EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000016196 (Gene tree)
Gene ID: 100944024
Gene Symbol: SF1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 15168 bases
Position: chrGL873659.1:1640287-1655454
Accession: 100944024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000014505	KH_1	PF00013.29	1.9e-07	1	1
ENSOGAP00000014505	zf-CCHC	PF00098.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000016203	SF1-201	2586	-	ENSOGAP00000014505	637 (aa)	XP_003798670	B5SNK8

Gene Model

Click here to download ENSOGAG00000016196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000016196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000016196	SF1	59	80.670	ENSAPOG00000012341	sf1	60	75.814	Acanthochromis_polyacanthus
ENSOGAG00000016196	SF1	99	91.757	ENSAMEG00000017828	SF1	100	92.535	Ailuropoda_melanoleuca
ENSOGAG00000016196	SF1	59	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSOGAG00000016196	SF1	59	80.155	ENSAOCG00000010934	sf1	61	75.814	Amphiprion_ocellaris
ENSOGAG00000016196	SF1	59	80.155	ENSAPEG00000009498	sf1	61	75.814	Amphiprion_percula
ENSOGAG00000016196	SF1	58	82.105	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSOGAG00000016196	SF1	100	99.687	ENSANAG00000026664	-	100	99.687	Aotus_nancymaae
ENSOGAG00000016196	SF1	87	88.108	ENSANAG00000022607	-	92	87.568	Aotus_nancymaae
ENSOGAG00000016196	SF1	57	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSOGAG00000016196	SF1	58	86.096	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSOGAG00000016196	SF1	94	99.499	ENSBTAG00000001035	SF1	94	99.499	Bos_taurus
ENSOGAG00000016196	SF1	100	99.843	ENSCJAG00000002780	SF1	100	99.843	Callithrix_jacchus
ENSOGAG00000016196	SF1	100	99.843	ENSCAFG00000014239	SF1	100	99.843	Canis_familiaris
ENSOGAG00000016196	SF1	100	99.843	ENSCAFG00020014381	SF1	100	99.843	Canis_lupus_dingo
ENSOGAG00000016196	SF1	94	99.499	ENSCHIG00000025867	SF1	97	99.622	Capra_hircus
ENSOGAG00000016196	SF1	98	79.014	ENSCAPG00000010762	SF1	100	79.014	Cavia_aperea
ENSOGAG00000016196	SF1	98	99.362	ENSCPOG00000012290	SF1	100	99.362	Cavia_porcellus
ENSOGAG00000016196	SF1	100	99.843	ENSCCAG00000037881	SF1	100	99.843	Cebus_capucinus
ENSOGAG00000016196	SF1	90	85.289	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSOGAG00000016196	SF1	100	99.843	ENSCATG00000011564	SF1	100	99.843	Cercocebus_atys
ENSOGAG00000016196	SF1	83	99.622	ENSCSAG00000007258	SF1	97	99.622	Chlorocebus_sabaeus
ENSOGAG00000016196	SF1	65	93.689	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSOGAG00000016196	SF1	81	86.486	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSOGAG00000016196	SF1	59	58.115	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSOGAG00000016196	SF1	90	47.746	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSOGAG00000016196	SF1	100	99.843	ENSCANG00000042201	SF1	100	99.843	Colobus_angolensis_palliatus
ENSOGAG00000016196	SF1	100	94.793	ENSCGRG00001003677	Sf1	100	94.793	Cricetulus_griseus_chok1gshd
ENSOGAG00000016196	SF1	82	97.905	ENSCGRG00000001708	Sf1	97	97.905	Cricetulus_griseus_crigri
ENSOGAG00000016196	SF1	62	78.571	ENSCSEG00000014375	sf1	57	75.837	Cynoglossus_semilaevis
ENSOGAG00000016196	SF1	58	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSOGAG00000016196	SF1	62	81.390	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSOGAG00000016196	SF1	84	97.948	ENSDNOG00000001282	SF1	98	97.948	Dasypus_novemcinctus
ENSOGAG00000016196	SF1	100	99.687	ENSDORG00000016334	Sf1	100	99.687	Dipodomys_ordii
ENSOGAG00000016196	SF1	87	92.252	ENSETEG00000012830	SF1	77	91.171	Echinops_telfairi
ENSOGAG00000016196	SF1	83	99.244	ENSEASG00005018272	SF1	97	99.244	Equus_asinus_asinus
ENSOGAG00000016196	SF1	83	99.433	ENSECAG00000024544	SF1	97	99.433	Equus_caballus
ENSOGAG00000016196	SF1	62	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSOGAG00000016196	SF1	58	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSOGAG00000016196	SF1	100	99.843	ENSFCAG00000012231	SF1	100	99.843	Felis_catus
