EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000013335 (Gene tree)
Gene ID: 100963013
Gene Symbol: -
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 1812 bases
Position: chrGL873633.1:6895654-6897465
Accession: 100963013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000011950	Exo_endo_phos	PF03372.23	4.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000013337	-	957	-	ENSOGAP00000011950	318 (aa)	XP_003797352	H0X8V7

Gene Model

Click here to download ENSOGAG00000013335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000013335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000013335	-	98	88.462	ENSOGAG00000029355	-	100	88.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000013335	-	100	94.340	ENSG00000100823	APEX1	100	94.340	Homo_sapiens
ENSOGAG00000013335	-	88	69.892	ENSAPOG00000017002	apex1	94	68.858	Acanthochromis_polyacanthus
ENSOGAG00000013335	-	100	95.912	ENSAMEG00000005418	APEX1	100	95.912	Ailuropoda_melanoleuca
ENSOGAG00000013335	-	87	71.223	ENSACIG00000010653	apex1	97	70.242	Amphilophus_citrinellus
ENSOGAG00000013335	-	88	69.534	ENSAOCG00000009649	apex1	99	65.190	Amphiprion_ocellaris
ENSOGAG00000013335	-	88	69.534	ENSAPEG00000021453	apex1	99	65.190	Amphiprion_percula
ENSOGAG00000013335	-	99	68.038	ENSATEG00000002883	apex1	97	68.038	Anabas_testudineus
ENSOGAG00000013335	-	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSOGAG00000013335	-	100	94.969	ENSANAG00000030117	APEX1	100	94.969	Aotus_nancymaae
ENSOGAG00000013335	-	87	71.377	ENSACLG00000018441	apex1	99	66.456	Astatotilapia_calliptera
ENSOGAG00000013335	-	100	65.938	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSOGAG00000013335	-	100	94.340	ENSBTAG00000002745	APEX1	100	94.340	Bos_taurus
ENSOGAG00000013335	-	84	43.542	WBGene00001372	exo-3	93	43.542	Caenorhabditis_elegans
ENSOGAG00000013335	-	100	95.283	ENSCJAG00000009726	APEX1	100	95.283	Callithrix_jacchus
ENSOGAG00000013335	-	100	94.340	ENSCAFG00000032033	APEX1	100	94.340	Canis_familiaris
ENSOGAG00000013335	-	54	91.279	ENSCAFG00020023002	-	96	91.279	Canis_lupus_dingo
ENSOGAG00000013335	-	100	94.340	ENSCAFG00020014377	-	100	94.340	Canis_lupus_dingo
ENSOGAG00000013335	-	98	75.321	ENSCHIG00000014537	-	99	75.321	Capra_hircus
ENSOGAG00000013335	-	100	93.711	ENSCHIG00000007298	-	100	93.711	Capra_hircus
ENSOGAG00000013335	-	100	94.969	ENSTSYG00000034813	APEX1	100	94.969	Carlito_syrichta
ENSOGAG00000013335	-	85	87.085	ENSCAPG00000016235	APEX1	91	95.763	Cavia_aperea
ENSOGAG00000013335	-	100	94.340	ENSCPOG00000030909	APEX1	100	94.340	Cavia_porcellus
ENSOGAG00000013335	-	100	81.447	ENSCCAG00000031931	-	100	81.447	Cebus_capucinus
