EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000025535 (Gene tree)
Gene ID: 100950105
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 177246 bases
Position: chrGL873563.1:13704125-13881370
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000018155	Fox-1_C	PF12414.8	7.6e-43	1	1
ENSOGAP00000018155	RRM_1	PF00076.22	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000031588	RBFOX1-201	1584	-	ENSOGAP00000018155	397 (aa)	-	H0XPW4

Gene Model

Click here to download ENSOGAG00000025535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000025535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000025535	RBFOX1	98	63.171	ENSOGAG00000033250	RBFOX2	100	62.228
ENSOGAG00000025535	RBFOX1	99	65.664	ENSOGAG00000029595	RBFOX3	99	64.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000025535	RBFOX1	100	97.985	ENSG00000078328	RBFOX1	100	97.985	Homo_sapiens
ENSOGAG00000025535	RBFOX1	100	74.217	ENSAPOG00000003197	rbfox1	100	74.699	Acanthochromis_polyacanthus
ENSOGAG00000025535	RBFOX1	56	95.067	ENSAMEG00000008605	RBFOX1	89	95.067	Ailuropoda_melanoleuca
ENSOGAG00000025535	RBFOX1	67	64.527	ENSACIG00000005478	rbfox1	68	64.527	Amphilophus_citrinellus
ENSOGAG00000025535	RBFOX1	73	70.684	ENSAOCG00000008283	rbfox1	96	70.358	Amphiprion_ocellaris
ENSOGAG00000025535	RBFOX1	95	71.164	ENSAPEG00000010636	rbfox1	100	71.053	Amphiprion_percula
ENSOGAG00000025535	RBFOX1	75	68.038	ENSATEG00000007513	rbfox1	98	67.722	Anabas_testudineus
ENSOGAG00000025535	RBFOX1	98	94.344	ENSAPLG00000013263	RBFOX1	97	94.344	Anas_platyrhynchos
ENSOGAG00000025535	RBFOX1	99	87.121	ENSACAG00000004013	RBFOX1	99	87.121	Anolis_carolinensis
ENSOGAG00000025535	RBFOX1	99	96.447	ENSANAG00000029527	RBFOX1	99	96.447	Aotus_nancymaae
ENSOGAG00000025535	RBFOX1	56	87.444	ENSAMXG00000002431	rbfox1	71	79.283	Astyanax_mexicanus
ENSOGAG00000025535	RBFOX1	99	95.431	ENSBTAG00000007210	RBFOX1	99	95.431	Bos_taurus
ENSOGAG00000025535	RBFOX1	98	98.462	ENSCJAG00000017351	RBFOX1	94	98.462	Callithrix_jacchus
ENSOGAG00000025535	RBFOX1	98	96.419	ENSCAFG00000019082	RBFOX1	94	96.419	Canis_familiaris
ENSOGAG00000025535	RBFOX1	68	98.513	ENSCAFG00020024881	RBFOX1	75	98.513	Canis_lupus_dingo
ENSOGAG00000025535	RBFOX1	99	95.431	ENSCHIG00000023549	RBFOX1	99	95.431	Capra_hircus
ENSOGAG00000025535	RBFOX1	98	97.172	ENSTSYG00000005334	RBFOX1	100	97.172	Carlito_syrichta
ENSOGAG00000025535	RBFOX1	98	98.196	ENSCAPG00000017669	RBFOX1	100	98.196	Cavia_aperea
ENSOGAG00000025535	RBFOX1	100	96.474	ENSCPOG00000011314	RBFOX1	100	97.449	Cavia_porcellus
ENSOGAG00000025535	RBFOX1	98	96.931	ENSCCAG00000023031	RBFOX1	94	96.931	Cebus_capucinus
ENSOGAG00000025535	RBFOX1	98	97.187	ENSCATG00000033816	RBFOX1	94	97.187	Cercocebus_atys
ENSOGAG00000025535	RBFOX1	99	97.964	ENSCLAG00000012761	RBFOX1	99	97.964	Chinchilla_lanigera
