EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOGAG00000016148 (Gene tree)
Gene ID
100961565
Gene Symbol
SMARCA4
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Otolemur_garnettii
Status
putative
Strand
Minus strand
Length
99110 bases
Position
chrGL873646.1:3028814-3127923
Accession
11100
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOGAP00000014461ResIIIPF04851.151e-0911
ENSOGAP00000017699ResIIIPF04851.151.1e-0911
ENSOGAP00000014461BRKPF07533.168.5e-1811
ENSOGAP00000017699BRKPF07533.168.7e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOGAT00000033974SMARCA4-2014685-ENSOGAP000000176991505 (aa)-H0XNK8
ENSOGAT00000016157SMARCA4-2024502-ENSOGAP000000144611444 (aa)-H0XES2
Gene Model
Click here to download ENSOGAG00000016148's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000016148's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOGAG00000016148SMARCA47782.056ENSOGAG00000017053SMARCA26981.495
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOGAG00000016148SMARCA410097.645ENSG00000127616SMARCA410097.452Homo_sapiens
ENSOGAG00000016148SMARCA410082.251ENSAPOG00000004542SMARCA49382.058Acanthochromis_polyacanthus
ENSOGAG00000016148SMARCA47585.415ENSAPOG00000003509smarca4a8685.141Acanthochromis_polyacanthus
ENSOGAG00000016148SMARCA410093.369ENSAMEG00000010868SMARCA49093.369Ailuropoda_melanoleuca
ENSOGAG00000016148SMARCA410082.666ENSACIG00000003035-9084.868Amphilophus_citrinellus
ENSOGAG00000016148SMARCA410085.112ENSACIG00000021550smarca4a8985.938Amphilophus_citrinellus
ENSOGAG00000016148SMARCA410085.359ENSAOCG00000009450-9385.763Amphiprion_ocellaris
ENSOGAG00000016148SMARCA410084.265ENSAOCG00000019167smarca4a9985.103Amphiprion_ocellaris
ENSOGAG00000016148SMARCA410084.334ENSAPEG00000015559smarca4a9985.172Amphiprion_percula
ENSOGAG00000016148SMARCA410082.334ENSAPEG00000023108-9082.039Amphiprion_percula
ENSOGAG00000016148SMARCA410082.422ENSATEG00000001094-9680.494Anabas_testudineus
ENSOGAG00000016148SMARCA410085.656ENSATEG00000011524smarca4a8985.870Anabas_testudineus
ENSOGAG00000016148SMARCA410097.441ENSANAG00000036991SMARCA49094.511Aotus_nancymaae
ENSOGAG00000016148SMARCA410086.335ENSACLG00000000163smarca4a9186.005Astatotilapia_calliptera
ENSOGAG00000016148SMARCA410081.734ENSACLG00000008638-9184.704Astatotilapia_calliptera
ENSOGAG00000016148SMARCA410080.331ENSAMXG00000021023smarca4a8987.500Astyanax_mexicanus
ENSOGAG00000016148SMARCA410085.695ENSAMXG00000011238-9979.156Astyanax_mexicanus
ENSOGAG00000016148SMARCA410096.814ENSBTAG00000019220SMARCA48996.814Bos_taurus
ENSOGAG00000016148SMARCA410094.511ENSCJAG00000005936SMARCA49094.511Callithrix_jacchus
ENSOGAG00000016148SMARCA410097.576ENSCAFG00000017584SMARCA48997.576Canis_familiaris
ENSOGAG00000016148SMARCA410097.576ENSCAFG00020024620SMARCA49096.180Canis_lupus_dingo
ENSOGAG00000016148SMARCA410091.845ENSCHIG00000015318SMARCA48991.845Capra_hircus
ENSOGAG00000016148SMARCA410097.368ENSTSYG00000012966SMARCA48997.167Carlito_syrichta
ENSOGAG00000016148SMARCA410086.427ENSCAPG00000015932SMARCA49192.432Cavia_aperea
ENSOGAG00000016148SMARCA410097.022ENSCPOG00000015549SMARCA48997.022Cavia_porcellus
ENSOGAG00000016148SMARCA410094.114ENSCCAG00000031660SMARCA48893.728Cebus_capucinus
ENSOGAG00000016148SMARCA410097.645ENSCATG00000029530SMARCA48997.645Cercocebus_atys
ENSOGAG00000016148SMARCA410096.607ENSCLAG00000011946SMARCA48996.607Chinchilla_lanigera
ENSOGAG00000016148SMARCA410095.439ENSCPBG00000009994SMARCA48994.979Chrysemys_picta_bellii
ENSOGAG00000016148SMARCA410097.576ENSCANG00000036013SMARCA48997.576Colobus_angolensis_palliatus
ENSOGAG00000016148SMARCA410097.091ENSCGRG00001016732Smarca48997.091Cricetulus_griseus_chok1gshd
ENSOGAG00000016148SMARCA410097.091ENSCGRG00000017242Smarca49197.091Cricetulus_griseus_crigri
ENSOGAG00000016148SMARCA49685.704ENSCSEG00000014771smarca4a9085.996Cynoglossus_semilaevis
ENSOGAG00000016148SMARCA410085.635ENSCVAG00000003018-9185.981Cyprinodon_variegatus
ENSOGAG00000016148SMARCA410084.867ENSCVAG00000006979smarca4a9085.432Cyprinodon_variegatus
ENSOGAG00000016148SMARCA49682.017ENSDARG00000104339SMARCA48982.575Danio_rerio
ENSOGAG00000016148SMARCA410086.490ENSDARG00000077226smarca4a8986.490Danio_rerio
ENSOGAG00000016148SMARCA410086.834ENSDNOG00000048847SMARCA48196.270Dasypus_novemcinctus
ENSOGAG00000016148SMARCA49689.500ENSDORG00000002544Smarca49190.058Dipodomys_ordii
ENSOGAG00000016148SMARCA410084.563ENSETEG00000013361SMARCA48984.563Echinops_telfairi
ENSOGAG00000016148SMARCA410097.230ENSEASG00005006167SMARCA48897.230Equus_asinus_asinus
ENSOGAG00000016148SMARCA410097.299ENSECAG00000008334SMARCA49097.299Equus_caballus
ENSOGAG00000016148SMARCA410076.141ENSELUG00000023232-8384.589Esox_lucius
ENSOGAG00000016148SMARCA410084.750ENSELUG00000010247smarca4a8984.573Esox_lucius
ENSOGAG00000016148SMARCA410097.305ENSFCAG00000004894SMARCA48997.305Felis_catus
ENSOGAG00000016148SMARCA47695.455ENSFALG00000004208SMARCA48789.399Ficedula_albicollis
ENSOGAG00000016148SMARCA410096.750ENSFDAG00000012237SMARCA49596.750Fukomys_damarensis
ENSOGAG00000016148SMARCA410083.400ENSFHEG00000007902-9082.724Fundulus_heteroclitus
ENSOGAG00000016148SMARCA410081.573ENSFHEG00000010182smarca4a9683.539Fundulus_heteroclitus
ENSOGAG00000016148SMARCA49380.750ENSGMOG00000005756-7680.355Gadus_morhua
ENSOGAG00000016148SMARCA49278.571ENSGMOG00000002649smarca4a7681.882Gadus_morhua
ENSOGAG00000016148SMARCA48296.706ENSGALG00000047145SMARCA410096.706Gallus_gallus
ENSOGAG00000016148SMARCA48887.881ENSGAFG00000014900smarca4a8787.107Gambusia_affinis
ENSOGAG00000016148SMARCA410080.870ENSGAFG00000008827-8880.870Gambusia_affinis
ENSOGAG00000016148SMARCA410080.318ENSGACG00000016033-7383.957Gasterosteus_aculeatus
ENSOGAG00000016148SMARCA49784.181ENSGACG00000006691smarca4a8983.277Gasterosteus_aculeatus
ENSOGAG00000016148SMARCA410095.568ENSGAGG00000016757SMARCA48995.107Gopherus_agassizii
ENSOGAG00000016148SMARCA410097.645ENSGGOG00000009882SMARCA48997.645Gorilla_gorilla
ENSOGAG00000016148SMARCA410086.671ENSHBUG00000021172smarca4a9085.580Haplochromis_burtoni
ENSOGAG00000016148SMARCA49589.072ENSHBUG00000005447-9184.495Haplochromis_burtoni
ENSOGAG00000016148SMARCA410097.032ENSHGLG00000010519SMARCA48997.032Heterocephalus_glaber_female
ENSOGAG00000016148SMARCA410095.649ENSHGLG00100013774SMARCA48995.649Heterocephalus_glaber_male
ENSOGAG00000016148SMARCA410084.657ENSHCOG00000009510smarca4a9184.918Hippocampus_comes
ENSOGAG00000016148SMARCA49784.037ENSIPUG00000016346-7288.879Ictalurus_punctatus
ENSOGAG00000016148SMARCA410086.558ENSIPUG00000006107smarca4a9086.490Ictalurus_punctatus
ENSOGAG00000016148SMARCA410097.507ENSSTOG00000007939SMARCA48997.507Ictidomys_tridecemlineatus
ENSOGAG00000016148SMARCA410095.325ENSJJAG00000012877Smarca48995.325Jaculus_jaculus
ENSOGAG00000016148SMARCA410085.606ENSKMAG00000019518-9285.724Kryptolebias_marmoratus
ENSOGAG00000016148SMARCA410085.339ENSKMAG00000011931smarca4a8985.675Kryptolebias_marmoratus
ENSOGAG00000016148SMARCA410071.271ENSLBEG00000020655-7377.135Labrus_bergylta
ENSOGAG00000016148SMARCA410085.065ENSLBEG00000017383smarca4a7288.214Labrus_bergylta
ENSOGAG00000016148SMARCA45888.571ENSLACG00000015309SMARCA410088.067Latimeria_chalumnae
ENSOGAG00000016148SMARCA410085.921ENSLOCG00000007820smarca4a6890.602Lepisosteus_oculatus
ENSOGAG00000016148SMARCA410097.512ENSLAFG00000001433SMARCA48997.512Loxodonta_africana
ENSOGAG00000016148SMARCA410097.645ENSMFAG00000032146SMARCA49194.762Macaca_fascicularis
ENSOGAG00000016148SMARCA410097.645ENSMMUG00000012042SMARCA48997.645Macaca_mulatta
ENSOGAG00000016148SMARCA410097.368ENSMNEG00000028512SMARCA48997.368Macaca_nemestrina
ENSOGAG00000016148SMARCA410097.576ENSMLEG00000034976SMARCA48997.374Mandrillus_leucophaeus
ENSOGAG00000016148SMARCA410085.487ENSMAMG00000009256smarca4a8986.119Mastacembelus_armatus
ENSOGAG00000016148SMARCA410084.738ENSMAMG00000002841-9285.093Mastacembelus_armatus
ENSOGAG00000016148SMARCA410086.404ENSMZEG00005003889smarca4a9086.073Maylandia_zebra
ENSOGAG00000016148SMARCA410084.149ENSMZEG00005023861-9084.088Maylandia_zebra
ENSOGAG00000016148SMARCA410096.821ENSMAUG00000020731Smarca48996.821Mesocricetus_auratus
ENSOGAG00000016148SMARCA410097.512ENSMICG00000009806SMARCA48997.512Microcebus_murinus
ENSOGAG00000016148SMARCA410096.821ENSMOCG00000022209Smarca48996.821Microtus_ochrogaster
ENSOGAG00000016148SMARCA410083.232ENSMMOG00000007571smarca4a9283.707Mola_mola
ENSOGAG00000016148SMARCA410079.765ENSMMOG00000008466-8881.661Mola_mola
ENSOGAG00000016148SMARCA410094.983ENSMODG00000006287SMARCA49094.983Monodelphis_domestica
ENSOGAG00000016148SMARCA49686.370ENSMALG00000003388smarca4a8986.088Monopterus_albus
ENSOGAG00000016148SMARCA410082.113ENSMALG00000021534-8388.908Monopterus_albus
ENSOGAG00000016148SMARCA410097.161MGP_CAROLIEiJ_G0031879Smarca410094.716Mus_caroli
ENSOGAG00000016148SMARCA410097.161ENSMUSG00000032187Smarca49994.716Mus_musculus
ENSOGAG00000016148SMARCA410096.745MGP_PahariEiJ_G0014745Smarca410094.243Mus_pahari
ENSOGAG00000016148SMARCA410097.161MGP_SPRETEiJ_G0033003Smarca410094.716Mus_spretus
ENSOGAG00000016148SMARCA410097.507ENSMPUG00000005711SMARCA48997.507Mustela_putorius_furo
ENSOGAG00000016148SMARCA410097.507ENSMLUG00000004491-8997.507Myotis_lucifugus
ENSOGAG00000016148SMARCA410096.330ENSNGAG00000021852Smarca48996.330Nannospalax_galili
ENSOGAG00000016148SMARCA49589.072ENSNBRG00000018865-9984.495Neolamprologus_brichardi
ENSOGAG00000016148SMARCA410084.552ENSNBRG00000011457smarca4a9084.425Neolamprologus_brichardi