ENSOGAG00000013335	-	100	95.283	ENSCCAG00000033056	-	100	95.283	Cebus_capucinus
ENSOGAG00000013335	-	100	94.654	ENSCATG00000015580	APEX1	100	94.654	Cercocebus_atys
ENSOGAG00000013335	-	100	94.969	ENSCLAG00000001002	APEX1	100	94.969	Chinchilla_lanigera
ENSOGAG00000013335	-	100	94.340	ENSCSAG00000016685	-	100	94.340	Chlorocebus_sabaeus
ENSOGAG00000013335	-	100	94.340	ENSCSAG00000016670	-	100	94.340	Chlorocebus_sabaeus
ENSOGAG00000013335	-	100	71.160	ENSCPBG00000009567	APEX1	100	71.160	Chrysemys_picta_bellii
ENSOGAG00000013335	-	91	55.932	ENSCING00000008137	-	94	55.932	Ciona_intestinalis
ENSOGAG00000013335	-	90	48.667	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSOGAG00000013335	-	100	94.654	ENSCANG00000030726	APEX1	100	94.654	Colobus_angolensis_palliatus
ENSOGAG00000013335	-	100	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSOGAG00000013335	-	100	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSOGAG00000013335	-	99	64.780	ENSCSEG00000017499	apex1	99	64.780	Cynoglossus_semilaevis
ENSOGAG00000013335	-	88	71.685	ENSCVAG00000022075	apex1	99	66.456	Cyprinodon_variegatus
ENSOGAG00000013335	-	100	65.723	ENSDARG00000045843	apex1	100	65.409	Danio_rerio
ENSOGAG00000013335	-	100	91.195	ENSDNOG00000042234	APEX1	95	91.195	Dasypus_novemcinctus
ENSOGAG00000013335	-	100	94.969	ENSDORG00000001616	Apex1	100	94.969	Dipodomys_ordii
ENSOGAG00000013335	-	100	93.711	ENSETEG00000004855	-	100	93.711	Echinops_telfairi
ENSOGAG00000013335	-	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSOGAG00000013335	-	100	96.855	ENSEASG00005017489	APEX1	74	96.855	Equus_asinus_asinus
ENSOGAG00000013335	-	100	96.855	ENSECAG00000022325	APEX1	82	96.855	Equus_caballus
ENSOGAG00000013335	-	91	92.708	ENSEEUG00000012569	APEX1	100	92.708	Erinaceus_europaeus
ENSOGAG00000013335	-	100	65.409	ENSELUG00000021706	apex1	100	65.625	Esox_lucius
ENSOGAG00000013335	-	100	96.226	ENSFCAG00000030869	APEX1	100	96.226	Felis_catus
ENSOGAG00000013335	-	100	94.025	ENSFDAG00000006120	APEX1	100	94.025	Fukomys_damarensis
ENSOGAG00000013335	-	99	67.722	ENSFHEG00000009031	apex1	83	67.722	Fundulus_heteroclitus
ENSOGAG00000013335	-	99	61.514	ENSGMOG00000007943	apex1	99	61.514	Gadus_morhua
ENSOGAG00000013335	-	99	68.038	ENSGAFG00000005311	apex1	99	68.038	Gambusia_affinis
ENSOGAG00000013335	-	99	65.506	ENSGACG00000019497	apex1	99	69.549	Gasterosteus_aculeatus
ENSOGAG00000013335	-	100	70.533	ENSGAGG00000014999	APEX1	100	70.533	Gopherus_agassizii
ENSOGAG00000013335	-	100	94.654	ENSGGOG00000002128	APEX1	100	94.654	Gorilla_gorilla
ENSOGAG00000013335	-	99	65.823	ENSHBUG00000005894	apex1	99	66.139	Haplochromis_burtoni
ENSOGAG00000013335	-	100	94.969	ENSHGLG00000002848	APEX1	100	94.969	Heterocephalus_glaber_female
