EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000026182 (Gene tree)
Gene ID: 100955715
Gene Symbol: RNPC3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 24097 bases
Position: chrGL873529.1:6672952-6697048
Accession: 100955715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000020063	RRM_1	PF00076.22	2.1e-18	1	2
ENSOGAP00000020063	RRM_1	PF00076.22	2.1e-18	2	2
ENSOGAP00000019386	RRM_1	PF00076.22	2.2e-18	1	2
ENSOGAP00000019386	RRM_1	PF00076.22	2.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000034314	RNPC3-202	1790	XM_003784096	ENSOGAP00000020063	516 (aa)	XP_003784144	H0XVC1
ENSOGAT00000028040	RNPC3-201	1799	-	ENSOGAP00000019386	519 (aa)	-	H0XTE4

Gene Model

Click here to download ENSOGAG00000026182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000026182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000026182	RNPC3	100	93.810	ENSG00000185946	RNPC3	100	93.810	Homo_sapiens
ENSOGAG00000026182	RNPC3	95	57.258	ENSAPOG00000017371	rnpc3	97	57.258	Acanthochromis_polyacanthus
ENSOGAG00000026182	RNPC3	98	93.320	ENSAMEG00000001694	RNPC3	100	92.692	Ailuropoda_melanoleuca
ENSOGAG00000026182	RNPC3	95	53.187	ENSACIG00000021043	rnpc3	97	53.187	Amphilophus_citrinellus
ENSOGAG00000026182	RNPC3	95	56.687	ENSAOCG00000014052	rnpc3	95	56.687	Amphiprion_ocellaris
ENSOGAG00000026182	RNPC3	95	56.487	ENSAPEG00000008739	rnpc3	95	56.487	Amphiprion_percula
ENSOGAG00000026182	RNPC3	95	55.534	ENSATEG00000021263	rnpc3	97	55.534	Anabas_testudineus
ENSOGAG00000026182	RNPC3	87	69.757	ENSAPLG00000015605	RNPC3	99	70.419	Anas_platyrhynchos
ENSOGAG00000026182	RNPC3	99	66.082	ENSACAG00000002029	RNPC3	96	69.168	Anolis_carolinensis
ENSOGAG00000026182	RNPC3	100	93.037	ENSANAG00000019950	RNPC3	100	93.037	Aotus_nancymaae
ENSOGAG00000026182	RNPC3	95	54.858	ENSACLG00000014702	rnpc3	96	54.858	Astatotilapia_calliptera
ENSOGAG00000026182	RNPC3	94	55.912	ENSAMXG00000033372	rnpc3	96	57.661	Astyanax_mexicanus
ENSOGAG00000026182	RNPC3	100	92.650	ENSBTAG00000019091	RNPC3	100	92.650	Bos_taurus
ENSOGAG00000026182	RNPC3	100	88.781	ENSCJAG00000035686	RNPC3	100	86.667	Callithrix_jacchus
ENSOGAG00000026182	RNPC3	100	92.471	ENSCAFG00000019972	RNPC3	100	92.471	Canis_familiaris
ENSOGAG00000026182	RNPC3	100	92.664	ENSCAFG00020011300	RNPC3	100	92.664	Canis_lupus_dingo
ENSOGAG00000026182	RNPC3	100	93.037	ENSCHIG00000020361	RNPC3	100	93.037	Capra_hircus
ENSOGAG00000026182	RNPC3	100	92.263	ENSTSYG00000030256	RNPC3	100	92.263	Carlito_syrichta
ENSOGAG00000026182	RNPC3	84	79.634	ENSCAPG00000013600	RNPC3	99	78.719	Cavia_aperea
ENSOGAG00000026182	RNPC3	100	90.716	ENSCPOG00000031638	RNPC3	100	90.716	Cavia_porcellus
ENSOGAG00000026182	RNPC3	100	93.230	ENSCCAG00000024301	RNPC3	100	93.230	Cebus_capucinus
ENSOGAG00000026182	RNPC3	99	93.398	ENSCATG00000002086	RNPC3	99	93.398	Cercocebus_atys
ENSOGAG00000026182	RNPC3	98	70.891	ENSCATG00000035930	-	98	69.505	Cercocebus_atys