ENSOGAG00000025535	RBFOX1	84	96.716	ENSCSAG00000008739	RBFOX1	89	96.716	Chlorocebus_sabaeus
ENSOGAG00000025535	RBFOX1	98	73.590	ENSCHOG00000012843	RBFOX1	93	73.590	Choloepus_hoffmanni
ENSOGAG00000025535	RBFOX1	98	94.588	ENSCPBG00000026626	RBFOX1	99	91.624	Chrysemys_picta_bellii
ENSOGAG00000025535	RBFOX1	98	97.187	ENSCANG00000033125	RBFOX1	94	97.187	Colobus_angolensis_palliatus
ENSOGAG00000025535	RBFOX1	100	96.222	ENSCGRG00001013729	Rbfox1	100	96.222	Cricetulus_griseus_chok1gshd
ENSOGAG00000025535	RBFOX1	100	96.222	ENSCGRG00000003272	Rbfox1	100	96.222	Cricetulus_griseus_crigri
ENSOGAG00000025535	RBFOX1	95	71.033	ENSCSEG00000008840	rbfox1	100	71.033	Cynoglossus_semilaevis
ENSOGAG00000025535	RBFOX1	99	80.759	ENSDARG00000014746	rbfox1	100	86.829	Danio_rerio
ENSOGAG00000025535	RBFOX1	99	97.959	ENSDNOG00000043612	RBFOX1	94	97.959	Dasypus_novemcinctus
ENSOGAG00000025535	RBFOX1	99	95.443	ENSDORG00000010024	Rbfox1	98	95.443	Dipodomys_ordii
ENSOGAG00000025535	RBFOX1	98	75.192	ENSETEG00000003771	RBFOX1	94	75.192	Echinops_telfairi
ENSOGAG00000025535	RBFOX1	98	98.972	ENSEASG00005011599	RBFOX1	99	96.193	Equus_asinus_asinus
ENSOGAG00000025535	RBFOX1	98	96.667	ENSECAG00000012667	RBFOX1	91	96.296	Equus_caballus
ENSOGAG00000025535	RBFOX1	98	50.765	ENSELUG00000013096	rbfox1	98	50.510	Esox_lucius
ENSOGAG00000025535	RBFOX1	98	98.458	ENSFCAG00000025322	RBFOX1	89	98.458	Felis_catus
ENSOGAG00000025535	RBFOX1	81	94.427	ENSFALG00000004027	RBFOX1	97	94.427	Ficedula_albicollis
ENSOGAG00000025535	RBFOX1	100	96.977	ENSFDAG00000007388	RBFOX1	100	96.977	Fukomys_damarensis
ENSOGAG00000025535	RBFOX1	98	91.304	ENSGALG00000034325	RBFOX1	94	91.304	Gallus_gallus
ENSOGAG00000025535	RBFOX1	95	94.695	ENSGAGG00000023681	RBFOX1	100	94.695	Gopherus_agassizii
ENSOGAG00000025535	RBFOX1	98	97.187	ENSGGOG00000016871	-	99	94.643	Gorilla_gorilla
ENSOGAG00000025535	RBFOX1	100	96.725	ENSHGLG00000016944	RBFOX1	100	96.725	Heterocephalus_glaber_female
ENSOGAG00000025535	RBFOX1	100	96.725	ENSHGLG00100003272	RBFOX1	100	96.725	Heterocephalus_glaber_male
ENSOGAG00000025535	RBFOX1	85	70.317	ENSHCOG00000016419	rbfox1	91	70.317	Hippocampus_comes
ENSOGAG00000025535	RBFOX1	95	83.820	ENSIPUG00000015215	rbfox1	100	83.820	Ictalurus_punctatus
ENSOGAG00000025535	RBFOX1	100	96.222	ENSSTOG00000000322	RBFOX1	100	96.222	Ictidomys_tridecemlineatus
ENSOGAG00000025535	RBFOX1	100	93.199	ENSJJAG00000002575	Rbfox1	100	93.199	Jaculus_jaculus
ENSOGAG00000025535	RBFOX1	99	72.818	ENSLBEG00000014659	rbfox1	99	72.569	Labrus_bergylta
ENSOGAG00000025535	RBFOX1	98	87.023	ENSLOCG00000006675	rbfox1	99	87.023	Lepisosteus_oculatus
ENSOGAG00000025535	RBFOX1	77	99.026	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSOGAG00000025535	RBFOX1	98	96.931	ENSMFAG00000036447	RBFOX1	97	94.388	Macaca_fascicularis
ENSOGAG00000025535	RBFOX1	97	99.479	ENSMMUG00000003458	RBFOX1	97	99.479	Macaca_mulatta