ENSOGAG00000013335	-	100	94.969	ENSHGLG00100017878	APEX1	100	94.969	Heterocephalus_glaber_male
ENSOGAG00000013335	-	99	66.352	ENSHCOG00000009961	apex1	99	66.352	Hippocampus_comes
ENSOGAG00000013335	-	100	68.339	ENSIPUG00000005799	apex1	100	68.339	Ictalurus_punctatus
ENSOGAG00000013335	-	100	95.283	ENSSTOG00000010096	APEX1	100	95.283	Ictidomys_tridecemlineatus
ENSOGAG00000013335	-	100	84.906	ENSJJAG00000003660	-	100	84.906	Jaculus_jaculus
ENSOGAG00000013335	-	100	81.447	ENSJJAG00000020465	-	96	85.570	Jaculus_jaculus
ENSOGAG00000013335	-	100	94.025	ENSJJAG00000012067	-	100	94.025	Jaculus_jaculus
ENSOGAG00000013335	-	88	71.685	ENSKMAG00000021171	apex1	99	66.456	Kryptolebias_marmoratus
ENSOGAG00000013335	-	99	64.241	ENSLBEG00000010248	apex1	99	64.241	Labrus_bergylta
ENSOGAG00000013335	-	100	67.500	ENSLACG00000008617	APEX1	100	67.500	Latimeria_chalumnae
ENSOGAG00000013335	-	100	66.352	ENSLOCG00000015516	apex1	99	66.352	Lepisosteus_oculatus
ENSOGAG00000013335	-	100	93.396	ENSLAFG00000021872	APEX1	100	93.396	Loxodonta_africana
ENSOGAG00000013335	-	100	94.654	ENSMFAG00000002565	APEX1	100	94.654	Macaca_fascicularis
ENSOGAG00000013335	-	100	94.654	ENSMMUG00000048039	APEX1	100	94.654	Macaca_mulatta
ENSOGAG00000013335	-	100	94.654	ENSMNEG00000036944	APEX1	100	94.654	Macaca_nemestrina
ENSOGAG00000013335	-	100	94.654	ENSMLEG00000042125	APEX1	100	94.654	Mandrillus_leucophaeus
ENSOGAG00000013335	-	88	72.401	ENSMAMG00000023526	apex1	99	67.823	Mastacembelus_armatus
ENSOGAG00000013335	-	87	71.377	ENSMZEG00005014187	apex1	99	66.456	Maylandia_zebra
ENSOGAG00000013335	-	100	92.767	ENSMAUG00000013994	Apex1	100	92.767	Mesocricetus_auratus
ENSOGAG00000013335	-	100	97.484	ENSMICG00000043554	APEX1	100	97.484	Microcebus_murinus
ENSOGAG00000013335	-	100	93.396	ENSMOCG00000013721	Apex1	100	93.396	Microtus_ochrogaster
ENSOGAG00000013335	-	88	68.214	ENSMMOG00000010031	apex1	97	63.950	Mola_mola
ENSOGAG00000013335	-	100	85.000	ENSMODG00000007125	APEX1	100	86.957	Monodelphis_domestica
ENSOGAG00000013335	-	88	64.875	ENSMALG00000011699	apex1	79	63.481	Monopterus_albus
ENSOGAG00000013335	-	99	93.375	MGP_CAROLIEiJ_G0019209	Apex1	99	93.375	Mus_caroli
ENSOGAG00000013335	-	100	94.025	ENSMUSG00000035960	Apex1	100	94.025	Mus_musculus
ENSOGAG00000013335	-	100	93.396	MGP_PahariEiJ_G0030232	Apex1	100	93.396	Mus_pahari
ENSOGAG00000013335	-	100	94.025	MGP_SPRETEiJ_G0020101	Apex1	100	94.025	Mus_spretus
ENSOGAG00000013335	-	100	94.375	ENSMLUG00000028957	APEX1	100	94.375	Myotis_lucifugus
ENSOGAG00000013335	-	100	69.497	ENSNGAG00000021748	-	99	69.497	Nannospalax_galili
ENSOGAG00000013335	-	100	93.082	ENSNGAG00000002725	-	100	93.082	Nannospalax_galili
