EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000016259 (Gene tree)
Gene ID: 100959735
Gene Symbol: EXOSC1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 11619 bases
Position: chrGL873540.1:23076127-23087745
Accession: 100959735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000014555	EXOSC1	PF10447.9	3.8e-15	1	1
ENSOGAP00000014555	ECR1_N	PF14382.6	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000016265	EXOSC1-201	602	-	ENSOGAP00000014555	195 (aa)	XP_003787345	H0XEZ6

Gene Model

Click here to download ENSOGAG00000016259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000016259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000016259	EXOSC1	100	96.410	ENSG00000171311	EXOSC1	100	96.410	Homo_sapiens
ENSOGAG00000016259	EXOSC1	98	79.581	ENSAPOG00000007822	exosc1	98	79.581	Acanthochromis_polyacanthus
ENSOGAG00000016259	EXOSC1	100	97.949	ENSAMEG00000000129	EXOSC1	100	97.949	Ailuropoda_melanoleuca
ENSOGAG00000016259	EXOSC1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSOGAG00000016259	EXOSC1	98	79.581	ENSAOCG00000010699	exosc1	98	79.581	Amphiprion_ocellaris
ENSOGAG00000016259	EXOSC1	92	70.391	ENSAPEG00000012690	exosc1	96	70.391	Amphiprion_percula
ENSOGAG00000016259	EXOSC1	98	79.058	ENSATEG00000018683	exosc1	98	79.058	Anabas_testudineus
ENSOGAG00000016259	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSOGAG00000016259	EXOSC1	100	97.949	ENSANAG00000034669	EXOSC1	100	97.949	Aotus_nancymaae
ENSOGAG00000016259	EXOSC1	98	79.581	ENSACLG00000021243	exosc1	98	79.581	Astatotilapia_calliptera
ENSOGAG00000016259	EXOSC1	98	81.152	ENSAMXG00000011116	exosc1	98	81.152	Astyanax_mexicanus
ENSOGAG00000016259	EXOSC1	100	98.462	ENSBTAG00000012699	EXOSC1	100	98.462	Bos_taurus
ENSOGAG00000016259	EXOSC1	92	33.511	WBGene00012966	exos-1	90	33.511	Caenorhabditis_elegans
ENSOGAG00000016259	EXOSC1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSOGAG00000016259	EXOSC1	100	97.436	ENSCAFG00000009068	EXOSC1	94	97.436	Canis_familiaris
ENSOGAG00000016259	EXOSC1	100	97.436	ENSCAFG00020006002	EXOSC1	94	97.436	Canis_lupus_dingo
ENSOGAG00000016259	EXOSC1	100	98.462	ENSCHIG00000015253	EXOSC1	100	98.462	Capra_hircus
ENSOGAG00000016259	EXOSC1	100	96.923	ENSTSYG00000000760	EXOSC1	100	96.923	Carlito_syrichta
ENSOGAG00000016259	EXOSC1	100	97.949	ENSCPOG00000001173	EXOSC1	100	97.949	Cavia_porcellus
ENSOGAG00000016259	EXOSC1	100	55.838	ENSCCAG00000023986	EXOSC1	100	55.838	Cebus_capucinus
ENSOGAG00000016259	EXOSC1	100	96.410	ENSCATG00000034114	EXOSC1	100	96.410	Cercocebus_atys
ENSOGAG00000016259	EXOSC1	100	98.462	ENSCLAG00000002463	EXOSC1	100	98.462	Chinchilla_lanigera
ENSOGAG00000016259	EXOSC1	100	96.923	ENSCSAG00000005870	EXOSC1	100	96.923	Chlorocebus_sabaeus
ENSOGAG00000016259	EXOSC1	96	82.888	ENSCHOG00000006477	EXOSC1	100	82.888	Choloepus_hoffmanni
ENSOGAG00000016259	EXOSC1	54	83.019	ENSCPBG00000011949	EXOSC1	88	83.019	Chrysemys_picta_bellii
ENSOGAG00000016259	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSOGAG00000016259	EXOSC1	95	57.754	ENSCSAVG00000010865	-	95	57.754	Ciona_savignyi
ENSOGAG00000016259	EXOSC1	100	96.410	ENSCANG00000034159	EXOSC1	100	96.410	Colobus_angolensis_palliatus
ENSOGAG00000016259	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSOGAG00000016259	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSOGAG00000016259	EXOSC1	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSOGAG00000016259	EXOSC1	98	75.916	ENSCVAG00000016748	exosc1	98	75.916	Cyprinodon_variegatus
ENSOGAG00000016259	EXOSC1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSOGAG00000016259	EXOSC1	75	98.649	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSOGAG00000016259	EXOSC1	100	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSOGAG00000016259	EXOSC1	94	49.206	FBgn0032346	Csl4	92	49.206	Drosophila_melanogaster
ENSOGAG00000016259	EXOSC1	100	94.872	ENSETEG00000002469	-	100	94.872	Echinops_telfairi
ENSOGAG00000016259	EXOSC1	99	61.735	ENSEBUG00000008164	exosc1	98	61.735	Eptatretus_burgeri
ENSOGAG00000016259	EXOSC1	100	87.179	ENSEASG00005008684	EXOSC1	100	87.179	Equus_asinus_asinus
ENSOGAG00000016259	EXOSC1	61	78.151	ENSECAG00000010621	EXOSC1	71	78.151	Equus_caballus
ENSOGAG00000016259	EXOSC1	100	96.923	ENSEEUG00000005647	EXOSC1	100	96.923	Erinaceus_europaeus
ENSOGAG00000016259	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	81	80.435	Esox_lucius
ENSOGAG00000016259	EXOSC1	100	97.949	ENSFCAG00000040563	EXOSC1	94	97.949	Felis_catus
ENSOGAG00000016259	EXOSC1	100	82.564	ENSFALG00000008450	EXOSC1	100	82.564	Ficedula_albicollis
ENSOGAG00000016259	EXOSC1	100	97.949	ENSFDAG00000000846	EXOSC1	100	97.949	Fukomys_damarensis
ENSOGAG00000016259	EXOSC1	98	75.916	ENSFHEG00000009154	exosc1	98	75.916	Fundulus_heteroclitus
ENSOGAG00000016259	EXOSC1	98	79.058	ENSGMOG00000008993	exosc1	98	79.058	Gadus_morhua
ENSOGAG00000016259	EXOSC1	100	71.795	ENSGALG00000039917	EXOSC1	100	85.616	Gallus_gallus
ENSOGAG00000016259	EXOSC1	98	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSOGAG00000016259	EXOSC1	98	79.581	ENSGACG00000018936	exosc1	98	79.581	Gasterosteus_aculeatus
ENSOGAG00000016259	EXOSC1	100	85.128	ENSGAGG00000019192	EXOSC1	100	85.128	Gopherus_agassizii
ENSOGAG00000016259	EXOSC1	100	84.103	ENSGGOG00000003099	EXOSC1	100	84.103	Gorilla_gorilla
ENSOGAG00000016259	EXOSC1	98	79.581	ENSHBUG00000017857	exosc1	98	79.581	Haplochromis_burtoni
ENSOGAG00000016259	EXOSC1	100	97.436	ENSHGLG00000016927	EXOSC1	100	97.436	Heterocephalus_glaber_female
ENSOGAG00000016259	EXOSC1	100	97.436	ENSHGLG00100012208	EXOSC1	100	97.436	Heterocephalus_glaber_male
ENSOGAG00000016259	EXOSC1	98	78.534	ENSHCOG00000019882	exosc1	98	78.534	Hippocampus_comes
ENSOGAG00000016259	EXOSC1	98	80.105	ENSIPUG00000007685	exosc1	98	80.105	Ictalurus_punctatus
ENSOGAG00000016259	EXOSC1	100	97.949	ENSSTOG00000006615	EXOSC1	100	97.949	Ictidomys_tridecemlineatus
ENSOGAG00000016259	EXOSC1	63	83.607	ENSSTOG00000029860	-	93	83.607	Ictidomys_tridecemlineatus
ENSOGAG00000016259	EXOSC1	100	97.949	ENSJJAG00000013311	Exosc1	100	97.949	Jaculus_jaculus
ENSOGAG00000016259	EXOSC1	98	77.604	ENSKMAG00000001202	exosc1	81	77.604	Kryptolebias_marmoratus
ENSOGAG00000016259	EXOSC1	98	79.058	ENSLBEG00000011448	exosc1	98	79.058	Labrus_bergylta
ENSOGAG00000016259	EXOSC1	98	58.586	ENSLOCG00000003776	exosc1	99	58.586	Lepisosteus_oculatus
ENSOGAG00000016259	EXOSC1	100	96.923	ENSLAFG00000015983	EXOSC1	100	96.923	Loxodonta_africana
ENSOGAG00000016259	EXOSC1	100	96.410	ENSMFAG00000001493	EXOSC1	100	96.410	Macaca_fascicularis
ENSOGAG00000016259	EXOSC1	100	96.410	ENSMMUG00000020028	EXOSC1	100	89.447	Macaca_mulatta
ENSOGAG00000016259	EXOSC1	100	96.410	ENSMNEG00000029816	EXOSC1	100	96.410	Macaca_nemestrina
