EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000013356 (Gene tree)
Gene ID: 100953144
Gene Symbol: SND1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 457542 bases
Position: chrGL873556.1:1213359-1670900
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000011970	TUDOR	PF00567.24	3.9e-28	1	1
ENSOGAP00000011970	SNase	PF00565.17	4.7e-68	1	5
ENSOGAP00000011970	SNase	PF00565.17	4.7e-68	2	5
ENSOGAP00000011970	SNase	PF00565.17	4.7e-68	3	5
ENSOGAP00000011970	SNase	PF00565.17	4.7e-68	4	5
ENSOGAP00000011970	SNase	PF00565.17	4.7e-68	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000013359	SND1-201	2966	-	ENSOGAP00000011970	967 (aa)	-	H0X8X7

Gene Model

Click here to download ENSOGAG00000013356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000013356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000013356	SND1	94	99.013	ENSG00000197157	SND1	100	99.013	Homo_sapiens
ENSOGAG00000013356	SND1	94	83.698	ENSAPOG00000017599	snd1	99	84.573	Acanthochromis_polyacanthus
ENSOGAG00000013356	SND1	100	96.070	ENSAMEG00000004664	SND1	100	96.070	Ailuropoda_melanoleuca
ENSOGAG00000013356	SND1	92	82.011	ENSACIG00000003551	snd1	99	81.889	Amphilophus_citrinellus
ENSOGAG00000013356	SND1	94	83.479	ENSAOCG00000014166	snd1	99	84.351	Amphiprion_ocellaris
ENSOGAG00000013356	SND1	94	83.479	ENSAPEG00000007067	snd1	99	84.351	Amphiprion_percula
ENSOGAG00000013356	SND1	93	82.832	ENSATEG00000018475	snd1	88	84.073	Anabas_testudineus
ENSOGAG00000013356	SND1	94	98.794	ENSANAG00000034463	SND1	100	98.794	Aotus_nancymaae
ENSOGAG00000013356	SND1	93	83.333	ENSACLG00000022897	snd1	99	84.000	Astatotilapia_calliptera
ENSOGAG00000013356	SND1	94	83.974	ENSAMXG00000016318	snd1	98	84.556	Astyanax_mexicanus
ENSOGAG00000013356	SND1	94	98.355	ENSBTAG00000010692	SND1	100	98.355	Bos_taurus
ENSOGAG00000013356	SND1	94	46.417	WBGene00006626	tsn-1	98	47.265	Caenorhabditis_elegans
ENSOGAG00000013356	SND1	94	98.575	ENSCJAG00000017668	SND1	100	98.575	Callithrix_jacchus
ENSOGAG00000013356	SND1	94	98.794	ENSCAFG00000001700	SND1	100	98.794	Canis_familiaris
ENSOGAG00000013356	SND1	94	98.794	ENSCAFG00020021639	SND1	100	98.794	Canis_lupus_dingo
ENSOGAG00000013356	SND1	94	98.684	ENSCHIG00000023390	SND1	100	98.684	Capra_hircus
ENSOGAG00000013356	SND1	69	98.596	ENSTSYG00000004979	SND1	96	98.596	Carlito_syrichta
ENSOGAG00000013356	SND1	93	84.257	ENSCAPG00000010677	SND1	98	84.298	Cavia_aperea
ENSOGAG00000013356	SND1	94	97.588	ENSCPOG00000006251	SND1	100	97.588	Cavia_porcellus
ENSOGAG00000013356	SND1	94	98.904	ENSCCAG00000036847	SND1	100	98.904	Cebus_capucinus
ENSOGAG00000013356	SND1	94	99.232	ENSCATG00000035214	SND1	100	99.232	Cercocebus_atys
ENSOGAG00000013356	SND1	94	97.917	ENSCLAG00000011796	SND1	100	97.917	Chinchilla_lanigera
ENSOGAG00000013356	SND1	94	99.232	ENSCSAG00000010182	SND1	100	99.232	Chlorocebus_sabaeus
ENSOGAG00000013356	SND1	73	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSOGAG00000013356	SND1	94	91.886	ENSCPBG00000018094	SND1	98	92.841	Chrysemys_picta_bellii
ENSOGAG00000013356	SND1	92	56.796	ENSCING00000000524	-	98	56.796	Ciona_intestinalis
ENSOGAG00000013356	SND1	93	58.288	ENSCSAVG00000008807	-	99	58.434	Ciona_savignyi