ENSOGAG00000013335	-	87	71.014	ENSNBRG00000005334	apex1	91	66.139	Neolamprologus_brichardi
ENSOGAG00000013335	-	100	94.654	ENSNLEG00000010839	APEX1	100	94.654	Nomascus_leucogenys
ENSOGAG00000013335	-	100	87.736	ENSMEUG00000014519	APEX1	100	87.736	Notamacropus_eugenii
ENSOGAG00000013335	-	100	93.396	ENSOPRG00000014029	APEX1	100	93.396	Ochotona_princeps
ENSOGAG00000013335	-	97	76.052	ENSODEG00000004777	-	99	76.052	Octodon_degus
ENSOGAG00000013335	-	100	72.222	ENSODEG00000006583	-	100	72.222	Octodon_degus
ENSOGAG00000013335	-	100	95.283	ENSODEG00000001703	-	100	95.283	Octodon_degus
ENSOGAG00000013335	-	87	71.583	ENSONIG00000012089	apex1	99	66.772	Oreochromis_niloticus
ENSOGAG00000013335	-	90	82.105	ENSOANG00000008836	APEX1	80	77.778	Ornithorhynchus_anatinus
ENSOGAG00000013335	-	100	94.340	ENSOCUG00000005022	APEX1	100	94.340	Oryctolagus_cuniculus
ENSOGAG00000013335	-	99	67.925	ENSORLG00000012378	apex1	99	67.925	Oryzias_latipes
ENSOGAG00000013335	-	99	67.925	ENSORLG00020021371	apex1	99	67.925	Oryzias_latipes_hni
ENSOGAG00000013335	-	99	67.925	ENSORLG00015020089	apex1	99	67.925	Oryzias_latipes_hsok
ENSOGAG00000013335	-	99	67.610	ENSOMEG00000018876	apex1	99	67.610	Oryzias_melastigma
ENSOGAG00000013335	-	100	92.767	ENSOARG00000019740	-	100	92.767	Ovis_aries
ENSOGAG00000013335	-	97	89.935	ENSOARG00000001876	-	100	89.935	Ovis_aries
ENSOGAG00000013335	-	99	79.430	ENSOARG00000014424	-	100	79.430	Ovis_aries
ENSOGAG00000013335	-	100	94.654	ENSPPAG00000038760	APEX1	100	94.654	Pan_paniscus
ENSOGAG00000013335	-	100	95.912	ENSPPRG00000011794	APEX1	100	95.912	Panthera_pardus
ENSOGAG00000013335	-	100	96.226	ENSPTIG00000014829	APEX1	100	96.226	Panthera_tigris_altaica
ENSOGAG00000013335	-	100	94.654	ENSPTRG00000006093	APEX1	100	94.654	Pan_troglodytes
ENSOGAG00000013335	-	100	94.654	ENSPANG00000022757	APEX1	100	94.654	Papio_anubis
ENSOGAG00000013335	-	87	68.953	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSOGAG00000013335	-	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSOGAG00000013335	-	100	94.654	ENSPEMG00000019097	Apex1	100	94.654	Peromyscus_maniculatus_bairdii
ENSOGAG00000013335	-	94	66.000	ENSPMAG00000007275	-	99	66.000	Petromyzon_marinus
ENSOGAG00000013335	-	100	84.639	ENSPCIG00000023274	APEX1	100	86.604	Phascolarctos_cinereus
ENSOGAG00000013335	-	88	73.118	ENSPFOG00000004178	apex1	99	68.038	Poecilia_formosa
ENSOGAG00000013335	-	88	72.760	ENSPLAG00000012779	apex1	99	67.722	Poecilia_latipinna
ENSOGAG00000013335	-	88	73.118	ENSPMEG00000019623	apex1	99	68.038	Poecilia_mexicana
ENSOGAG00000013335	-	88	72.760	ENSPREG00000014298	apex1	99	67.722	Poecilia_reticulata