ENSOGAG00000016259	EXOSC1	100	90.769	ENSMLEG00000027643	EXOSC1	100	90.769	Mandrillus_leucophaeus
ENSOGAG00000016259	EXOSC1	98	80.105	ENSMAMG00000012200	exosc1	98	80.105	Mastacembelus_armatus
ENSOGAG00000016259	EXOSC1	98	79.581	ENSMZEG00005007042	exosc1	98	79.581	Maylandia_zebra
ENSOGAG00000016259	EXOSC1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSOGAG00000016259	EXOSC1	100	98.462	ENSMICG00000007664	EXOSC1	92	98.462	Microcebus_murinus
ENSOGAG00000016259	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSOGAG00000016259	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSOGAG00000016259	EXOSC1	99	59.794	ENSMMOG00000021403	exosc1	99	59.794	Mola_mola
ENSOGAG00000016259	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSOGAG00000016259	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSOGAG00000016259	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSOGAG00000016259	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSOGAG00000016259	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSOGAG00000016259	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSOGAG00000016259	EXOSC1	100	97.949	ENSMPUG00000017044	EXOSC1	100	97.949	Mustela_putorius_furo
ENSOGAG00000016259	EXOSC1	100	97.436	ENSMLUG00000009228	EXOSC1	100	97.436	Myotis_lucifugus
ENSOGAG00000016259	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSOGAG00000016259	EXOSC1	98	60.209	ENSNBRG00000024007	exosc1	97	60.209	Neolamprologus_brichardi
ENSOGAG00000016259	EXOSC1	100	95.897	ENSNLEG00000013872	EXOSC1	100	95.897	Nomascus_leucogenys
ENSOGAG00000016259	EXOSC1	59	92.174	ENSMEUG00000002246	EXOSC1	100	92.174	Notamacropus_eugenii
ENSOGAG00000016259	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSOGAG00000016259	EXOSC1	100	97.949	ENSODEG00000016709	EXOSC1	100	97.949	Octodon_degus
ENSOGAG00000016259	EXOSC1	98	79.581	ENSONIG00000017683	exosc1	98	79.581	Oreochromis_niloticus
ENSOGAG00000016259	EXOSC1	59	94.783	ENSOANG00000006563	EXOSC1	98	92.742	Ornithorhynchus_anatinus
ENSOGAG00000016259	EXOSC1	100	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSOGAG00000016259	EXOSC1	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSOGAG00000016259	EXOSC1	98	77.604	ENSORLG00000011595	exosc1	98	77.604	Oryzias_latipes
ENSOGAG00000016259	EXOSC1	98	77.604	ENSORLG00020005831	exosc1	98	77.604	Oryzias_latipes_hni
ENSOGAG00000016259	EXOSC1	98	77.604	ENSORLG00015004317	exosc1	98	77.604	Oryzias_latipes_hsok
ENSOGAG00000016259	EXOSC1	98	62.304	ENSOMEG00000013907	exosc1	98	62.304	Oryzias_melastigma
ENSOGAG00000016259	EXOSC1	100	97.949	ENSOARG00000010136	EXOSC1	100	97.949	Ovis_aries
ENSOGAG00000016259	EXOSC1	100	90.355	ENSPPAG00000039842	EXOSC1	100	90.355	Pan_paniscus
ENSOGAG00000016259	EXOSC1	100	97.949	ENSPPRG00000023366	EXOSC1	100	97.949	Panthera_pardus
ENSOGAG00000016259	EXOSC1	100	97.949	ENSPTIG00000017701	EXOSC1	100	97.949	Panthera_tigris_altaica
ENSOGAG00000016259	EXOSC1	100	96.410	ENSPTRG00000002808	EXOSC1	100	96.410	Pan_troglodytes
ENSOGAG00000016259	EXOSC1	100	96.410	ENSPANG00000021324	EXOSC1	100	96.410	Papio_anubis
ENSOGAG00000016259	EXOSC1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSOGAG00000016259	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	80.328	Pelodiscus_sinensis
ENSOGAG00000016259	EXOSC1	98	67.539	ENSPMGG00000014002	exosc1	98	67.539	Periophthalmus_magnuspinnatus
