EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000013245 (Gene tree)
Gene ID: 100947437
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 24027 bases
Position: chrGL873848.1:203447-227473
Accession: 100947437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000011870	CSD	PF00313.22	8.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000013250	YBX3-201	1876	XM_012813892	ENSOGAP00000011870	377 (aa)	XP_012669346	H0X8N9

Gene Model

Click here to download ENSOGAG00000013245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000013245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000013245	YBX3	89	47.262	ENSOGAG00000014939	-	87	48.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000013245	YBX3	100	89.710	ENSG00000060138	YBX3	100	89.974	Homo_sapiens
ENSOGAG00000013245	YBX3	96	87.052	ENSAMEG00000009393	YBX3	95	90.725	Ailuropoda_melanoleuca
ENSOGAG00000013245	YBX3	77	67.808	ENSAPLG00000003147	YBX3	100	67.808	Anas_platyrhynchos
ENSOGAG00000013245	YBX3	86	90.184	ENSANAG00000024492	-	100	89.446	Aotus_nancymaae
ENSOGAG00000013245	YBX3	100	82.143	ENSBTAG00000009663	YBX3	100	79.337	Bos_taurus
ENSOGAG00000013245	YBX3	82	87.342	ENSCJAG00000033824	-	100	86.301	Callithrix_jacchus
ENSOGAG00000013245	YBX3	100	88.391	ENSCJAG00000021660	-	100	88.654	Callithrix_jacchus
ENSOGAG00000013245	YBX3	78	93.197	ENSCAFG00000013401	YBX3	97	98.000	Canis_familiaris
ENSOGAG00000013245	YBX3	100	89.211	ENSCAFG00020006412	YBX3	100	88.684	Canis_lupus_dingo
ENSOGAG00000013245	YBX3	100	82.398	ENSCHIG00000010863	YBX3	100	83.820	Capra_hircus
ENSOGAG00000013245	YBX3	78	91.156	ENSTSYG00000004204	-	82	98.000	Carlito_syrichta
ENSOGAG00000013245	YBX3	100	54.642	ENSTSYG00000035821	-	97	75.893	Carlito_syrichta
ENSOGAG00000013245	YBX3	78	87.713	ENSCAPG00000015039	YBX3	93	87.713	Cavia_aperea
ENSOGAG00000013245	YBX3	80	88.667	ENSCPOG00000011329	YBX3	88	96.850	Cavia_porcellus
ENSOGAG00000013245	YBX3	100	88.918	ENSCCAG00000016469	YBX3	100	89.182	Cebus_capucinus
ENSOGAG00000013245	YBX3	100	89.211	ENSCATG00000034411	YBX3	100	89.474	Cercocebus_atys
ENSOGAG00000013245	YBX3	78	88.396	ENSCLAG00000016030	YBX3	94	88.396	Chinchilla_lanigera
ENSOGAG00000013245	YBX3	100	89.211	ENSCSAG00000008744	YBX3	100	89.474	Chlorocebus_sabaeus
ENSOGAG00000013245	YBX3	78	81.522	ENSCHOG00000011988	YBX3	56	92.000	Choloepus_hoffmanni
ENSOGAG00000013245	YBX3	79	78.114	ENSCPBG00000014147	YBX3	77	91.150	Chrysemys_picta_bellii
ENSOGAG00000013245	YBX3	80	90.728	ENSCANG00000036801	YBX3	89	98.165	Colobus_angolensis_palliatus
ENSOGAG00000013245	YBX3	86	89.783	ENSCGRG00001016148	Ybx3	100	85.411	Cricetulus_griseus_chok1gshd
ENSOGAG00000013245	YBX3	78	90.236	ENSCGRG00000004563	Ybx3	98	90.236	Cricetulus_griseus_crigri
ENSOGAG00000013245	YBX3	90	82.609	ENSDORG00000009103	Ybx3	81	91.126	Dipodomys_ordii