ENSOGAG00000013335	-	100	94.340	ENSPPYG00000005565	APEX1	100	94.340	Pongo_abelii
ENSOGAG00000013335	-	100	91.824	ENSPCAG00000010376	APEX1	100	91.824	Procavia_capensis
ENSOGAG00000013335	-	100	97.484	ENSPCOG00000021564	APEX1	100	97.484	Propithecus_coquereli
ENSOGAG00000013335	-	100	95.312	ENSPVAG00000010736	APEX1	100	95.312	Pteropus_vampyrus
ENSOGAG00000013335	-	87	71.377	ENSPNYG00000023940	apex1	99	66.456	Pundamilia_nyererei
ENSOGAG00000013335	-	93	64.865	ENSPNAG00000020897	apex1	96	64.746	Pygocentrus_nattereri
ENSOGAG00000013335	-	100	93.082	ENSRNOG00000009663	Apex1	100	93.082	Rattus_norvegicus
ENSOGAG00000013335	-	100	94.654	ENSRBIG00000038325	APEX1	99	94.654	Rhinopithecus_bieti
ENSOGAG00000013335	-	100	94.969	ENSSBOG00000018921	-	100	94.969	Saimiri_boliviensis_boliviensis
ENSOGAG00000013335	-	100	80.818	ENSSBOG00000031372	-	100	80.818	Saimiri_boliviensis_boliviensis
ENSOGAG00000013335	-	100	83.642	ENSSHAG00000013524	APEX1	100	84.663	Sarcophilus_harrisii
ENSOGAG00000013335	-	100	63.208	ENSSFOG00015001948	apex1	100	63.522	Scleropages_formosus
ENSOGAG00000013335	-	87	70.144	ENSSMAG00000013348	apex1	99	65.217	Scophthalmus_maximus
ENSOGAG00000013335	-	88	70.968	ENSSDUG00000016377	apex1	99	66.139	Seriola_dumerili
ENSOGAG00000013335	-	88	71.326	ENSSLDG00000023005	apex1	99	66.456	Seriola_lalandi_dorsalis
ENSOGAG00000013335	-	90	72.982	ENSSPUG00000000531	APEX1	95	72.982	Sphenodon_punctatus
ENSOGAG00000013335	-	88	70.251	ENSSPAG00000000458	apex1	96	68.259	Stegastes_partitus
ENSOGAG00000013335	-	100	94.340	ENSSSCG00000040060	-	100	94.340	Sus_scrofa
ENSOGAG00000013335	-	96	55.161	ENSSSCG00000039705	-	99	57.285	Sus_scrofa
ENSOGAG00000013335	-	74	59.746	ENSTGUG00000014378	APEX1	100	59.746	Taeniopygia_guttata
ENSOGAG00000013335	-	87	67.986	ENSTRUG00000004268	apex1	95	63.924	Takifugu_rubripes
ENSOGAG00000013335	-	99	64.873	ENSTNIG00000005778	apex1	99	64.873	Tetraodon_nigroviridis
ENSOGAG00000013335	-	100	91.195	ENSTBEG00000006405	APEX1	100	91.195	Tupaia_belangeri
ENSOGAG00000013335	-	74	94.492	ENSTTRG00000007860	APEX1	100	94.492	Tursiops_truncatus
ENSOGAG00000013335	-	100	95.597	ENSUAMG00000010457	APEX1	100	95.597	Ursus_americanus
ENSOGAG00000013335	-	100	95.597	ENSUMAG00000009178	APEX1	100	95.597	Ursus_maritimus
ENSOGAG00000013335	-	74	88.983	ENSVPAG00000005083	APEX1	100	88.983	Vicugna_pacos
ENSOGAG00000013335	-	100	94.654	ENSVVUG00000009010	APEX1	100	94.654	Vulpes_vulpes
ENSOGAG00000013335	-	100	65.204	ENSXETG00000024773	apex1	100	68.125	Xenopus_tropicalis
ENSOGAG00000013335	-	88	72.760	ENSXCOG00000015233	apex1	99	67.722	Xiphophorus_couchianus
ENSOGAG00000013335	-	88	72.760	ENSXMAG00000006195	apex1	99	67.722	Xiphophorus_maculatus