ENSOGAG00000016259	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSOGAG00000016259	EXOSC1	95	71.658	ENSPMAG00000000195	exosc1	95	71.658	Petromyzon_marinus
ENSOGAG00000016259	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSOGAG00000016259	EXOSC1	98	75.393	ENSPFOG00000006755	exosc1	94	75.393	Poecilia_formosa
ENSOGAG00000016259	EXOSC1	98	75.393	ENSPLAG00000005880	exosc1	98	75.393	Poecilia_latipinna
ENSOGAG00000016259	EXOSC1	98	75.393	ENSPMEG00000015598	exosc1	94	75.393	Poecilia_mexicana
ENSOGAG00000016259	EXOSC1	98	65.625	ENSPREG00000000405	exosc1	93	65.625	Poecilia_reticulata
ENSOGAG00000016259	EXOSC1	100	95.897	ENSPPYG00000002531	EXOSC1	100	95.897	Pongo_abelii
ENSOGAG00000016259	EXOSC1	100	96.923	ENSPCAG00000009135	EXOSC1	100	96.923	Procavia_capensis
ENSOGAG00000016259	EXOSC1	100	92.308	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSOGAG00000016259	EXOSC1	100	97.949	ENSPVAG00000003372	EXOSC1	100	97.949	Pteropus_vampyrus
ENSOGAG00000016259	EXOSC1	98	79.581	ENSPNYG00000021745	exosc1	98	79.581	Pundamilia_nyererei
ENSOGAG00000016259	EXOSC1	98	80.105	ENSPNAG00000001944	exosc1	98	80.105	Pygocentrus_nattereri
ENSOGAG00000016259	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSOGAG00000016259	EXOSC1	100	96.410	ENSRBIG00000035618	EXOSC1	100	96.410	Rhinopithecus_bieti
ENSOGAG00000016259	EXOSC1	100	96.410	ENSRROG00000032589	EXOSC1	92	96.410	Rhinopithecus_roxellana
ENSOGAG00000016259	EXOSC1	100	97.949	ENSSBOG00000000359	EXOSC1	100	97.949	Saimiri_boliviensis_boliviensis
ENSOGAG00000016259	EXOSC1	75	95.238	ENSSHAG00000018219	EXOSC1	100	95.238	Sarcophilus_harrisii
ENSOGAG00000016259	EXOSC1	97	77.895	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSOGAG00000016259	EXOSC1	98	82.199	ENSSFOG00015009069	exosc1	98	82.199	Scleropages_formosus
ENSOGAG00000016259	EXOSC1	98	80.105	ENSSMAG00000003721	exosc1	98	80.105	Scophthalmus_maximus
ENSOGAG00000016259	EXOSC1	98	79.581	ENSSDUG00000002993	exosc1	98	79.581	Seriola_dumerili
ENSOGAG00000016259	EXOSC1	98	79.581	ENSSLDG00000025181	exosc1	98	79.581	Seriola_lalandi_dorsalis
ENSOGAG00000016259	EXOSC1	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSOGAG00000016259	EXOSC1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSOGAG00000016259	EXOSC1	98	71.204	ENSSPAG00000016792	exosc1	82	71.204	Stegastes_partitus
ENSOGAG00000016259	EXOSC1	100	96.923	ENSSSCG00000010518	EXOSC1	91	96.923	Sus_scrofa
ENSOGAG00000016259	EXOSC1	98	80.729	ENSTGUG00000009692	EXOSC1	99	80.729	Taeniopygia_guttata
ENSOGAG00000016259	EXOSC1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSOGAG00000016259	EXOSC1	97	73.438	ENSTNIG00000014079	exosc1	97	73.438	Tetraodon_nigroviridis
ENSOGAG00000016259	EXOSC1	100	88.718	ENSTBEG00000006011	EXOSC1	100	88.718	Tupaia_belangeri
ENSOGAG00000016259	EXOSC1	94	97.283	ENSTTRG00000009887	EXOSC1	100	97.283	Tursiops_truncatus
ENSOGAG00000016259	EXOSC1	100	81.026	ENSUAMG00000010266	EXOSC1	100	81.026	Ursus_americanus
ENSOGAG00000016259	EXOSC1	100	81.026	ENSUMAG00000022002	EXOSC1	100	81.026	Ursus_maritimus
ENSOGAG00000016259	EXOSC1	100	97.436	ENSVVUG00000023192	EXOSC1	63	97.436	Vulpes_vulpes
ENSOGAG00000016259	EXOSC1	98	78.646	ENSXETG00000003434	exosc1	99	78.646	Xenopus_tropicalis
ENSOGAG00000016259	EXOSC1	62	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSOGAG00000016259	EXOSC1	98	66.146	ENSXMAG00000023382	exosc1	93	66.146	Xiphophorus_maculatus