EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000026166 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 1110 bases
Position: chrGL873702.1:377288-378397
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000016553	RRM_5	PF13893.6	1.6e-13	1	3
ENSOGAP00000016553	RRM_5	PF13893.6	1.6e-13	2	3
ENSOGAP00000016553	RRM_5	PF13893.6	1.6e-13	3	3
ENSOGAP00000016553	RRM_1	PF00076.22	1.5e-79	1	4
ENSOGAP00000016553	RRM_1	PF00076.22	1.5e-79	2	4
ENSOGAP00000016553	RRM_1	PF00076.22	1.5e-79	3	4
ENSOGAP00000016553	RRM_1	PF00076.22	1.5e-79	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000029461	PABPC4L-201	1053	-	ENSOGAP00000016553	351 (aa)	-	H0XKB3

Gene Model

Click here to download ENSOGAG00000026166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000026166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000026166	PABPC4L	94	30.435	ENSOGAG00000025754	HNRNPA0	64	30.216
ENSOGAG00000026166	PABPC4L	98	55.102	ENSOGAG00000026047	-	98	55.102
ENSOGAG00000026166	PABPC4L	71	38.158	ENSOGAG00000026654	RBM3	68	38.158
ENSOGAG00000026166	PABPC4L	98	55.102	ENSOGAG00000029513	-	98	55.102
ENSOGAG00000026166	PABPC4L	98	61.157	ENSOGAG00000032999	PABPC1L	58	61.157
ENSOGAG00000026166	PABPC4L	50	37.975	ENSOGAG00000031801	-	50	37.975
ENSOGAG00000026166	PABPC4L	97	57.865	ENSOGAG00000006882	PABPC5	96	57.967
ENSOGAG00000026166	PABPC4L	97	61.003	ENSOGAG00000033369	-	61	61.003
ENSOGAG00000026166	PABPC4L	99	66.571	ENSOGAG00000007921	-	61	66.571
ENSOGAG00000026166	PABPC4L	99	64.286	ENSOGAG00000033115	-	61	64.286
ENSOGAG00000026166	PABPC4L	66	38.554	ENSOGAG00000029550	CIRBP	74	38.554
ENSOGAG00000026166	PABPC4L	98	64.738	ENSOGAG00000025522	-	59	64.738
ENSOGAG00000026166	PABPC4L	54	39.024	ENSOGAG00000010907	MYEF2	51	39.024
ENSOGAG00000026166	PABPC4L	99	70.270	ENSOGAG00000004067	PABPC4	59	70.270
ENSOGAG00000026166	PABPC4L	72	30.168	ENSOGAG00000030687	-	50	30.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000026166	PABPC4L	100	87.568	ENSG00000254535	PABPC4L	100	87.568	Homo_sapiens
ENSOGAG00000026166	PABPC4L	100	84.865	ENSANAG00000017199	PABPC4L	87	84.865	Aotus_nancymaae
ENSOGAG00000026166	PABPC4L	99	83.198	ENSBTAG00000046902	PABPC4L	99	83.198	Bos_taurus
ENSOGAG00000026166	PABPC4L	100	85.405	ENSCJAG00000045332	PABPC4L	86	85.405	Callithrix_jacchus
ENSOGAG00000026166	PABPC4L	99	67.391	ENSCAFG00020019182	-	54	67.391	Canis_lupus_dingo
ENSOGAG00000026166	PABPC4L	99	83.198	ENSCHIG00000007231	PABPC4L	99	83.198	Capra_hircus
ENSOGAG00000026166	PABPC4L	98	75.224	ENSCAPG00000000555	PABPC4L	100	75.224	Cavia_aperea
ENSOGAG00000026166	PABPC4L	100	72.432	ENSCPOG00000033167	PABPC4L	100	72.432	Cavia_porcellus
ENSOGAG00000026166	PABPC4L	100	85.135	ENSCCAG00000031681	PABPC4L	86	85.135	Cebus_capucinus
ENSOGAG00000026166	PABPC4L	100	78.108	ENSCLAG00000017628	PABPC4L	100	78.108	Chinchilla_lanigera
ENSOGAG00000026166	PABPC4L	100	85.135	ENSCANG00000037677	PABPC4L	100	85.135	Colobus_angolensis_palliatus
ENSOGAG00000026166	PABPC4L	100	75.405	ENSCGRG00001002070	Pabpc4l	100	75.405	Cricetulus_griseus_chok1gshd
ENSOGAG00000026166	PABPC4L	100	75.405	ENSCGRG00000020086	Pabpc4l	100	75.405	Cricetulus_griseus_crigri
ENSOGAG00000026166	PABPC4L	100	86.486	ENSDNOG00000031077	PABPC4L	95	86.486	Dasypus_novemcinctus
ENSOGAG00000026166	PABPC4L	99	82.656	ENSEASG00005007883	PABPC4L	99	82.656	Equus_asinus_asinus
ENSOGAG00000026166	PABPC4L	99	82.927	ENSECAG00000031416	PABPC4L	99	82.927	Equus_caballus
ENSOGAG00000026166	PABPC4L	99	83.469	ENSFCAG00000028270	PABPC4L	99	83.469	Felis_catus
ENSOGAG00000026166	PABPC4L	99	77.236	ENSFDAG00000019606	PABPC4L	99	77.236	Fukomys_damarensis
ENSOGAG00000026166	PABPC4L	100	87.027	ENSGGOG00000024991	PABPC4L	100	87.027	Gorilla_gorilla
ENSOGAG00000026166	PABPC4L	99	76.965	ENSHGLG00000020104	PABPC4L	99	76.965	Heterocephalus_glaber_female
ENSOGAG00000026166	PABPC4L	99	76.965	ENSHGLG00100020648	PABPC4L	99	76.965	Heterocephalus_glaber_male
ENSOGAG00000026166	PABPC4L	100	80.054	ENSSTOG00000019472	PABPC4L	99	80.054	Ictidomys_tridecemlineatus
ENSOGAG00000026166	PABPC4L	99	76.965	ENSJJAG00000004090	Pabpc4l	99	76.965	Jaculus_jaculus
ENSOGAG00000026166	PABPC4L	100	75.405	ENSMAUG00000016313	Pabpc4l	100	75.405	Mesocricetus_auratus
ENSOGAG00000026166	PABPC4L	100	88.649	ENSMICG00000029683	PABPC4L	100	88.649	Microcebus_murinus
ENSOGAG00000026166	PABPC4L	100	76.486	ENSMOCG00000007551	Pabpc4l	100	76.486	Microtus_ochrogaster
ENSOGAG00000026166	PABPC4L	100	74.324	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	78.000	Mus_caroli
ENSOGAG00000026166	PABPC4L	100	74.595	ENSMUSG00000090919	Pabpc4l	100	78.000	Mus_musculus
ENSOGAG00000026166	PABPC4L	100	74.595	MGP_PahariEiJ_G0026409	Pabpc4l	100	76.000	Mus_pahari
ENSOGAG00000026166	PABPC4L	100	74.324	MGP_SPRETEiJ_G0025903	Pabpc4l	100	78.000	Mus_spretus
ENSOGAG00000026166	PABPC4L	99	73.713	ENSMLUG00000008254	PABPC4L	99	73.713	Myotis_lucifugus
ENSOGAG00000026166	PABPC4L	100	80.000	ENSNGAG00000001502	Pabpc4l	100	80.000	Nannospalax_galili
ENSOGAG00000026166	PABPC4L	100	87.297	ENSNLEG00000019300	PABPC4L	100	87.297	Nomascus_leucogenys
ENSOGAG00000026166	PABPC4L	99	86.997	ENSPPAG00000043745	PABPC4L	92	86.997	Pan_paniscus
ENSOGAG00000026166	PABPC4L	99	83.198	ENSPPRG00000018628	PABPC4L	99	83.198	Panthera_pardus
ENSOGAG00000026166	PABPC4L	99	83.469	ENSPTIG00000010106	PABPC4L	99	83.469	Panthera_tigris_altaica
ENSOGAG00000026166	PABPC4L	99	86.997	ENSPTRG00000045513	-	79	86.997	Pan_troglodytes
ENSOGAG00000026166	PABPC4L	100	76.216	ENSPEMG00000012565	Pabpc4l	100	76.216	Peromyscus_maniculatus_bairdii
ENSOGAG00000026166	PABPC4L	100	88.378	ENSPCOG00000025578	PABPC4L	100	88.378	Propithecus_coquereli
ENSOGAG00000026166	PABPC4L	100	74.324	ENSRNOG00000029749	Pabpc4l	100	74.324	Rattus_norvegicus
ENSOGAG00000026166	PABPC4L	100	84.324	ENSRBIG00000030229	PABPC4L	100	84.324	Rhinopithecus_bieti
ENSOGAG00000026166	PABPC4L	100	84.054	ENSRROG00000020367	PABPC4L	100	84.054	Rhinopithecus_roxellana
ENSOGAG00000026166	PABPC4L	100	84.324	ENSSBOG00000016382	PABPC4L	100	84.324	Saimiri_boliviensis_boliviensis
ENSOGAG00000026166	PABPC4L	99	86.000	ENSSSCG00000009067	PABPC4L	99	86.000	Sus_scrofa
ENSOGAG00000026166	PABPC4L	99	82.385	ENSUAMG00000001289	PABPC4L	99	82.385	Ursus_americanus
ENSOGAG00000026166	PABPC4L	99	82.385	ENSUMAG00000014887	PABPC4L	99	82.385	Ursus_maritimus
ENSOGAG00000026166	PABPC4L	95	67.470	ENSVVUG00000011060	-	76	67.470	Vulpes_vulpes