ENSOGAG00000013245	YBX3	77	84.300	ENSETEG00000002557	YBX3	99	82.474	Echinops_telfairi
ENSOGAG00000013245	YBX3	100	86.472	ENSEASG00005014726	YBX3	100	86.472	Equus_asinus_asinus
ENSOGAG00000013245	YBX3	100	89.390	ENSECAG00000013777	YBX3	100	89.390	Equus_caballus
ENSOGAG00000013245	YBX3	77	87.285	ENSEEUG00000010415	YBX3	100	87.629	Erinaceus_europaeus
ENSOGAG00000013245	YBX3	100	90.526	ENSFCAG00000027748	YBX3	100	90.789	Felis_catus
ENSOGAG00000013245	YBX3	77	65.870	ENSFALG00000003661	YBX3	100	63.140	Ficedula_albicollis
ENSOGAG00000013245	YBX3	78	84.983	ENSFDAG00000021192	YBX3	92	84.983	Fukomys_damarensis
ENSOGAG00000013245	YBX3	100	53.927	ENSGALG00000031890	YBX3	82	88.281	Gallus_gallus
ENSOGAG00000013245	YBX3	79	77.441	ENSGAGG00000017780	YBX3	83	85.271	Gopherus_agassizii
ENSOGAG00000013245	YBX3	100	89.474	ENSGGOG00000001352	YBX3	100	89.737	Gorilla_gorilla
ENSOGAG00000013245	YBX3	82	76.038	ENSHGLG00000014798	-	89	77.124	Heterocephalus_glaber_female
ENSOGAG00000013245	YBX3	74	79.715	ENSHGLG00000015495	-	87	76.667	Heterocephalus_glaber_female
ENSOGAG00000013245	YBX3	62	90.164	ENSHGLG00100003589	YBX3	84	97.000	Heterocephalus_glaber_male
ENSOGAG00000013245	YBX3	78	84.983	ENSSTOG00000002108	-	88	84.983	Ictidomys_tridecemlineatus
ENSOGAG00000013245	YBX3	93	84.615	ENSSTOG00000032577	-	100	79.841	Ictidomys_tridecemlineatus
ENSOGAG00000013245	YBX3	80	68.977	ENSJJAG00000014239	Ybx3	98	84.946	Jaculus_jaculus
ENSOGAG00000013245	YBX3	100	91.247	ENSLAFG00000017247	YBX3	100	91.247	Loxodonta_africana
ENSOGAG00000013245	YBX3	100	89.182	ENSMFAG00000039369	YBX3	100	89.446	Macaca_fascicularis
ENSOGAG00000013245	YBX3	88	88.855	ENSMMUG00000022469	YBX3	98	89.846	Macaca_mulatta
ENSOGAG00000013245	YBX3	100	88.918	ENSMNEG00000045109	YBX3	100	89.182	Macaca_nemestrina
ENSOGAG00000013245	YBX3	94	82.073	ENSMLEG00000033618	YBX3	81	92.833	Mandrillus_leucophaeus
ENSOGAG00000013245	YBX3	77	66.096	ENSMGAG00000014224	YBX3	98	97.980	Meleagris_gallopavo
ENSOGAG00000013245	YBX3	88	89.157	ENSMAUG00000012185	Ybx3	88	97.345	Mesocricetus_auratus
ENSOGAG00000013245	YBX3	84	85.484	ENSMICG00000031459	-	99	85.484	Microcebus_murinus
ENSOGAG00000013245	YBX3	100	94.695	ENSMICG00000038002	-	100	94.695	Microcebus_murinus
ENSOGAG00000013245	YBX3	82	91.586	ENSMOCG00000016291	Ybx3	94	98.230	Microtus_ochrogaster
ENSOGAG00000013245	YBX3	78	82.653	ENSMODG00000018248	YBX3	91	82.653	Monodelphis_domestica
ENSOGAG00000013245	YBX3	86	90.093	MGP_CAROLIEiJ_G0028947	Ybx3	100	85.411	Mus_caroli
ENSOGAG00000013245	YBX3	86	90.093	ENSMUSG00000030189	Ybx3	100	85.411	Mus_musculus
ENSOGAG00000013245	YBX3	86	90.093	MGP_PahariEiJ_G0022709	Ybx3	100	85.411	Mus_pahari
ENSOGAG00000013245	YBX3	86	90.402	MGP_SPRETEiJ_G0029994	Ybx3	100	85.676	Mus_spretus
ENSOGAG00000013245	YBX3	100	76.744	ENSMPUG00000011810	YBX3	100	75.969	Mustela_putorius_furo
ENSOGAG00000013245	YBX3	71	91.241	ENSMLUG00000007476	YBX3	99	89.051	Myotis_lucifugus
