EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000025576 (Gene tree)
Gene ID: 100952123
Gene Symbol: TRMT1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 7758 bases
Position: chrGL873646.1:1445574-1453331
Accession: 100952123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000017534	zf-CCCH	PF00642.24	6.1e-06	1	1
ENSOGAP00000017534	TRM	PF02005.16	1.9e-146	1	1
ENSOGAP00000017534	Met_10	PF02475.16	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000030183	TRMT1-201	1914	XM_012810255	ENSOGAP00000017534	638 (aa)	XP_012665709	H0XN43

Gene Model

Click here to download ENSOGAG00000025576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000025576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000025576	TRMT1	99	87.184	ENSG00000104907	TRMT1	100	93.194	Homo_sapiens
ENSOGAG00000025576	TRMT1	98	85.463	ENSAMEG00000012598	TRMT1	93	85.463	Ailuropoda_melanoleuca
ENSOGAG00000025576	TRMT1	90	59.619	ENSACIG00000018680	trmt1	88	58.957	Amphilophus_citrinellus
ENSOGAG00000025576	TRMT1	91	66.149	ENSAOCG00000006781	trmt1	86	66.090	Amphiprion_ocellaris
ENSOGAG00000025576	TRMT1	91	66.552	ENSAPEG00000007712	trmt1	86	66.263	Amphiprion_percula
ENSOGAG00000025576	TRMT1	90	68.284	ENSATEG00000001872	trmt1	84	67.826	Anabas_testudineus
ENSOGAG00000025576	TRMT1	92	66.836	ENSACAG00000003825	TRMT1	95	66.102	Anolis_carolinensis
ENSOGAG00000025576	TRMT1	99	83.043	ENSANAG00000023016	TRMT1	97	85.386	Aotus_nancymaae
ENSOGAG00000025576	TRMT1	90	64.870	ENSACLG00000010073	trmt1	92	64.398	Astatotilapia_calliptera
ENSOGAG00000025576	TRMT1	90	67.128	ENSAMXG00000012026	trmt1	85	67.301	Astyanax_mexicanus
ENSOGAG00000025576	TRMT1	97	84.887	ENSBTAG00000019325	TRMT1	88	84.887	Bos_taurus
ENSOGAG00000025576	TRMT1	83	40.590	WBGene00006613	trm-1	96	39.338	Caenorhabditis_elegans
ENSOGAG00000025576	TRMT1	97	83.040	ENSCJAG00000004566	TRMT1	95	82.880	Callithrix_jacchus
ENSOGAG00000025576	TRMT1	99	85.374	ENSCAFG00000017070	TRMT1	97	86.710	Canis_familiaris
ENSOGAG00000025576	TRMT1	99	84.102	ENSCAFG00020005397	TRMT1	93	84.909	Canis_lupus_dingo
ENSOGAG00000025576	TRMT1	97	84.751	ENSCHIG00000013569	TRMT1	94	84.751	Capra_hircus
ENSOGAG00000025576	TRMT1	99	79.653	ENSTSYG00000003207	TRMT1	96	79.653	Carlito_syrichta
ENSOGAG00000025576	TRMT1	87	78.881	ENSCAPG00000003355	TRMT1	97	78.881	Cavia_aperea
ENSOGAG00000025576	TRMT1	97	81.190	ENSCPOG00000011754	TRMT1	93	81.190	Cavia_porcellus
ENSOGAG00000025576	TRMT1	98	81.440	ENSCCAG00000022263	TRMT1	97	83.882	Cebus_capucinus
ENSOGAG00000025576	TRMT1	85	73.474	ENSCATG00000038220	-	94	72.632	Cercocebus_atys
ENSOGAG00000025576	TRMT1	99	88.449	ENSCATG00000039850	TRMT1	95	88.449	Cercocebus_atys