ENSOGAG00000026182	RNPC3	100	87.041	ENSCLAG00000005169	RNPC3	100	87.041	Chinchilla_lanigera
ENSOGAG00000026182	RNPC3	99	93.398	ENSCSAG00000001519	RNPC3	99	93.398	Chlorocebus_sabaeus
ENSOGAG00000026182	RNPC3	99	69.098	ENSCPBG00000028311	RNPC3	95	71.169	Chrysemys_picta_bellii
ENSOGAG00000026182	RNPC3	93	36.983	ENSCSAVG00000002800	-	74	60.833	Ciona_savignyi
ENSOGAG00000026182	RNPC3	99	93.204	ENSCANG00000031444	RNPC3	99	93.204	Colobus_angolensis_palliatus
ENSOGAG00000026182	RNPC3	99	89.922	ENSCGRG00001019276	Rnpc3	100	89.922	Cricetulus_griseus_chok1gshd
ENSOGAG00000026182	RNPC3	87	90.265	ENSCGRG00000000053	Rnpc3	100	90.265	Cricetulus_griseus_crigri
ENSOGAG00000026182	RNPC3	94	54.747	ENSCSEG00000013475	rnpc3	96	54.747	Cynoglossus_semilaevis
ENSOGAG00000026182	RNPC3	94	55.268	ENSCVAG00000002645	rnpc3	97	54.941	Cyprinodon_variegatus
ENSOGAG00000026182	RNPC3	95	56.151	ENSDARG00000011247	rnpc3	96	64.607	Danio_rerio
ENSOGAG00000026182	RNPC3	100	90.909	ENSDNOG00000044555	-	100	90.909	Dasypus_novemcinctus
ENSOGAG00000026182	RNPC3	100	90.909	ENSDNOG00000047498	-	100	90.909	Dasypus_novemcinctus
ENSOGAG00000026182	RNPC3	99	90.116	ENSDORG00000027343	Rnpc3	99	90.116	Dipodomys_ordii
ENSOGAG00000026182	RNPC3	95	48.532	ENSEBUG00000002068	rnpc3	97	48.235	Eptatretus_burgeri
ENSOGAG00000026182	RNPC3	100	92.664	ENSEASG00005015957	RNPC3	100	92.664	Equus_asinus_asinus
ENSOGAG00000026182	RNPC3	100	93.436	ENSECAG00000021148	RNPC3	100	93.436	Equus_caballus
ENSOGAG00000026182	RNPC3	95	54.207	ENSELUG00000002264	rnpc3	97	55.319	Esox_lucius
ENSOGAG00000026182	RNPC3	100	92.857	ENSFCAG00000024312	RNPC3	100	92.857	Felis_catus
ENSOGAG00000026182	RNPC3	87	71.744	ENSFALG00000002580	RNPC3	99	72.115	Ficedula_albicollis
ENSOGAG00000026182	RNPC3	99	91.473	ENSFDAG00000019948	RNPC3	100	91.473	Fukomys_damarensis
ENSOGAG00000026182	RNPC3	95	51.509	ENSFHEG00000020647	rnpc3	98	50.294	Fundulus_heteroclitus
ENSOGAG00000026182	RNPC3	95	53.908	ENSGMOG00000019213	rnpc3	95	53.131	Gadus_morhua
ENSOGAG00000026182	RNPC3	95	72.065	ENSGALG00000005162	RNPC3	89	71.457	Gallus_gallus
ENSOGAG00000026182	RNPC3	97	54.012	ENSGAFG00000017236	rnpc3	98	54.012	Gambusia_affinis
ENSOGAG00000026182	RNPC3	95	54.970	ENSGACG00000002048	rnpc3	96	54.762	Gasterosteus_aculeatus
ENSOGAG00000026182	RNPC3	95	70.766	ENSGAGG00000008438	RNPC3	95	70.968	Gopherus_agassizii
ENSOGAG00000026182	RNPC3	98	75.984	ENSGGOG00000026201	-	98	75.984	Gorilla_gorilla
ENSOGAG00000026182	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSOGAG00000026182	RNPC3	100	91.296	ENSHGLG00000001708	RNPC3	100	91.296	Heterocephalus_glaber_female
ENSOGAG00000026182	RNPC3	100	91.296	ENSHGLG00100003005	RNPC3	100	91.296	Heterocephalus_glaber_male
ENSOGAG00000026182	RNPC3	95	54.890	ENSHCOG00000017135	rnpc3	97	54.890	Hippocampus_comes
ENSOGAG00000026182	RNPC3	95	57.114	ENSIPUG00000002916	rnpc3	97	57.114	Ictalurus_punctatus
ENSOGAG00000026182	RNPC3	100	92.456	ENSSTOG00000025020	RNPC3	100	92.456	Ictidomys_tridecemlineatus