ENSOGAG00000013356	SND1	94	99.232	ENSCANG00000035119	SND1	100	99.232	Colobus_angolensis_palliatus
ENSOGAG00000013356	SND1	94	96.930	ENSCGRG00001022514	Snd1	100	96.930	Cricetulus_griseus_chok1gshd
ENSOGAG00000013356	SND1	92	96.953	ENSCGRG00000012277	Snd1	99	96.953	Cricetulus_griseus_crigri
ENSOGAG00000013356	SND1	92	84.375	ENSCSEG00000008661	snd1	98	84.375	Cynoglossus_semilaevis
ENSOGAG00000013356	SND1	94	83.917	ENSCVAG00000010316	snd1	100	83.601	Cyprinodon_variegatus
ENSOGAG00000013356	SND1	94	84.372	ENSDARG00000006766	snd1	95	88.257	Danio_rerio
ENSOGAG00000013356	SND1	92	96.054	ENSDNOG00000006795	SND1	100	96.054	Dasypus_novemcinctus
ENSOGAG00000013356	SND1	94	98.246	ENSDORG00000000336	Snd1	100	98.246	Dipodomys_ordii
ENSOGAG00000013356	SND1	93	50.811	FBgn0035121	Tudor-SN	98	50.919	Drosophila_melanogaster
ENSOGAG00000013356	SND1	85	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSOGAG00000013356	SND1	54	64.691	ENSEBUG00000014201	-	84	75.410	Eptatretus_burgeri
ENSOGAG00000013356	SND1	94	97.306	ENSEASG00005008513	SND1	100	97.306	Equus_asinus_asinus
ENSOGAG00000013356	SND1	94	98.904	ENSECAG00000011451	SND1	100	98.904	Equus_caballus
ENSOGAG00000013356	SND1	94	86.404	ENSEEUG00000014737	SND1	100	86.404	Erinaceus_europaeus
ENSOGAG00000013356	SND1	94	82.166	ENSELUG00000001805	snd1	95	83.092	Esox_lucius
ENSOGAG00000013356	SND1	94	98.794	ENSFCAG00000008289	SND1	100	98.794	Felis_catus
ENSOGAG00000013356	SND1	94	97.917	ENSFDAG00000015881	SND1	100	97.917	Fukomys_damarensis
ENSOGAG00000013356	SND1	94	82.239	ENSFHEG00000004093	snd1	97	84.785	Fundulus_heteroclitus
ENSOGAG00000013356	SND1	60	75.424	ENSGMOG00000018932	snd1	64	75.424	Gadus_morhua
ENSOGAG00000013356	SND1	94	84.136	ENSGAFG00000008421	snd1	99	85.039	Gambusia_affinis
ENSOGAG00000013356	SND1	94	53.954	ENSGACG00000019793	snd1	98	53.312	Gasterosteus_aculeatus
ENSOGAG00000013356	SND1	94	99.232	ENSGGOG00000009614	SND1	100	99.232	Gorilla_gorilla
ENSOGAG00000013356	SND1	93	83.516	ENSHBUG00000019135	snd1	99	84.000	Haplochromis_burtoni
ENSOGAG00000013356	SND1	94	97.807	ENSHGLG00000003618	SND1	100	97.807	Heterocephalus_glaber_female
ENSOGAG00000013356	SND1	94	97.354	ENSHGLG00100012449	SND1	100	97.354	Heterocephalus_glaber_male
ENSOGAG00000013356	SND1	95	82.213	ENSHCOG00000005266	snd1	98	83.817	Hippocampus_comes
ENSOGAG00000013356	SND1	94	82.205	ENSIPUG00000013279	snd1	98	83.222	Ictalurus_punctatus
ENSOGAG00000013356	SND1	94	98.246	ENSSTOG00000002140	SND1	100	98.246	Ictidomys_tridecemlineatus
ENSOGAG00000013356	SND1	94	98.575	ENSJJAG00000009561	Snd1	100	98.575	Jaculus_jaculus
ENSOGAG00000013356	SND1	94	83.917	ENSKMAG00000016997	snd1	98	84.933	Kryptolebias_marmoratus
ENSOGAG00000013356	SND1	94	84.615	ENSLBEG00000013563	snd1	99	83.574	Labrus_bergylta
ENSOGAG00000013356	SND1	93	85.039	ENSLOCG00000015537	snd1	98	85.039	Lepisosteus_oculatus
ENSOGAG00000013356	SND1	94	98.026	ENSLAFG00000009696	SND1	100	98.026	Loxodonta_africana
ENSOGAG00000013356	SND1	94	99.232	ENSMFAG00000038114	SND1	100	99.232	Macaca_fascicularis
ENSOGAG00000013356	SND1	94	99.232	ENSMMUG00000015432	SND1	100	99.232	Macaca_mulatta
ENSOGAG00000013356	SND1	94	99.232	ENSMNEG00000039808	SND1	100	99.232	Macaca_nemestrina