ENSOGAG00000025576	TRMT1	97	84.903	ENSCLAG00000015295	TRMT1	95	81.922	Chinchilla_lanigera
ENSOGAG00000025576	TRMT1	81	88.224	ENSCSAG00000006500	TRMT1	97	88.224	Chlorocebus_sabaeus
ENSOGAG00000025576	TRMT1	95	67.267	ENSCPBG00000023866	TRMT1	89	67.758	Chrysemys_picta_bellii
ENSOGAG00000025576	TRMT1	88	46.737	ENSCING00000002884	-	99	45.855	Ciona_intestinalis
ENSOGAG00000025576	TRMT1	86	46.043	ENSCSAVG00000010927	-	100	45.741	Ciona_savignyi
ENSOGAG00000025576	TRMT1	95	68.264	ENSCANG00000031650	-	93	67.107	Colobus_angolensis_palliatus
ENSOGAG00000025576	TRMT1	100	70.359	ENSCANG00000040631	TRMT1	97	70.359	Colobus_angolensis_palliatus
ENSOGAG00000025576	TRMT1	100	80.721	ENSCGRG00001022594	Trmt1	97	80.878	Cricetulus_griseus_chok1gshd
ENSOGAG00000025576	TRMT1	99	81.171	ENSCGRG00000017732	Trmt1	95	81.329	Cricetulus_griseus_crigri
ENSOGAG00000025576	TRMT1	90	66.492	ENSCSEG00000001643	trmt1	84	68.155	Cynoglossus_semilaevis
ENSOGAG00000025576	TRMT1	91	66.952	ENSCVAG00000011886	trmt1	87	66.895	Cyprinodon_variegatus
ENSOGAG00000025576	TRMT1	90	65.345	ENSDARG00000010978	trmt1	85	65.345	Danio_rerio
ENSOGAG00000025576	TRMT1	85	59.083	ENSDNOG00000048240	-	92	59.083	Dasypus_novemcinctus
ENSOGAG00000025576	TRMT1	96	82.899	ENSDORG00000014298	Trmt1	93	82.573	Dipodomys_ordii
ENSOGAG00000025576	TRMT1	81	48.462	FBgn0032430	CG6388	87	48.462	Drosophila_melanogaster
ENSOGAG00000025576	TRMT1	81	53.295	ENSEBUG00000003449	trmt1	75	54.771	Eptatretus_burgeri
ENSOGAG00000025576	TRMT1	97	85.113	ENSEASG00005004050	TRMT1	97	85.113	Equus_asinus_asinus
ENSOGAG00000025576	TRMT1	97	85.437	ENSECAG00000016149	TRMT1	97	85.437	Equus_caballus
ENSOGAG00000025576	TRMT1	62	69.773	ENSEEUG00000014102	-	100	69.773	Erinaceus_europaeus
ENSOGAG00000025576	TRMT1	94	63.770	ENSELUG00000021659	trmt1	89	63.383	Esox_lucius
ENSOGAG00000025576	TRMT1	99	84.897	ENSFCAG00000000483	TRMT1	95	84.897	Felis_catus
ENSOGAG00000025576	TRMT1	97	82.986	ENSFDAG00000007386	TRMT1	94	82.986	Fukomys_damarensis
ENSOGAG00000025576	TRMT1	90	65.278	ENSFHEG00000012865	trmt1	85	70.019	Fundulus_heteroclitus
ENSOGAG00000025576	TRMT1	90	60.938	ENSGMOG00000006564	trmt1	98	60.938	Gadus_morhua
ENSOGAG00000025576	TRMT1	90	68.412	ENSGAFG00000011862	trmt1	88	68.412	Gambusia_affinis
ENSOGAG00000025576	TRMT1	90	64.000	ENSGACG00000000227	trmt1	92	64.000	Gasterosteus_aculeatus
ENSOGAG00000025576	TRMT1	94	68.053	ENSGAGG00000016432	TRMT1	88	67.887	Gopherus_agassizii
ENSOGAG00000025576	TRMT1	99	87.500	ENSGGOG00000014007	TRMT1	95	87.342	Gorilla_gorilla
ENSOGAG00000025576	TRMT1	88	58.541	ENSHBUG00000008821	trmt1	92	58.036	Haplochromis_burtoni