ENSOGAG00000016196	SF1	98	92.006	ENSFDAG00000009833	SF1	99	90.439	Fukomys_damarensis
ENSOGAG00000016196	SF1	59	80.670	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSOGAG00000016196	SF1	52	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSOGAG00000016196	SF1	59	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSOGAG00000016196	SF1	71	89.011	ENSGAGG00000021691	SF1	72	85.135	Gopherus_agassizii
ENSOGAG00000016196	SF1	58	82.632	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSOGAG00000016196	SF1	100	99.687	ENSHGLG00000009541	SF1	100	99.687	Heterocephalus_glaber_female
ENSOGAG00000016196	SF1	95	85.382	ENSHGLG00100013879	-	99	88.206	Heterocephalus_glaber_male
ENSOGAG00000016196	SF1	72	86.765	ENSHGLG00100008255	-	94	86.345	Heterocephalus_glaber_male
ENSOGAG00000016196	SF1	68	89.195	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSOGAG00000016196	SF1	59	81.088	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSOGAG00000016196	SF1	73	96.667	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSOGAG00000016196	SF1	98	99.522	ENSSTOG00000009790	-	100	99.522	Ictidomys_tridecemlineatus
ENSOGAG00000016196	SF1	100	99.530	ENSJJAG00000011788	Sf1	100	99.530	Jaculus_jaculus
ENSOGAG00000016196	SF1	60	82.398	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSOGAG00000016196	SF1	58	82.461	ENSLBEG00000019836	sf1	52	86.053	Labrus_bergylta
ENSOGAG00000016196	SF1	58	85.294	ENSLOCG00000002130	sf1	59	79.803	Lepisosteus_oculatus
ENSOGAG00000016196	SF1	99	95.814	ENSLAFG00000007201	SF1	100	95.814	Loxodonta_africana
ENSOGAG00000016196	SF1	100	99.843	ENSMFAG00000033122	SF1	100	99.843	Macaca_fascicularis
ENSOGAG00000016196	SF1	100	99.843	ENSMMUG00000022606	SF1	100	99.843	Macaca_mulatta
ENSOGAG00000016196	SF1	100	96.049	ENSMNEG00000037901	SF1	100	96.049	Macaca_nemestrina
ENSOGAG00000016196	SF1	98	99.841	ENSMLEG00000040706	SF1	100	94.985	Mandrillus_leucophaeus
ENSOGAG00000016196	SF1	59	81.088	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSOGAG00000016196	SF1	58	82.368	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSOGAG00000016196	SF1	100	99.060	ENSMAUG00000014064	Sf1	100	99.060	Mesocricetus_auratus
ENSOGAG00000016196	SF1	100	99.843	ENSMICG00000001202	SF1	100	99.843	Microcebus_murinus
ENSOGAG00000016196	SF1	100	99.060	ENSMOCG00000022038	Sf1	100	99.060	Microtus_ochrogaster
ENSOGAG00000016196	SF1	58	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSOGAG00000016196	SF1	70	94.407	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSOGAG00000016196	SF1	100	99.060	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSOGAG00000016196	SF1	100	99.060	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSOGAG00000016196	SF1	100	98.746	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSOGAG00000016196	SF1	100	99.060	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSOGAG00000016196	SF1	93	99.323	ENSMPUG00000012684	SF1	92	99.323	Mustela_putorius_furo
ENSOGAG00000016196	SF1	93	99.154	ENSMLUG00000015217	-	92	99.154	Myotis_lucifugus
ENSOGAG00000016196	SF1	72	94.530	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSOGAG00000016196	SF1	100	99.530	ENSNGAG00000005550	Sf1	100	99.530	Nannospalax_galili
ENSOGAG00000016196	SF1	58	83.690	ENSNBRG00000017606	sf1	60	78.729	Neolamprologus_brichardi
ENSOGAG00000016196	SF1	100	99.687	ENSNLEG00000005236	-	100	99.687	Nomascus_leucogenys
ENSOGAG00000016196	SF1	81	98.246	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSOGAG00000016196	SF1	75	99.158	ENSOPRG00000005008	SF1	96	99.158	Ochotona_princeps
ENSOGAG00000016196	SF1	100	88.290	ENSODEG00000006102	-	100	86.287	Octodon_degus
ENSOGAG00000016196	SF1	58	82.632	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSOGAG00000016196	SF1	63	85.961	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSOGAG00000016196	SF1	99	99.683	ENSOCUG00000026486	SF1	100	99.683	Oryctolagus_cuniculus
