EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000012931 (Gene tree)
Gene ID: 100953039
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 23818 bases
Position: chrGL873557.1:5344183-5368000
Accession: 100953039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000011593	PRP21_like_P	PF12230.8	9.1e-52	1	1
ENSOGAP00000011593	Surp	PF01805.20	4.6e-46	1	2
ENSOGAP00000011593	Surp	PF01805.20	4.6e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000012937	SF3A1-201	2795	-	ENSOGAP00000011593	793 (aa)	XP_003789920	H0X818

Gene Model

Click here to download ENSOGAG00000012931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000012931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000012931	SF3A1	100	99.117	ENSG00000099995	SF3A1	100	99.117	Homo_sapiens
ENSOGAG00000012931	SF3A1	100	83.396	ENSAPOG00000020465	sf3a1	99	85.290	Acanthochromis_polyacanthus
ENSOGAG00000012931	SF3A1	100	98.616	ENSAMEG00000007737	SF3A1	100	98.616	Ailuropoda_melanoleuca
ENSOGAG00000012931	SF3A1	100	84.528	ENSACIG00000020672	sf3a1	98	85.938	Amphilophus_citrinellus
ENSOGAG00000012931	SF3A1	100	83.125	ENSAOCG00000003060	sf3a1	99	85.548	Amphiprion_ocellaris
ENSOGAG00000012931	SF3A1	100	83.250	ENSAPEG00000010735	sf3a1	99	85.677	Amphiprion_percula
ENSOGAG00000012931	SF3A1	96	85.938	ENSATEG00000021201	sf3a1	98	85.419	Anabas_testudineus
ENSOGAG00000012931	SF3A1	95	94.055	ENSAPLG00000009057	SF3A1	99	93.161	Anas_platyrhynchos
ENSOGAG00000012931	SF3A1	100	85.468	ENSACAG00000009415	SF3A1	100	86.700	Anolis_carolinensis
ENSOGAG00000012931	SF3A1	100	98.865	ENSANAG00000032045	SF3A1	100	98.865	Aotus_nancymaae
ENSOGAG00000012931	SF3A1	100	84.355	ENSACLG00000012622	sf3a1	99	85.917	Astatotilapia_calliptera
ENSOGAG00000012931	SF3A1	99	83.439	ENSAMXG00000005382	sf3a1	98	84.994	Astyanax_mexicanus
ENSOGAG00000012931	SF3A1	100	98.865	ENSBTAG00000003390	SF3A1	100	98.865	Bos_taurus
ENSOGAG00000012931	SF3A1	84	43.627	WBGene00004188	prp-21	94	43.682	Caenorhabditis_elegans
ENSOGAG00000012931	SF3A1	100	98.739	ENSCJAG00000010370	SF3A1	100	98.739	Callithrix_jacchus
ENSOGAG00000012931	SF3A1	100	98.865	ENSCAFG00000012559	SF3A1	100	98.865	Canis_familiaris
ENSOGAG00000012931	SF3A1	100	98.865	ENSCAFG00020000838	SF3A1	100	98.865	Canis_lupus_dingo
ENSOGAG00000012931	SF3A1	100	98.739	ENSCHIG00000018642	SF3A1	100	98.739	Capra_hircus
ENSOGAG00000012931	SF3A1	100	99.369	ENSTSYG00000004739	SF3A1	100	99.369	Carlito_syrichta
ENSOGAG00000012931	SF3A1	94	81.175	ENSCAPG00000015414	SF3A1	98	81.175	Cavia_aperea
ENSOGAG00000012931	SF3A1	100	98.613	ENSCPOG00000014589	SF3A1	100	98.613	Cavia_porcellus
ENSOGAG00000012931	SF3A1	100	98.865	ENSCCAG00000032006	SF3A1	100	98.865	Cebus_capucinus