ENSOGAG00000025576	TRMT1	96	84.176	ENSHGLG00000015972	TRMT1	93	84.176	Heterocephalus_glaber_female
ENSOGAG00000025576	TRMT1	98	77.021	ENSHGLG00100018112	TRMT1	96	77.021	Heterocephalus_glaber_male
ENSOGAG00000025576	TRMT1	90	63.652	ENSHCOG00000009447	trmt1	88	63.304	Hippocampus_comes
ENSOGAG00000025576	TRMT1	93	63.681	ENSIPUG00000002899	trmt1	88	64.404	Ictalurus_punctatus
ENSOGAG00000025576	TRMT1	100	84.013	ENSSTOG00000012531	TRMT1	97	84.013	Ictidomys_tridecemlineatus
ENSOGAG00000025576	TRMT1	93	83.612	ENSJJAG00000017154	Trmt1	93	82.276	Jaculus_jaculus
ENSOGAG00000025576	TRMT1	90	68.063	ENSKMAG00000011809	trmt1	98	64.833	Kryptolebias_marmoratus
ENSOGAG00000025576	TRMT1	90	66.609	ENSLBEG00000012703	trmt1	84	66.492	Labrus_bergylta
ENSOGAG00000025576	TRMT1	90	57.986	ENSLACG00000014585	TRMT1	93	57.812	Latimeria_chalumnae
ENSOGAG00000025576	TRMT1	90	63.058	ENSLOCG00000006479	trmt1	97	63.058	Lepisosteus_oculatus
ENSOGAG00000025576	TRMT1	98	84.713	ENSLAFG00000014072	TRMT1	96	84.713	Loxodonta_africana
ENSOGAG00000025576	TRMT1	99	88.291	ENSMFAG00000033143	TRMT1	95	88.291	Macaca_fascicularis
ENSOGAG00000025576	TRMT1	99	81.487	ENSMMUG00000001167	TRMT1	96	81.487	Macaca_mulatta
ENSOGAG00000025576	TRMT1	99	87.975	ENSMNEG00000037867	TRMT1	95	87.975	Macaca_nemestrina
ENSOGAG00000025576	TRMT1	99	87.658	ENSMLEG00000016142	TRMT1	96	87.658	Mandrillus_leucophaeus
ENSOGAG00000025576	TRMT1	90	67.596	ENSMAMG00000004357	trmt1	85	67.596	Mastacembelus_armatus
ENSOGAG00000025576	TRMT1	90	65.391	ENSMZEG00005014510	trmt1	85	64.921	Maylandia_zebra
ENSOGAG00000025576	TRMT1	98	81.847	ENSMAUG00000011134	Trmt1	94	81.847	Mesocricetus_auratus
ENSOGAG00000025576	TRMT1	99	89.241	ENSMICG00000000793	TRMT1	95	89.082	Microcebus_murinus
ENSOGAG00000025576	TRMT1	98	82.006	ENSMOCG00000015895	Trmt1	94	82.006	Microtus_ochrogaster
ENSOGAG00000025576	TRMT1	90	66.143	ENSMMOG00000011097	trmt1	92	65.794	Mola_mola
ENSOGAG00000025576	TRMT1	96	73.290	ENSMODG00000011619	TRMT1	99	73.127	Monodelphis_domestica
ENSOGAG00000025576	TRMT1	100	81.377	MGP_CAROLIEiJ_G0031304	Trmt1	97	81.377	Mus_caroli
ENSOGAG00000025576	TRMT1	100	81.064	ENSMUSG00000001909	Trmt1	97	81.064	Mus_musculus
ENSOGAG00000025576	TRMT1	100	80.908	MGP_SPRETEiJ_G0032422	Trmt1	97	80.908	Mus_spretus
ENSOGAG00000025576	TRMT1	97	86.312	ENSMPUG00000004210	TRMT1	89	86.312	Mustela_putorius_furo
ENSOGAG00000025576	TRMT1	98	84.689	ENSMLUG00000012809	TRMT1	93	84.689	Myotis_lucifugus
ENSOGAG00000025576	TRMT1	98	81.629	ENSNGAG00000022486	Trmt1	94	80.831	Nannospalax_galili
ENSOGAG00000025576	TRMT1	78	69.254	ENSNBRG00000024376	trmt1	85	69.254	Neolamprologus_brichardi