ENSOGAG00000016196	SF1	60	80.307	ENSORLG00000011853	sf1	58	76.499	Oryzias_latipes
ENSOGAG00000016196	SF1	61	79.000	ENSORLG00020011834	sf1	60	75.352	Oryzias_latipes_hni
ENSOGAG00000016196	SF1	59	80.105	ENSORLG00015012855	sf1	59	76.259	Oryzias_latipes_hsok
ENSOGAG00000016196	SF1	60	79.795	ENSOMEG00000005210	sf1	61	76.056	Oryzias_melastigma
ENSOGAG00000016196	SF1	83	95.126	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSOGAG00000016196	SF1	99	96.203	ENSPPAG00000002799	-	100	96.203	Pan_paniscus
ENSOGAG00000016196	SF1	98	99.841	ENSPPRG00000013566	SF1	98	99.841	Panthera_pardus
ENSOGAG00000016196	SF1	70	98.876	ENSPTIG00000016141	SF1	80	98.876	Panthera_tigris_altaica
ENSOGAG00000016196	SF1	100	99.843	ENSPTRG00000003846	SF1	100	99.843	Pan_troglodytes
ENSOGAG00000016196	SF1	100	96.049	ENSPANG00000020754	SF1	97	99.622	Papio_anubis
ENSOGAG00000016196	SF1	51	79.880	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSOGAG00000016196	SF1	55	87.179	ENSPSIG00000003610	SF1	84	82.710	Pelodiscus_sinensis
ENSOGAG00000016196	SF1	100	99.216	ENSPEMG00000010463	Sf1	100	99.216	Peromyscus_maniculatus_bairdii
ENSOGAG00000016196	SF1	100	98.119	ENSPCIG00000018173	SF1	100	98.119	Phascolarctos_cinereus
ENSOGAG00000016196	SF1	58	83.862	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSOGAG00000016196	SF1	58	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSOGAG00000016196	SF1	58	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSOGAG00000016196	SF1	58	82.940	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSOGAG00000016196	SF1	100	99.687	ENSPPYG00000003098	-	100	99.687	Pongo_abelii
ENSOGAG00000016196	SF1	83	97.909	ENSPCAG00000013631	SF1	78	97.909	Procavia_capensis
ENSOGAG00000016196	SF1	100	100.000	ENSPCOG00000027546	SF1	100	100.000	Propithecus_coquereli
ENSOGAG00000016196	SF1	83	97.909	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSOGAG00000016196	SF1	58	82.368	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSOGAG00000016196	SF1	58	85.450	ENSPNAG00000013072	sf1	59	78.606	Pygocentrus_nattereri
ENSOGAG00000016196	SF1	94	98.831	ENSRNOG00000021085	Sf1	94	98.831	Rattus_norvegicus
ENSOGAG00000016196	SF1	100	95.768	ENSRBIG00000042818	SF1	100	95.768	Rhinopithecus_bieti
ENSOGAG00000016196	SF1	100	86.604	ENSRROG00000045655	SF1	98	98.431	Rhinopithecus_roxellana
ENSOGAG00000016196	SF1	89	80.035	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSOGAG00000016196	SF1	64	91.951	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSOGAG00000016196	SF1	62	80.299	ENSSFOG00015021978	sf1	55	76.812	Scleropages_formosus
ENSOGAG00000016196	SF1	64	76.112	ENSSMAG00000007549	sf1	63	76.291	Scophthalmus_maximus
ENSOGAG00000016196	SF1	81	95.745	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSOGAG00000016196	SF1	79	82.759	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSOGAG00000016196	SF1	59	80.155	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSOGAG00000016196	SF1	100	99.530	ENSSSCG00000013021	SF1	100	99.530	Sus_scrofa
ENSOGAG00000016196	SF1	84	62.799	ENSTNIG00000004820	sf1	80	69.789	Tetraodon_nigroviridis
ENSOGAG00000016196	SF1	72	92.576	ENSTBEG00000013133	SF1	66	92.544	Tupaia_belangeri
ENSOGAG00000016196	SF1	81	95.174	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSOGAG00000016196	SF1	71	96.674	ENSUAMG00000011977	SF1	86	96.674	Ursus_americanus
ENSOGAG00000016196	SF1	78	98.879	ENSUMAG00000007268	SF1	90	98.864	Ursus_maritimus
ENSOGAG00000016196	SF1	56	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSOGAG00000016196	SF1	83	99.622	ENSVVUG00000028585	SF1	97	99.622	Vulpes_vulpes
ENSOGAG00000016196	SF1	88	69.391	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSOGAG00000016196	SF1	57	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSOGAG00000016196	SF1	58	83.377	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus