cf	100	76.710	Poecilia_formosa
ENSOGAG00000012884	A1CF	100	76.059	ENSPFOG00000007437	-	100	76.710	Poecilia_formosa
ENSOGAG00000012884	A1CF	100	74.919	ENSPLAG00000001210	-	100	75.570	Poecilia_latipinna
ENSOGAG00000012884	A1CF	100	74.919	ENSPLAG00000000026	a1cf	100	75.570	Poecilia_latipinna
ENSOGAG00000012884	A1CF	100	68.137	ENSPMEG00000015529	-	100	68.791	Poecilia_mexicana
ENSOGAG00000012884	A1CF	100	66.993	ENSPMEG00000000921	a1cf	100	67.647	Poecilia_mexicana
ENSOGAG00000012884	A1CF	100	75.733	ENSPREG00000016298	a1cf	100	76.384	Poecilia_reticulata
ENSOGAG00000012884	A1CF	100	94.454	ENSPPYG00000002819	A1CF	100	94.118	Pongo_abelii
ENSOGAG00000012884	A1CF	79	71.186	ENSPCAG00000006463	A1CF	70	79.839	Procavia_capensis
ENSOGAG00000012884	A1CF	100	96.141	ENSPCOG00000024172	A1CF	100	96.141	Propithecus_coquereli
ENSOGAG00000012884	A1CF	100	75.367	ENSPNYG00000017944	a1cf	100	76.346	Pundamilia_nyererei
ENSOGAG00000012884	A1CF	100	79.305	ENSPNAG00000007704	a1cf	100	77.980	Pygocentrus_nattereri
ENSOGAG00000012884	A1CF	100	90.420	ENSRNOG00000033195	A1cf	100	90.084	Rattus_norvegicus
ENSOGAG00000012884	A1CF	100	89.394	ENSRBIG00000042892	A1CF	100	92.717	Rhinopithecus_bieti
ENSOGAG00000012884	A1CF	100	96.115	ENSRROG00000041398	A1CF	100	96.115	Rhinopithecus_roxellana
ENSOGAG00000012884	A1CF	100	95.798	ENSSBOG00000021930	A1CF	100	95.294	Saimiri_boliviensis_boliviensis
ENSOGAG00000012884	A1CF	100	90.051	ENSSHAG00000005096	A1CF	100	90.051	Sarcophilus_harrisii
ENSOGAG00000012884	A1CF	100	78.109	ENSSFOG00015011774	a1cf	100	77.114	Scleropages_formosus
ENSOGAG00000012884	A1CF	100	75.244	ENSSMAG00000013271	a1cf	100	74.593	Scophthalmus_maximus
ENSOGAG00000012884	A1CF	100	77.280	ENSSDUG00000013930	a1cf	100	76.285	Seriola_dumerili
ENSOGAG00000012884	A1CF	100	70.297	ENSSLDG00000004290	a1cf	100	69.802	Seriola_lalandi_dorsalis
ENSOGAG00000012884	A1CF	95	82.155	ENSSARG00000005940	A1CF	96	81.802	Sorex_araneus
ENSOGAG00000012884	A1CF	95	86.749	ENSSPUG00000006797	A1CF	95	86.042	Sphenodon_punctatus
ENSOGAG00000012884	A1CF	100	93.613	ENSSSCG00000010431	A1CF	100	93.445	Sus_scrofa
ENSOGAG00000012884	A1CF	100	86.455	ENSTGUG00000005090	A1CF	100	86.455	Taeniopygia_guttata
ENSOGAG00000012884	A1CF	100	74.715	ENSTRUG00000001982	a1cf	100	74.551	Takifugu_rubripes
ENSOGAG00000012884	A1CF	100	75.122	ENSTNIG00000003580	a1cf	100	74.634	Tetraodon_nigroviridis
ENSOGAG00000012884	A1CF	97	85.442	ENSTTRG00000013190	A1CF	95	85.269	Tursiops_truncatus
ENSOGAG00000012884	A1CF	100	93.412	ENSUAMG00000020065	A1CF	100	93.412	Ursus_americanus
ENSOGAG00000012884	A1CF	100	94.088	ENSUMAG00000011162	A1CF	100	93.581	Ursus_maritimus
ENSOGAG00000012884	A1CF	87	87.908	ENSVPAG00000006130	A1CF	86	87.908	Vicugna_pacos
ENSOGAG00000012884	A1CF	100	92.230	ENSVVUG00000002504	A1CF	100	92.061	Vulpes_vulpes
ENSOGAG00000012884	A1CF	100	78.727	ENSXETG00000006611	a1cf	100	78.559	Xenopus_tropicalis
ENSOGAG00000012884	A1CF	100	75.738	ENSXCOG00000003302	a1cf	100	75.902	Xiphophorus_couchianus
ENSOGAG00000012884	A1CF	100	76.885	ENSXMAG00000016703	a1cf	100	77.049	Xiphophorus_maculatus