ENSOGAG00000013356	SND1	94	99.123	ENSMLEG00000029040	SND1	100	99.123	Mandrillus_leucophaeus
ENSOGAG00000013356	SND1	94	83.718	ENSMAMG00000011739	snd1	98	84.410	Mastacembelus_armatus
ENSOGAG00000013356	SND1	93	83.333	ENSMZEG00005005681	snd1	99	84.000	Maylandia_zebra
ENSOGAG00000013356	SND1	100	98.242	ENSMICG00000000097	SND1	100	99.013	Microcebus_murinus
ENSOGAG00000013356	SND1	94	97.697	ENSMOCG00000005040	Snd1	100	97.697	Microtus_ochrogaster
ENSOGAG00000013356	SND1	94	83.260	ENSMMOG00000001795	snd1	99	84.129	Mola_mola
ENSOGAG00000013356	SND1	93	95.551	ENSMODG00000015182	SND1	99	95.551	Monodelphis_domestica
ENSOGAG00000013356	SND1	94	82.932	ENSMALG00000012071	snd1	98	83.742	Monopterus_albus
ENSOGAG00000013356	SND1	94	97.259	MGP_CAROLIEiJ_G0028159	Snd1	100	97.259	Mus_caroli
ENSOGAG00000013356	SND1	94	97.039	ENSMUSG00000001424	Snd1	100	97.039	Mus_musculus
ENSOGAG00000013356	SND1	94	97.259	MGP_PahariEiJ_G0021917	Snd1	100	97.647	Mus_pahari
ENSOGAG00000013356	SND1	94	97.259	MGP_SPRETEiJ_G0029159	Snd1	100	97.259	Mus_spretus
ENSOGAG00000013356	SND1	94	98.136	ENSMPUG00000006545	SND1	100	98.136	Mustela_putorius_furo
ENSOGAG00000013356	SND1	92	97.318	ENSMLUG00000017130	SND1	99	97.318	Myotis_lucifugus
ENSOGAG00000013356	SND1	94	97.588	ENSNGAG00000011186	Snd1	100	97.588	Nannospalax_galili
ENSOGAG00000013356	SND1	93	83.224	ENSNBRG00000006681	snd1	99	83.889	Neolamprologus_brichardi
ENSOGAG00000013356	SND1	94	99.123	ENSNLEG00000012263	SND1	100	99.211	Nomascus_leucogenys
ENSOGAG00000013356	SND1	86	100.000	ENSOPRG00000013405	SND1	91	100.000	Ochotona_princeps
ENSOGAG00000013356	SND1	94	97.917	ENSODEG00000011502	SND1	100	97.917	Octodon_degus
ENSOGAG00000013356	SND1	97	81.410	ENSONIG00000011481	snd1	96	83.889	Oreochromis_niloticus
ENSOGAG00000013356	SND1	92	94.045	ENSOANG00000000817	SND1	99	93.437	Ornithorhynchus_anatinus
ENSOGAG00000013356	SND1	94	97.039	ENSOCUG00000001620	SND1	100	97.039	Oryctolagus_cuniculus
ENSOGAG00000013356	SND1	93	83.835	ENSORLG00000015201	snd1	98	83.835	Oryzias_latipes
ENSOGAG00000013356	SND1	93	83.946	ENSORLG00020013991	snd1	98	83.946	Oryzias_latipes_hni
ENSOGAG00000013356	SND1	93	83.946	ENSORLG00015012436	snd1	98	83.946	Oryzias_latipes_hsok
ENSOGAG00000013356	SND1	94	82.823	ENSOMEG00000006406	snd1	98	84.040	Oryzias_melastigma
ENSOGAG00000013356	SND1	92	95.716	ENSOARG00000002149	SND1	100	95.716	Ovis_aries
ENSOGAG00000013356	SND1	94	99.123	ENSPPAG00000042947	SND1	100	99.123	Pan_paniscus
ENSOGAG00000013356	SND1	94	98.794	ENSPPRG00000004494	SND1	100	98.794	Panthera_pardus
ENSOGAG00000013356	SND1	94	98.684	ENSPTIG00000014214	SND1	100	98.684	Panthera_tigris_altaica
ENSOGAG00000013356	SND1	94	99.123	ENSPTRG00000023911	SND1	100	99.123	Pan_troglodytes
ENSOGAG00000013356	SND1	92	99.210	ENSPANG00000011997	SND1	99	99.210	Papio_anubis
ENSOGAG00000013356	SND1	93	81.518	ENSPKIG00000023494	snd1	98	81.838	Paramormyrops_kingsleyae
ENSOGAG00000013356	SND1	86	82.676	ENSPMGG00000003629	snd1	100	82.676	Periophthalmus_magnuspinnatus
ENSOGAG00000013356	SND1	94	97.588	ENSPEMG00000010240	Snd1	100	97.588	Peromyscus_maniculatus_bairdii
ENSOGAG00000013356	SND1	91	73.844	ENSPMAG00000007915	-	99	73.844	Petromyzon_marinus