ENSOGAG00000016148SMARCA49996.314ENSNLEG00000012389SMARCA49196.314Nomascus_leucogenys
ENSOGAG00000016148SMARCA49093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSOGAG00000016148SMARCA410093.677ENSODEG00000017127SMARCA48990.631Octodon_degus
ENSOGAG00000016148SMARCA410082.467ENSONIG00000018040-9081.903Oreochromis_niloticus
ENSOGAG00000016148SMARCA410086.326ENSONIG00000008196smarca4a8986.924Oreochromis_niloticus
ENSOGAG00000016148SMARCA410091.419ENSOCUG00000001787SMARCA49091.419Oryctolagus_cuniculus
ENSOGAG00000016148SMARCA410084.673ENSORLG00000015452smarca4a8984.490Oryzias_latipes
ENSOGAG00000016148SMARCA410077.961ENSORLG00000003955-9785.727Oryzias_latipes
ENSOGAG00000016148SMARCA410084.332ENSORLG00020004611smarca4a9882.305Oryzias_latipes_hni
ENSOGAG00000016148SMARCA49681.938ENSORLG00020009728-9785.912Oryzias_latipes_hni
ENSOGAG00000016148SMARCA410084.469ENSORLG00015016560smarca4a9884.854Oryzias_latipes_hsok
ENSOGAG00000016148SMARCA410081.595ENSORLG00015007739-9685.640Oryzias_latipes_hsok
ENSOGAG00000016148SMARCA49682.259ENSOMEG00000016626-9082.357Oryzias_melastigma
ENSOGAG00000016148SMARCA410085.003ENSOMEG00000007486smarca4a8985.705Oryzias_melastigma
ENSOGAG00000016148SMARCA410096.471ENSOARG00000017454SMARCA49096.471Ovis_aries
ENSOGAG00000016148SMARCA410097.645ENSPPAG00000043191SMARCA48997.645Pan_paniscus
ENSOGAG00000016148SMARCA410097.305ENSPPRG00000000064SMARCA48997.305Panthera_pardus
ENSOGAG00000016148SMARCA49297.585ENSPTIG00000017447SMARCA48397.585Panthera_tigris_altaica
ENSOGAG00000016148SMARCA410097.645ENSPTRG00000010488SMARCA48997.645Pan_troglodytes
ENSOGAG00000016148SMARCA410097.507ENSPANG00000011042SMARCA48897.507Papio_anubis
ENSOGAG00000016148SMARCA410085.231ENSPKIG00000010087-8885.895Paramormyrops_kingsleyae
ENSOGAG00000016148SMARCA410086.635ENSPKIG00000007770SMARCA48985.589Paramormyrops_kingsleyae
ENSOGAG00000016148SMARCA410088.904ENSPSIG00000005547SMARCA48988.701Pelodiscus_sinensis
ENSOGAG00000016148SMARCA410096.959ENSPEMG00000020389Smarca48996.959Peromyscus_maniculatus_bairdii
ENSOGAG00000016148SMARCA410096.884ENSPCIG00000017138SMARCA48996.884Phascolarctos_cinereus
ENSOGAG00000016148SMARCA410084.318ENSPFOG00000007892smarca4a8985.472Poecilia_formosa
ENSOGAG00000016148SMARCA410082.591ENSPFOG00000012930-9082.990Poecilia_formosa
ENSOGAG00000016148SMARCA410084.386ENSPLAG00000014294smarca4a8985.540Poecilia_latipinna
ENSOGAG00000016148SMARCA48189.483ENSPLAG00000018616-7289.983Poecilia_latipinna
ENSOGAG00000016148SMARCA410083.411ENSPMEG00000008929-9183.478Poecilia_mexicana
ENSOGAG00000016148SMARCA410084.386ENSPMEG00000003725smarca4a9185.540Poecilia_mexicana
ENSOGAG00000016148SMARCA410082.724ENSPREG00000014823-9183.056Poecilia_reticulata
ENSOGAG00000016148SMARCA410083.402ENSPREG00000014608smarca4a9085.193Poecilia_reticulata
ENSOGAG00000016148SMARCA410095.596ENSPPYG00000009568SMARCA48995.596Pongo_abelii
ENSOGAG00000016148SMARCA47886.182ENSPCAG00000014054SMARCA46886.182Procavia_capensis
ENSOGAG00000016148SMARCA410097.715ENSPCOG00000023011SMARCA48997.512Propithecus_coquereli
ENSOGAG00000016148SMARCA49597.936ENSPVAG00000007787SMARCA48597.936Pteropus_vampyrus
ENSOGAG00000016148SMARCA410085.510ENSPNYG00000000717smarca4a9186.268Pundamilia_nyererei
ENSOGAG00000016148SMARCA49589.072ENSPNYG00000023995-9184.495Pundamilia_nyererei
ENSOGAG00000016148SMARCA49488.539ENSPNAG00000024136smarca4a8884.483Pygocentrus_nattereri
ENSOGAG00000016148SMARCA410084.976ENSPNAG00000006636-9189.273Pygocentrus_nattereri
ENSOGAG00000016148SMARCA410097.230ENSRNOG00000009271Smarca48997.230Rattus_norvegicus
ENSOGAG00000016148SMARCA410097.507ENSRBIG00000038696SMARCA48897.507Rhinopithecus_bieti
ENSOGAG00000016148SMARCA410097.576ENSRROG00000045509SMARCA48997.576Rhinopithecus_roxellana
ENSOGAG00000016148SMARCA410097.645ENSSBOG00000026896SMARCA48997.645Saimiri_boliviensis_boliviensis
ENSOGAG00000016148SMARCA410096.745ENSSHAG00000001642SMARCA48996.745Sarcophilus_harrisii
ENSOGAG00000016148SMARCA49681.056ENSSFOG00015009921-8289.768Scleropages_formosus
ENSOGAG00000016148SMARCA410087.458ENSSFOG00015013823smarca48985.637Scleropages_formosus
ENSOGAG00000016148SMARCA410085.477ENSSMAG00000003200smarca4a9084.118Scophthalmus_maximus
ENSOGAG00000016148SMARCA410080.690ENSSMAG00000014082-7188.144Scophthalmus_maximus
ENSOGAG00000016148SMARCA410081.756ENSSDUG00000017298smarca4a8982.204Seriola_dumerili
ENSOGAG00000016148SMARCA410084.704ENSSDUG00000005388-9381.567Seriola_dumerili
ENSOGAG00000016148SMARCA410084.897ENSSLDG00000023663-9185.843Seriola_lalandi_dorsalis
ENSOGAG00000016148SMARCA410085.195ENSSLDG00000024486smarca4a9985.185Seriola_lalandi_dorsalis
ENSOGAG00000016148SMARCA462100.000ENSSARG00000013477SMARCA465100.000Sorex_araneus
ENSOGAG00000016148SMARCA410090.571ENSSPUG00000004558SMARCA49290.502Sphenodon_punctatus
ENSOGAG00000016148SMARCA410084.657ENSSPAG00000004248smarca4a9085.061Stegastes_partitus
ENSOGAG00000016148SMARCA410083.011ENSSPAG00000012533-9082.268Stegastes_partitus
ENSOGAG00000016148SMARCA410097.443ENSSSCG00000013629SMARCA48997.443Sus_scrofa
ENSOGAG00000016148SMARCA45595.970ENSTGUG00000015488-9495.970Taeniopygia_guttata
ENSOGAG00000016148SMARCA410080.068ENSTRUG00000004885smarca4a9980.272Takifugu_rubripes
ENSOGAG00000016148SMARCA410080.414ENSTRUG00000001378SMARCA49280.857Takifugu_rubripes
ENSOGAG00000016148SMARCA48083.554ENSTNIG00000004859-9784.257Tetraodon_nigroviridis
ENSOGAG00000016148SMARCA410082.822ENSTNIG00000004536SMARCA49083.719Tetraodon_nigroviridis
ENSOGAG00000016148SMARCA455100.000ENSTBEG00000000707-53100.000Tupaia_belangeri
ENSOGAG00000016148SMARCA410093.835ENSTTRG00000009519SMARCA49093.835Tursiops_truncatus
ENSOGAG00000016148SMARCA410097.576ENSUAMG00000014661SMARCA48997.576Ursus_americanus
ENSOGAG00000016148SMARCA410096.607ENSUMAG00000022005SMARCA48997.811Ursus_maritimus
ENSOGAG00000016148SMARCA410097.576ENSVVUG00000017820SMARCA48797.576Vulpes_vulpes
ENSOGAG00000016148SMARCA410085.840ENSXETG00000009355smarca49987.024Xenopus_tropicalis
ENSOGAG00000016148SMARCA49888.321ENSXCOG00000013494-8889.497Xiphophorus_couchianus
ENSOGAG00000016148SMARCA410085.266ENSXMAG00000006321smarca4a9983.986Xiphophorus_maculatus
ENSOGAG00000016148SMARCA410083.166ENSXMAG00000007030-9083.300Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us