ENSOGAG00000025576	TRMT1	84	88.701	ENSNLEG00000013019	-	94	88.701	Nomascus_leucogenys
ENSOGAG00000025576	TRMT1	93	74.118	ENSMEUG00000013756	TRMT1	99	74.118	Notamacropus_eugenii
ENSOGAG00000025576	TRMT1	81	86.215	ENSOPRG00000009471	-	78	86.215	Ochotona_princeps
ENSOGAG00000025576	TRMT1	99	82.857	ENSODEG00000010323	TRMT1	95	82.857	Octodon_degus
ENSOGAG00000025576	TRMT1	95	65.686	ENSONIG00000000400	trmt1	97	65.246	Oreochromis_niloticus
ENSOGAG00000025576	TRMT1	81	83.591	ENSOCUG00000021934	TRMT1	97	83.784	Oryctolagus_cuniculus
ENSOGAG00000025576	TRMT1	90	62.779	ENSORLG00000020074	trmt1	90	62.264	Oryzias_latipes
ENSOGAG00000025576	TRMT1	90	65.794	ENSORLG00020007561	trmt1	89	65.096	Oryzias_latipes_hni
ENSOGAG00000025576	TRMT1	90	65.794	ENSORLG00015006547	trmt1	86	65.445	Oryzias_latipes_hsok
ENSOGAG00000025576	TRMT1	90	65.969	ENSOMEG00000019343	trmt1	86	65.969	Oryzias_melastigma
ENSOGAG00000025576	TRMT1	97	69.551	ENSOARG00000009397	TRMT1	88	69.712	Ovis_aries
ENSOGAG00000025576	TRMT1	99	77.901	ENSPPRG00000012117	TRMT1	96	77.901	Panthera_pardus
ENSOGAG00000025576	TRMT1	76	84.498	ENSPTIG00000008833	TRMT1	93	84.498	Panthera_tigris_altaica
ENSOGAG00000025576	TRMT1	99	87.342	ENSPTRG00000010557	TRMT1	95	87.184	Pan_troglodytes
ENSOGAG00000025576	TRMT1	96	67.047	ENSPTRG00000050421	-	93	66.884	Pan_troglodytes
ENSOGAG00000025576	TRMT1	87	73.211	ENSPANG00000034058	-	94	72.597	Papio_anubis
ENSOGAG00000025576	TRMT1	99	88.291	ENSPANG00000009247	TRMT1	95	88.291	Papio_anubis
ENSOGAG00000025576	TRMT1	90	67.535	ENSPKIG00000005309	trmt1	84	66.783	Paramormyrops_kingsleyae
ENSOGAG00000025576	TRMT1	92	58.673	ENSPSIG00000008762	TRMT1	83	58.333	Pelodiscus_sinensis
ENSOGAG00000025576	TRMT1	95	63.427	ENSPMGG00000019764	trmt1	95	63.591	Periophthalmus_magnuspinnatus
ENSOGAG00000025576	TRMT1	99	82.595	ENSPEMG00000016247	Trmt1	95	82.753	Peromyscus_maniculatus_bairdii
ENSOGAG00000025576	TRMT1	91	59.520	ENSPMAG00000004329	trmt1	91	59.520	Petromyzon_marinus
ENSOGAG00000025576	TRMT1	98	72.814	ENSPCIG00000019273	TRMT1	97	72.337	Phascolarctos_cinereus
ENSOGAG00000025576	TRMT1	90	69.284	ENSPFOG00000008527	trmt1	88	69.284	Poecilia_formosa
ENSOGAG00000025576	TRMT1	90	68.935	ENSPLAG00000018788	trmt1	88	70.690	Poecilia_latipinna
ENSOGAG00000025576	TRMT1	90	69.110	ENSPMEG00000013120	trmt1	88	69.110	Poecilia_mexicana
ENSOGAG00000025576	TRMT1	90	68.237	ENSPREG00000000211	trmt1	85	68.237	Poecilia_reticulata
ENSOGAG00000025576	TRMT1	99	87.500	ENSPPYG00000009622	TRMT1	95	87.342	Pongo_abelii
ENSOGAG00000025576	TRMT1	99	77.690	ENSPCAG00000003698	TRMT1	96	77.690	Procavia_capensis
ENSOGAG00000025576	TRMT1	99	89.399	ENSPCOG00000008653	TRMT1	96	89.241	Propithecus_coquereli
ENSOGAG00000025576	TRMT1	99	84.019	ENSPVAG00000015076	TRMT1	96	84.019	Pteropus_vampyrus
ENSOGAG00000025576	TRMT1	90	64.000	ENSPNYG00000013960	trmt1	92	63.525	Pundamilia_nyererei
ENSOGAG00000025576	TRMT1	84	68.815	ENSPNAG00000024859	trmt1	88	68.815	Pygocentrus_nattereri
ENSOGAG00000025576	TRMT1	97	82.742	ENSRNOG00000002914	Trmt1	96	82.742	Rattus_norvegicus
ENSOGAG00000025576	TRMT1	99	87.342	ENSRBIG00000038324	TRMT1	95	87.342	Rhinopithecus_bieti
ENSOGAG00000025576	TRMT1	95	68.863	ENSRBIG00000037505	-	94	68.699	Rhinopithecus_bieti
ENSOGAG00000025576	TRMT1	95	68.204	ENSRROG00000031847	-	93	68.040	Rhinopithecus_roxellana
ENSOGAG00000025576	TRMT1	99	87.184	ENSRROG00000028599	TRMT1	95	87.184	Rhinopithecus_roxellana
ENSOGAG00000025576	TRMT1	80	36.617	YDR120C	-	92	36.754	Saccharomyces_cerevisiae
ENSOGAG00000025576	TRMT1	98	82.400	ENSSBOG00000028861	TRMT1	97	84.375	Saimiri_boliviensis_boliviensis
ENSOGAG00000025576	TRMT1	90	76.910	ENSSHAG00000014381	TRMT1	94	76.289	Sarcophilus_harrisii
ENSOGAG00000025576	TRMT1	90	67.652	ENSSFOG00015004139	trmt1	84	67.652	Scleropages_formosus
ENSOGAG00000025576	TRMT1	90	66.725	ENSSMAG00000021136	trmt1	85	66.725	Scophthalmus_maximus
ENSOGAG00000025576	TRMT1	90	66.957	ENSSDUG00000012740	trmt1	84	66.667	Seriola_dumerili
ENSOGAG00000025576	TRMT1	90	66.783	ENSSLDG00000005971	trmt1	84	66.492	Seriola_lalandi_dorsalis
ENSOGAG00000025576	TRMT1	86	82.847	ENSSARG00000005138	TRMT1	96	82.664	Sorex_araneus
ENSOGAG00000025576	TRMT1	90	54.593	ENSSPUG00000001084	TRMT1	90	54.296	Sphenodon_punctatus
ENSOGAG00000025576	TRMT1	94	63.411	ENSSPAG00000007153	trmt1	94	64.360	Stegastes_partitus
ENSOGAG00000025576	TRMT1	97	86.151	ENSSSCG00000013744	TRMT1	97	86.151	Sus_scrofa
ENSOGAG00000025576	TRMT1	89	62.392	ENSTRUG00000010700	trmt1	86	62.392	Takifugu_rubripes
ENSOGAG00000025576	TRMT1	90	65.217	ENSTNIG00000018808	trmt1	98	65.043	Tetraodon_nigroviridis
ENSOGAG00000025576	TRMT1	98	82.456	ENSTTRG00000006379	TRMT1	96	81.804	Tursiops_truncatus
ENSOGAG00000025576	TRMT1	99	85.039	ENSUAMG00000022911	TRMT1	96	85.463	Ursus_americanus
ENSOGAG00000025576	TRMT1	97	85.737	ENSUMAG00000006027	TRMT1	97	85.737	Ursus_maritimus
ENSOGAG00000025576	TRMT1	99	85.215	ENSVVUG00000024177	TRMT1	95	85.215	Vulpes_vulpes
ENSOGAG00000025576	TRMT1	73	71.274	ENSXETG00000033863	TRMT1	92	71.274	Xenopus_tropicalis
ENSOGAG00000025576	TRMT1	90	68.237	ENSXCOG00000015733	trmt1	88	68.237	Xiphophorus_couchianus
ENSOGAG00000025576	TRMT1	90	67.882	ENSXMAG00000013823	trmt1	98	67.882	Xiphophorus_maculatus