ENSOGAG00000013356	SND1	94	95.943	ENSPCIG00000011561	SND1	100	95.943	Phascolarctos_cinereus
ENSOGAG00000013356	SND1	94	83.807	ENSPFOG00000001557	snd1	99	84.684	Poecilia_formosa
ENSOGAG00000013356	SND1	95	83.388	ENSPLAG00000018459	snd1	96	84.684	Poecilia_latipinna
ENSOGAG00000013356	SND1	94	84.245	ENSPMEG00000006803	snd1	99	85.128	Poecilia_mexicana
ENSOGAG00000013356	SND1	94	83.917	ENSPREG00000002189	snd1	99	84.795	Poecilia_reticulata
ENSOGAG00000013356	SND1	89	97.922	ENSPPYG00000017972	SND1	100	97.922	Pongo_abelii
ENSOGAG00000013356	SND1	94	86.623	ENSPCAG00000011305	SND1	99	86.541	Procavia_capensis
ENSOGAG00000013356	SND1	94	99.232	ENSPCOG00000026791	SND1	100	99.232	Propithecus_coquereli
ENSOGAG00000013356	SND1	94	96.820	ENSPVAG00000013945	SND1	100	96.820	Pteropus_vampyrus
ENSOGAG00000013356	SND1	93	83.333	ENSPNYG00000000932	snd1	99	84.000	Pundamilia_nyererei
ENSOGAG00000013356	SND1	94	83.079	ENSPNAG00000001206	snd1	98	84.035	Pygocentrus_nattereri
ENSOGAG00000013356	SND1	94	96.923	ENSRNOG00000031173	Snd1	99	96.923	Rattus_norvegicus
ENSOGAG00000013356	SND1	69	99.429	ENSRBIG00000027782	-	93	99.429	Rhinopithecus_bieti
ENSOGAG00000013356	SND1	94	99.232	ENSRROG00000033020	SND1	100	99.232	Rhinopithecus_roxellana
ENSOGAG00000013356	SND1	94	98.794	ENSSBOG00000032461	SND1	100	98.794	Saimiri_boliviensis_boliviensis
ENSOGAG00000013356	SND1	92	92.584	ENSSHAG00000015359	SND1	100	92.584	Sarcophilus_harrisii
ENSOGAG00000013356	SND1	94	82.193	ENSSFOG00015001103	snd1	98	83.278	Scleropages_formosus
ENSOGAG00000013356	SND1	92	83.817	ENSSMAG00000001932	snd1	93	83.556	Scophthalmus_maximus
ENSOGAG00000013356	SND1	94	83.479	ENSSDUG00000002699	snd1	92	84.351	Seriola_dumerili
ENSOGAG00000013356	SND1	94	76.258	ENSSLDG00000001950	snd1	98	77.026	Seriola_lalandi_dorsalis
ENSOGAG00000013356	SND1	81	97.170	ENSSARG00000004877	SND1	92	97.170	Sorex_araneus
ENSOGAG00000013356	SND1	69	87.478	ENSSPUG00000017586	SND1	96	87.478	Sphenodon_punctatus
ENSOGAG00000013356	SND1	69	84.317	ENSSPAG00000021398	snd1	96	86.435	Stegastes_partitus
ENSOGAG00000013356	SND1	94	98.465	ENSSSCG00000016590	SND1	100	98.465	Sus_scrofa
ENSOGAG00000013356	SND1	94	83.394	ENSTRUG00000014067	snd1	98	83.594	Takifugu_rubripes
ENSOGAG00000013356	SND1	94	83.406	ENSTNIG00000011019	snd1	98	84.152	Tetraodon_nigroviridis
ENSOGAG00000013356	SND1	88	92.941	ENSTBEG00000003999	SND1	100	92.941	Tupaia_belangeri
ENSOGAG00000013356	SND1	94	93.860	ENSTTRG00000006059	SND1	100	93.860	Tursiops_truncatus
ENSOGAG00000013356	SND1	67	89.406	ENSUAMG00000002820	-	86	89.572	Ursus_americanus
ENSOGAG00000013356	SND1	86	98.295	ENSUAMG00000005604	-	93	98.295	Ursus_americanus
ENSOGAG00000013356	SND1	94	98.575	ENSUMAG00000005960	SND1	100	98.575	Ursus_maritimus
ENSOGAG00000013356	SND1	69	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSOGAG00000013356	SND1	94	98.575	ENSVVUG00000007226	SND1	100	98.575	Vulpes_vulpes
ENSOGAG00000013356	SND1	91	84.442	ENSXETG00000023043	snd1	100	84.361	Xenopus_tropicalis
ENSOGAG00000013356	SND1	87	81.398	ENSXCOG00000013629	snd1	99	81.398	Xiphophorus_couchianus
ENSOGAG00000013356	SND1	94	84.136	ENSXMAG00000011469	snd1	99	85.017	Xiphophorus_maculatus