ENSOGAG00000013245	YBX3	85	85.449	ENSNGAG00000000710	Ybx3	97	85.586	Nannospalax_galili
ENSOGAG00000013245	YBX3	89	87.316	ENSNLEG00000034844	YBX3	97	84.986	Nomascus_leucogenys
ENSOGAG00000013245	YBX3	56	65.438	ENSMEUG00000002507	-	81	74.444	Notamacropus_eugenii
ENSOGAG00000013245	YBX3	82	84.790	ENSODEG00000017957	YBX3	93	83.591	Octodon_degus
ENSOGAG00000013245	YBX3	80	87.708	ENSOCUG00000001889	YBX3	87	87.582	Oryctolagus_cuniculus
ENSOGAG00000013245	YBX3	80	79.470	ENSOARG00000020919	YBX3	99	77.987	Ovis_aries
ENSOGAG00000013245	YBX3	100	82.586	ENSPPAG00000039068	YBX3	100	82.540	Pan_paniscus
ENSOGAG00000013245	YBX3	100	90.789	ENSPPRG00000005859	YBX3	100	91.053	Panthera_pardus
ENSOGAG00000013245	YBX3	77	93.127	ENSPTIG00000005322	YBX3	81	92.833	Panthera_tigris_altaica
ENSOGAG00000013245	YBX3	100	89.239	ENSPTRG00000004681	YBX3	100	89.501	Pan_troglodytes
ENSOGAG00000013245	YBX3	100	89.446	ENSPANG00000010280	YBX3	98	91.892	Papio_anubis
ENSOGAG00000013245	YBX3	56	98.095	ENSPSIG00000009247	YBX3	93	98.913	Pelodiscus_sinensis
ENSOGAG00000013245	YBX3	69	89.404	ENSPEMG00000010391	-	84	98.230	Peromyscus_maniculatus_bairdii
ENSOGAG00000013245	YBX3	87	89.666	ENSPEMG00000012132	-	89	98.230	Peromyscus_maniculatus_bairdii
ENSOGAG00000013245	YBX3	70	80.755	ENSPCIG00000029949	YBX3	100	80.755	Phascolarctos_cinereus
ENSOGAG00000013245	YBX3	100	89.182	ENSPPYG00000004279	YBX3	100	89.446	Pongo_abelii
ENSOGAG00000013245	YBX3	79	88.255	ENSPCAG00000001397	YBX3	98	88.014	Procavia_capensis
ENSOGAG00000013245	YBX3	71	89.098	ENSPCOG00000011663	YBX3	100	89.098	Propithecus_coquereli
ENSOGAG00000013245	YBX3	100	78.478	ENSPVAG00000006740	YBX3	77	91.186	Pteropus_vampyrus
ENSOGAG00000013245	YBX3	86	90.093	ENSRNOG00000005480	Ybx3	98	87.387	Rattus_norvegicus
ENSOGAG00000013245	YBX3	100	88.654	ENSRBIG00000039208	YBX3	100	88.918	Rhinopithecus_bieti
ENSOGAG00000013245	YBX3	100	88.918	ENSRROG00000029638	YBX3	100	89.182	Rhinopithecus_roxellana
ENSOGAG00000013245	YBX3	96	80.441	ENSSBOG00000030573	YBX3	86	89.933	Saimiri_boliviensis_boliviensis
ENSOGAG00000013245	YBX3	77	78.859	ENSSHAG00000003262	YBX3	98	79.195	Sarcophilus_harrisii
ENSOGAG00000013245	YBX3	94	85.831	ENSSSCG00000000633	YBX3	100	87.887	Sus_scrofa
ENSOGAG00000013245	YBX3	100	82.058	ENSTBEG00000012570	YBX3	81	90.033	Tupaia_belangeri
ENSOGAG00000013245	YBX3	71	81.618	ENSTTRG00000008045	YBX3	100	81.985	Tursiops_truncatus
ENSOGAG00000013245	YBX3	75	90.141	ENSUAMG00000016662	YBX3	100	90.141	Ursus_americanus
ENSOGAG00000013245	YBX3	77	93.127	ENSUMAG00000016118	YBX3	94	92.833	Ursus_maritimus
ENSOGAG00000013245	YBX3	77	66.554	ENSVPAG00000000876	YBX3	100	67.354	Vicugna_pacos
ENSOGAG00000013245	YBX3	75	90.493	ENSVVUG00000004956	YBX3	100	90.493	Vulpes_vulpes
ENSOGAG00000013245	YBX3	71	68.712	ENSXETG00000016239	ybx3	94	55.272	Xenopus_tropicalis