ENSOGAG00000025535	RBFOX1	98	96.931	ENSMNEG00000032034	RBFOX1	94	96.931	Macaca_nemestrina
ENSOGAG00000025535	RBFOX1	98	97.187	ENSMLEG00000015382	RBFOX1	94	97.187	Mandrillus_leucophaeus
ENSOGAG00000025535	RBFOX1	95	74.745	ENSMAMG00000003142	rbfox1	100	75.255	Mastacembelus_armatus
ENSOGAG00000025535	RBFOX1	73	87.500	ENSMGAG00000008606	RBFOX1	96	87.279	Meleagris_gallopavo
ENSOGAG00000025535	RBFOX1	97	58.073	ENSMAUG00000020570	Rbfox1	96	57.031	Mesocricetus_auratus
ENSOGAG00000025535	RBFOX1	98	92.051	ENSMICG00000034286	RBFOX1	97	92.051	Microcebus_murinus
ENSOGAG00000025535	RBFOX1	100	96.222	ENSMOCG00000020932	Rbfox1	100	97.917	Microtus_ochrogaster
ENSOGAG00000025535	RBFOX1	86	70.725	ENSMMOG00000009716	rbfox1	86	71.091	Mola_mola
ENSOGAG00000025535	RBFOX1	80	95.298	ENSMODG00000005826	RBFOX1	90	95.298	Monodelphis_domestica
ENSOGAG00000025535	RBFOX1	100	74.817	ENSMALG00000003337	rbfox1	100	74.817	Monopterus_albus
ENSOGAG00000025535	RBFOX1	100	96.474	MGP_CAROLIEiJ_G0020427	Rbfox1	100	96.474	Mus_caroli
ENSOGAG00000025535	RBFOX1	100	96.222	ENSMUSG00000008658	Rbfox1	100	96.222	Mus_musculus
ENSOGAG00000025535	RBFOX1	100	96.474	MGP_PahariEiJ_G0016135	Rbfox1	100	96.474	Mus_pahari
ENSOGAG00000025535	RBFOX1	100	95.970	MGP_SPRETEiJ_G0021321	Rbfox1	100	95.970	Mus_spretus
ENSOGAG00000025535	RBFOX1	84	96.687	ENSMPUG00000014822	RBFOX1	84	96.687	Mustela_putorius_furo
ENSOGAG00000025535	RBFOX1	77	99.674	ENSMLUG00000015896	RBFOX1	100	99.674	Myotis_lucifugus
ENSOGAG00000025535	RBFOX1	98	98.454	ENSNGAG00000023276	Rbfox1	100	98.454	Nannospalax_galili
ENSOGAG00000025535	RBFOX1	99	60.143	ENSNBRG00000011084	rbfox1	95	60.143	Neolamprologus_brichardi
ENSOGAG00000025535	RBFOX1	98	96.931	ENSNLEG00000010017	-	94	96.931	Nomascus_leucogenys
ENSOGAG00000025535	RBFOX1	98	78.005	ENSMEUG00000012525	RBFOX1	94	78.005	Notamacropus_eugenii
ENSOGAG00000025535	RBFOX1	98	76.982	ENSOPRG00000006199	-	94	76.982	Ochotona_princeps
ENSOGAG00000025535	RBFOX1	100	96.222	ENSODEG00000013166	RBFOX1	100	96.465	Octodon_degus
ENSOGAG00000025535	RBFOX1	84	93.134	ENSOANG00000002379	RBFOX1	89	93.134	Ornithorhynchus_anatinus
ENSOGAG00000025535	RBFOX1	55	96.789	ENSOCUG00000001205	-	97	96.789	Oryctolagus_cuniculus
ENSOGAG00000025535	RBFOX1	62	86.939	ENSOARG00000005135	RBFOX1	97	86.939	Ovis_aries
ENSOGAG00000025535	RBFOX1	98	99.742	ENSPPAG00000036238	-	100	99.742	Pan_paniscus
ENSOGAG00000025535	RBFOX1	98	96.164	ENSPPRG00000006546	RBFOX1	94	96.164	Panthera_pardus
ENSOGAG00000025535	RBFOX1	98	87.371	ENSPTIG00000021154	RBFOX1	99	86.375	Panthera_tigris_altaica
ENSOGAG00000025535	RBFOX1	98	97.187	ENSPTRG00000007744	RBFOX1	99	94.643	Pan_troglodytes
ENSOGAG00000025535	RBFOX1	98	97.187	ENSPANG00000026500	RBFOX1	94	97.187	Papio_anubis
ENSOGAG00000025535	RBFOX1	75	82.432	ENSPKIG00000019353	rbfox1	88	82.432	Paramormyrops_kingsleyae