ENSOGAG00000012931	SF3A1	100	99.369	ENSCATG00000029241	SF3A1	100	99.369	Cercocebus_atys
ENSOGAG00000012931	SF3A1	100	98.613	ENSCLAG00000006508	SF3A1	100	98.613	Chinchilla_lanigera
ENSOGAG00000012931	SF3A1	100	99.243	ENSCSAG00000009470	SF3A1	100	99.243	Chlorocebus_sabaeus
ENSOGAG00000012931	SF3A1	61	99.083	ENSCHOG00000005201	SF3A1	69	99.083	Choloepus_hoffmanni
ENSOGAG00000012931	SF3A1	100	90.680	ENSCPBG00000007595	SF3A1	100	90.806	Chrysemys_picta_bellii
ENSOGAG00000012931	SF3A1	94	52.513	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSOGAG00000012931	SF3A1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSOGAG00000012931	SF3A1	100	99.243	ENSCANG00000033564	SF3A1	100	99.243	Colobus_angolensis_palliatus
ENSOGAG00000012931	SF3A1	100	98.361	ENSCGRG00001008933	Sf3a1	100	98.361	Cricetulus_griseus_chok1gshd
ENSOGAG00000012931	SF3A1	100	98.361	ENSCGRG00000006127	Sf3a1	100	98.361	Cricetulus_griseus_crigri
ENSOGAG00000012931	SF3A1	99	81.853	ENSCSEG00000010792	sf3a1	98	82.965	Cynoglossus_semilaevis
ENSOGAG00000012931	SF3A1	100	83.145	ENSCVAG00000004560	sf3a1	98	84.375	Cyprinodon_variegatus
ENSOGAG00000012931	SF3A1	100	82.538	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSOGAG00000012931	SF3A1	100	98.616	ENSDNOG00000010629	SF3A1	100	98.616	Dasypus_novemcinctus
ENSOGAG00000012931	SF3A1	100	98.991	ENSDORG00000005613	Sf3a1	100	98.991	Dipodomys_ordii
ENSOGAG00000012931	SF3A1	79	61.495	FBgn0266917	Sf3a1	85	59.099	Drosophila_melanogaster
ENSOGAG00000012931	SF3A1	84	96.707	ENSETEG00000017194	SF3A1	100	94.587	Echinops_telfairi
ENSOGAG00000012931	SF3A1	100	65.059	ENSEBUG00000001285	sf3a1	96	66.914	Eptatretus_burgeri
ENSOGAG00000012931	SF3A1	100	98.991	ENSEASG00005010254	SF3A1	100	98.991	Equus_asinus_asinus
ENSOGAG00000012931	SF3A1	100	98.991	ENSECAG00000023962	SF3A1	100	98.991	Equus_caballus
ENSOGAG00000012931	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSOGAG00000012931	SF3A1	100	82.080	ENSELUG00000022578	sf3a1	97	83.203	Esox_lucius
ENSOGAG00000012931	SF3A1	100	98.613	ENSFCAG00000011932	SF3A1	100	98.613	Felis_catus
ENSOGAG00000012931	SF3A1	95	93.122	ENSFALG00000006944	SF3A1	100	91.688	Ficedula_albicollis
ENSOGAG00000012931	SF3A1	100	98.991	ENSFDAG00000009560	SF3A1	100	98.991	Fukomys_damarensis
ENSOGAG00000012931	SF3A1	100	84.025	ENSFHEG00000010866	sf3a1	98	85.286	Fundulus_heteroclitus
ENSOGAG00000012931	SF3A1	100	81.234	ENSGMOG00000016024	sf3a1	97	81.323	Gadus_morhua
ENSOGAG00000012931	SF3A1	95	94.048	ENSGALG00000007937	SF3A1	100	92.191	Gallus_gallus
ENSOGAG00000012931	SF3A1	100	83.270	ENSGAFG00000009111	sf3a1	97	84.967	Gambusia_affinis
ENSOGAG00000012931	SF3A1	100	82.494	ENSGACG00000011893	sf3a1	97	83.639	Gasterosteus_aculeatus