ENSOGAG00000025535	RBFOX1	100	81.454	ENSPKIG00000009667	-	95	83.424	Paramormyrops_kingsleyae
ENSOGAG00000025535	RBFOX1	99	93.639	ENSPSIG00000006523	RBFOX1	98	93.639	Pelodiscus_sinensis
ENSOGAG00000025535	RBFOX1	100	96.474	ENSPEMG00000017607	Rbfox1	100	96.474	Peromyscus_maniculatus_bairdii
ENSOGAG00000025535	RBFOX1	73	92.759	ENSPCIG00000026887	RBFOX1	100	92.759	Phascolarctos_cinereus
ENSOGAG00000025535	RBFOX1	84	97.289	ENSPPYG00000007079	-	84	97.289	Pongo_abelii
ENSOGAG00000025535	RBFOX1	88	87.179	ENSPCAG00000002630	RBFOX1	93	87.179	Procavia_capensis
ENSOGAG00000025535	RBFOX1	98	96.931	ENSPCOG00000025687	RBFOX1	94	96.931	Propithecus_coquereli
ENSOGAG00000025535	RBFOX1	98	91.816	ENSPVAG00000013467	RBFOX1	94	91.816	Pteropus_vampyrus
ENSOGAG00000025535	RBFOX1	95	81.360	ENSPNAG00000023109	rbfox1	100	81.360	Pygocentrus_nattereri
ENSOGAG00000025535	RBFOX1	98	97.436	ENSRNOG00000002827	Rbfox1	94	97.436	Rattus_norvegicus
ENSOGAG00000025535	RBFOX1	98	99.742	ENSRBIG00000044478	RBFOX1	100	99.742	Rhinopithecus_bieti
ENSOGAG00000025535	RBFOX1	98	97.187	ENSRROG00000044411	RBFOX1	94	97.187	Rhinopithecus_roxellana
ENSOGAG00000025535	RBFOX1	99	97.964	ENSSBOG00000033726	RBFOX1	98	97.964	Saimiri_boliviensis_boliviensis
ENSOGAG00000025535	RBFOX1	98	93.557	ENSSHAG00000009257	RBFOX1	98	93.557	Sarcophilus_harrisii
ENSOGAG00000025535	RBFOX1	99	67.506	ENSSFOG00015023675	rbfox1	98	67.254	Scleropages_formosus
ENSOGAG00000025535	RBFOX1	89	70.112	ENSSFOG00015009955	-	84	70.112	Scleropages_formosus
ENSOGAG00000025535	RBFOX1	98	76.601	ENSSMAG00000015505	rbfox1	96	73.315	Scophthalmus_maximus
ENSOGAG00000025535	RBFOX1	99	73.618	ENSSDUG00000016413	rbfox1	100	73.367	Seriola_dumerili
ENSOGAG00000025535	RBFOX1	85	72.059	ENSSLDG00000009353	rbfox1	97	70.238	Seriola_lalandi_dorsalis
ENSOGAG00000025535	RBFOX1	85	82.059	ENSSPUG00000009732	RBFOX1	87	82.059	Sphenodon_punctatus
ENSOGAG00000025535	RBFOX1	98	75.862	ENSSPAG00000009723	rbfox1	100	75.616	Stegastes_partitus
ENSOGAG00000025535	RBFOX1	95	97.878	ENSSSCG00000007917	RBFOX1	91	97.878	Sus_scrofa
ENSOGAG00000025535	RBFOX1	98	94.344	ENSTGUG00000004562	RBFOX1	100	94.344	Taeniopygia_guttata
ENSOGAG00000025535	RBFOX1	98	75.123	ENSTRUG00000020940	rbfox1	99	75.123	Takifugu_rubripes
ENSOGAG00000025535	RBFOX1	67	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSOGAG00000025535	RBFOX1	77	74.351	ENSTBEG00000009169	-	74	74.351	Tupaia_belangeri
ENSOGAG00000025535	RBFOX1	98	95.908	ENSTTRG00000005700	RBFOX1	94	95.908	Tursiops_truncatus
ENSOGAG00000025535	RBFOX1	96	94.517	ENSUAMG00000024633	RBFOX1	97	94.517	Ursus_americanus
ENSOGAG00000025535	RBFOX1	96	85.379	ENSUMAG00000003579	RBFOX1	97	85.379	Ursus_maritimus
ENSOGAG00000025535	RBFOX1	77	96.753	ENSVPAG00000001284	RBFOX1	74	96.753	Vicugna_pacos
ENSOGAG00000025535	RBFOX1	98	98.458	ENSVVUG00000017311	RBFOX1	89	98.458	Vulpes_vulpes