ENSOGAG00000012931	SF3A1	96	90.933	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSOGAG00000012931	SF3A1	100	99.117	ENSGGOG00000012631	SF3A1	100	99.117	Gorilla_gorilla
ENSOGAG00000012931	SF3A1	100	84.355	ENSHBUG00000015795	sf3a1	99	85.917	Haplochromis_burtoni
ENSOGAG00000012931	SF3A1	100	98.865	ENSHGLG00000007907	SF3A1	100	98.865	Heterocephalus_glaber_female
ENSOGAG00000012931	SF3A1	100	98.865	ENSHGLG00100013799	SF3A1	100	98.865	Heterocephalus_glaber_male
ENSOGAG00000012931	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.774	Hippocampus_comes
ENSOGAG00000012931	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSOGAG00000012931	SF3A1	100	98.865	ENSSTOG00000013892	SF3A1	100	98.865	Ictidomys_tridecemlineatus
ENSOGAG00000012931	SF3A1	100	98.741	ENSJJAG00000022566	Sf3a1	100	98.741	Jaculus_jaculus
ENSOGAG00000012931	SF3A1	100	82.642	ENSKMAG00000002400	sf3a1	98	84.635	Kryptolebias_marmoratus
ENSOGAG00000012931	SF3A1	100	82.893	ENSLBEG00000022974	sf3a1	99	83.484	Labrus_bergylta
ENSOGAG00000012931	SF3A1	100	86.700	ENSLACG00000003565	SF3A1	97	88.021	Latimeria_chalumnae
ENSOGAG00000012931	SF3A1	100	85.213	ENSLOCG00000008251	sf3a1	97	87.013	Lepisosteus_oculatus
ENSOGAG00000012931	SF3A1	98	62.548	ENSLAFG00000026032	-	97	62.596	Loxodonta_africana
ENSOGAG00000012931	SF3A1	100	98.865	ENSLAFG00000000448	SF3A1	100	98.865	Loxodonta_africana
ENSOGAG00000012931	SF3A1	100	99.117	ENSMFAG00000031979	SF3A1	100	99.117	Macaca_fascicularis
ENSOGAG00000012931	SF3A1	100	99.117	ENSMMUG00000005547	SF3A1	100	99.117	Macaca_mulatta
ENSOGAG00000012931	SF3A1	100	98.991	ENSMNEG00000037229	SF3A1	100	98.991	Macaca_nemestrina
ENSOGAG00000012931	SF3A1	100	99.243	ENSMLEG00000041908	SF3A1	100	99.243	Mandrillus_leucophaeus
ENSOGAG00000012931	SF3A1	97	85.899	ENSMAMG00000006460	sf3a1	97	86.028	Mastacembelus_armatus
ENSOGAG00000012931	SF3A1	100	84.355	ENSMZEG00005009633	sf3a1	99	85.917	Maylandia_zebra
ENSOGAG00000012931	SF3A1	95	94.048	ENSMGAG00000001330	SF3A1	99	93.152	Meleagris_gallopavo
ENSOGAG00000012931	SF3A1	92	94.809	ENSMAUG00000020317	Sf3a1	94	94.809	Mesocricetus_auratus
ENSOGAG00000012931	SF3A1	100	99.243	ENSMICG00000010038	SF3A1	100	99.243	Microcebus_murinus
ENSOGAG00000012931	SF3A1	100	98.235	ENSMOCG00000008438	Sf3a1	100	98.235	Microtus_ochrogaster
ENSOGAG00000012931	SF3A1	100	81.635	ENSMMOG00000015588	sf3a1	97	82.682	Mola_mola
ENSOGAG00000012931	SF3A1	100	97.478	ENSMODG00000009270	SF3A1	100	97.478	Monodelphis_domestica
ENSOGAG00000012931	SF3A1	100	83.899	ENSMALG00000000148	sf3a1	99	85.831	Monopterus_albus
ENSOGAG00000012931	SF3A1	100	97.982	MGP_CAROLIEiJ_G0016029	Sf3a1	100	97.982	Mus_caroli
ENSOGAG00000012931	SF3A1	100	97.982	ENSMUSG00000002129	Sf3a1	100	97.982	Mus_musculus
ENSOGAG00000012931	SF3A1	100	97.730	MGP_PahariEiJ_G0016862	Sf3a1	100	97.730	Mus_pahari
ENSOGAG00000012931	SF3A1	100	97.982	MGP_SPRETEiJ_G0016870	Sf3a1	100	97.982	Mus_spretus
ENSOGAG00000012931	SF3A1	100	98.865	ENSMPUG00000013144	SF3A1	100	98.865	Mustela_putorius_furo
ENSOGAG00000012931	SF3A1	100	98.739	ENSMLUG00000002139	SF3A1	100	98.739	Myotis_lucifugus
ENSOGAG00000012931	SF3A1	100	98.487	ENSNGAG00000016977	Sf3a1	100	98.487	Nannospalax_galili
ENSOGAG00000012931	SF3A1	100	83.770	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSOGAG00000012931	SF3A1	100	99.243	ENSNLEG00000003686	SF3A1	100	99.243	Nomascus_leucogenys
ENSOGAG00000012931	SF3A1	96	87.763	ENSMEUG00000008741	SF3A1	100	87.763	Notamacropus_eugenii
ENSOGAG00000012931	SF3A1	100	98.361	ENSOPRG00000016636	SF3A1	100	98.361	Ochotona_princeps
ENSOGAG00000012931	SF3A1	100	98.739	ENSODEG00000002571	SF3A1	100	98.739	Octodon_degus
ENSOGAG00000012931	SF3A1	100	84.625	ENSONIG00000010848	sf3a1	99	85.548	Oreochromis_niloticus
ENSOGAG00000012931	SF3A1	100	99.117	ENSOCUG00000007633	SF3A1	100	99.117	Oryctolagus_cuniculus
ENSOGAG00000012931	SF3A1	96	81.890	ENSORLG00000013050	sf3a1	98	83.693	Oryzias_latipes
ENSOGAG00000012931	SF3A1	99	80.633	ENSORLG00020003236	sf3a1	94	84.097	Oryzias_latipes_hni
ENSOGAG00000012931	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSOGAG00000012931	SF3A1	100	83.019	ENSOMEG00000013362	sf3a1	99	83.871	Oryzias_melastigma
ENSOGAG00000012931	SF3A1	100	96.974	ENSOARG00000006849	SF3A1	100	96.974	Ovis_aries
ENSOGAG00000012931	SF3A1	100	98.108	ENSPPAG00000041790	SF3A1	100	98.108	Pan_paniscus
ENSOGAG00000012931	SF3A1	100	98.613	ENSPPRG00000004391	SF3A1	100	98.613	Panthera_pardus
ENSOGAG00000012931	SF3A1	97	98.834	ENSPTIG00000000844	SF3A1	100	98.834	Panthera_tigris_altaica
ENSOGAG00000012931	SF3A1	100	99.117	ENSPTRG00000014240	SF3A1	100	99.117	Pan_troglodytes
ENSOGAG00000012931	SF3A1	100	99.243	ENSPANG00000020772	SF3A1	100	99.243	Papio_anubis
ENSOGAG00000012931	SF3A1	83	93.407	ENSPSIG00000012803	SF3A1	96	93.785	Pelodiscus_sinensis
ENSOGAG00000012931	SF3A1	96	84.162	ENSPMGG00000023096	sf3a1	100	83.901	Periophthalmus_magnuspinnatus
ENSOGAG00000012931	SF3A1	100	98.361	ENSPEMG00000009494	Sf3a1	100	98.361	Peromyscus_maniculatus_bairdii
ENSOGAG00000012931	SF3A1	69	78.040	ENSPMAG00000007139	-	90	79.065	Petromyzon_marinus
ENSOGAG00000012931	SF3A1	100	97.352	ENSPCIG00000022692	SF3A1	100	97.352	Phascolarctos_cinereus
ENSOGAG00000012931	SF3A1	100	75.377	ENSPFOG00000016768	sf3a1	93	79.048	Poecilia_formosa
ENSOGAG00000012931	SF3A1	100	83.668	ENSPLAG00000017268	sf3a1	97	85.229	Poecilia_latipinna
ENSOGAG00000012931	SF3A1	84	86.145	ENSPMEG00000019811	sf3a1	98	85.392	Poecilia_mexicana
ENSOGAG00000012931	SF3A1	100	83.794	ENSPREG00000010347	sf3a1	97	85.621	Poecilia_reticulata
ENSOGAG00000012931	SF3A1	100	99.243	ENSPPYG00000011707	SF3A1	100	99.243	Pongo_abelii
ENSOGAG00000012931	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSOGAG00000012931	SF3A1	100	98.991	ENSPCOG00000026630	SF3A1	100	98.991	Propithecus_coquereli
ENSOGAG00000012931	SF3A1	100	94.325	ENSPVAG00000017719	SF3A1	94	97.987	Pteropus_vampyrus
ENSOGAG00000012931	SF3A1	100	84.355	ENSPNYG00000018706	sf3a1	99	85.917	Pundamilia_nyererei
ENSOGAG00000012931	SF3A1	97	83.569	ENSPNAG00000003721	sf3a1	99	84.339	Pygocentrus_nattereri
ENSOGAG00000012931	SF3A1	100	98.108	ENSRNOG00000005218	Sf3a1	100	98.108	Rattus_norvegicus
ENSOGAG00000012931	SF3A1	100	99.117	ENSRBIG00000032167	SF3A1	100	99.117	Rhinopithecus_bieti
ENSOGAG00000012931	SF3A1	100	99.117	ENSRROG00000044908	SF3A1	100	99.117	Rhinopithecus_roxellana
ENSOGAG00000012931	SF3A1	97	95.090	ENSSBOG00000021960	SF3A1	100	99.261	Saimiri_boliviensis_boliviensis
ENSOGAG00000012931	SF3A1	97	94.955	ENSSHAG00000003666	SF3A1	98	95.084	Sarcophilus_harrisii
ENSOGAG00000012931	SF3A1	100	83.500	ENSSFOG00015004579	sf3a1	99	85.256	Scleropages_formosus
ENSOGAG00000012931	SF3A1	100	81.887	ENSSMAG00000004275	sf3a1	97	83.137	Scophthalmus_maximus
ENSOGAG00000012931	SF3A1	100	83.899	ENSSDUG00000022219	sf3a1	99	85.419	Seriola_dumerili
ENSOGAG00000012931	SF3A1	100	83.899	ENSSLDG00000012642	sf3a1	99	85.419	Seriola_lalandi_dorsalis
ENSOGAG00000012931	SF3A1	97	95.337	ENSSARG00000005960	SF3A1	100	95.337	Sorex_araneus
ENSOGAG00000012931	SF3A1	96	91.969	ENSSPUG00000018863	SF3A1	100	91.542	Sphenodon_punctatus
ENSOGAG00000012931	SF3A1	100	84.654	ENSSPAG00000011856	sf3a1	99	85.290	Stegastes_partitus
ENSOGAG00000012931	SF3A1	100	98.739	ENSSSCG00000010002	SF3A1	100	98.739	Sus_scrofa
ENSOGAG00000012931	SF3A1	95	93.931	ENSTGUG00000010547	SF3A1	99	93.385	Taeniopygia_guttata
ENSOGAG00000012931	SF3A1	100	81.384	ENSTRUG00000006118	sf3a1	97	82.353	Takifugu_rubripes
ENSOGAG00000012931	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	85.714	Tetraodon_nigroviridis
ENSOGAG00000012931	SF3A1	100	91.299	ENSTBEG00000012771	SF3A1	100	91.299	Tupaia_belangeri
ENSOGAG00000012931	SF3A1	100	98.741	ENSTTRG00000001535	SF3A1	100	98.741	Tursiops_truncatus
ENSOGAG00000012931	SF3A1	99	97.586	ENSUAMG00000006750	SF3A1	99	97.586	Ursus_americanus
ENSOGAG00000012931	SF3A1	99	98.087	ENSUMAG00000016665	SF3A1	99	98.087	Ursus_maritimus
ENSOGAG00000012931	SF3A1	100	98.865	ENSVVUG00000003075	SF3A1	100	98.865	Vulpes_vulpes
ENSOGAG00000012931	SF3A1	100	85.822	ENSXETG00000016144	sf3a1	100	85.445	Xenopus_tropicalis
ENSOGAG00000012931	SF3A1	100	83.019	ENSXCOG00000015653	sf3a1	97	84.706	Xiphophorus_couchianus
ENSOGAG00000012931	SF3A1	100	83.145	ENSXMAG00000002753	sf3a1	97	84.837	Xiphophorus_maculatus