ENSOGAG00000026182	RNPC3	99	88.953	ENSJJAG00000010203	Rnpc3	100	88.953	Jaculus_jaculus
ENSOGAG00000026182	RNPC3	95	55.263	ENSKMAG00000017358	rnpc3	97	54.672	Kryptolebias_marmoratus
ENSOGAG00000026182	RNPC3	95	56.452	ENSLBEG00000024901	rnpc3	95	56.452	Labrus_bergylta
ENSOGAG00000026182	RNPC3	95	62.118	ENSLACG00000005720	RNPC3	90	62.677	Latimeria_chalumnae
ENSOGAG00000026182	RNPC3	95	61.145	ENSLOCG00000007986	rnpc3	96	61.145	Lepisosteus_oculatus
ENSOGAG00000026182	RNPC3	99	89.922	ENSLAFG00000032342	RNPC3	100	89.922	Loxodonta_africana
ENSOGAG00000026182	RNPC3	98	67.921	ENSMFAG00000002917	-	97	68.119	Macaca_fascicularis
ENSOGAG00000026182	RNPC3	99	93.204	ENSMFAG00000002004	RNPC3	99	93.204	Macaca_fascicularis
ENSOGAG00000026182	RNPC3	81	85.514	ENSMMUG00000002098	-	90	85.514	Macaca_mulatta
ENSOGAG00000026182	RNPC3	99	93.204	ENSMMUG00000018039	RNPC3	99	93.204	Macaca_mulatta
ENSOGAG00000026182	RNPC3	84	72.475	ENSMNEG00000029209	-	98	65.545	Macaca_nemestrina
ENSOGAG00000026182	RNPC3	99	88.350	ENSMNEG00000033950	RNPC3	99	88.350	Macaca_nemestrina
ENSOGAG00000026182	RNPC3	99	93.398	ENSMLEG00000033628	RNPC3	99	93.398	Mandrillus_leucophaeus
ENSOGAG00000026182	RNPC3	98	70.117	ENSMLEG00000034644	-	98	66.342	Mandrillus_leucophaeus
ENSOGAG00000026182	RNPC3	95	52.475	ENSMAMG00000007496	rnpc3	97	51.252	Mastacembelus_armatus
ENSOGAG00000026182	RNPC3	95	53.663	ENSMZEG00005020233	rnpc3	97	53.465	Maylandia_zebra
ENSOGAG00000026182	RNPC3	87	70.395	ENSMGAG00000006381	RNPC3	99	70.549	Meleagris_gallopavo
ENSOGAG00000026182	RNPC3	97	90.982	ENSMAUG00000001358	Rnpc3	100	90.310	Mesocricetus_auratus
ENSOGAG00000026182	RNPC3	99	96.318	ENSMICG00000029591	RNPC3	99	96.318	Microcebus_murinus
ENSOGAG00000026182	RNPC3	97	90.000	ENSMOCG00000013423	Rnpc3	100	88.996	Microtus_ochrogaster
ENSOGAG00000026182	RNPC3	95	52.121	ENSMMOG00000005309	rnpc3	97	51.896	Mola_mola
ENSOGAG00000026182	RNPC3	99	78.252	ENSMODG00000002946	RNPC3	99	78.252	Monodelphis_domestica
ENSOGAG00000026182	RNPC3	95	53.414	ENSMALG00000015471	rnpc3	97	53.414	Monopterus_albus
ENSOGAG00000026182	RNPC3	99	87.791	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.791	Mus_caroli
ENSOGAG00000026182	RNPC3	99	88.372	ENSMUSG00000027981	Rnpc3	100	88.372	Mus_musculus
ENSOGAG00000026182	RNPC3	99	88.178	MGP_PahariEiJ_G0027001	Rnpc3	100	88.178	Mus_pahari
ENSOGAG00000026182	RNPC3	99	87.791	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.791	Mus_spretus
ENSOGAG00000026182	RNPC3	100	92.085	ENSMPUG00000007349	RNPC3	100	92.085	Mustela_putorius_furo
ENSOGAG00000026182	RNPC3	100	89.362	ENSMLUG00000028743	RNPC3	100	89.362	Myotis_lucifugus
ENSOGAG00000026182	RNPC3	99	90.078	ENSNGAG00000010939	Rnpc3	100	89.768	Nannospalax_galili
ENSOGAG00000026182	RNPC3	95	54.656	ENSNBRG00000012196	rnpc3	93	54.656	Neolamprologus_brichardi
ENSOGAG00000026182	RNPC3	100	93.424	ENSNLEG00000012013	RNPC3	100	93.424	Nomascus_leucogenys
ENSOGAG00000026182	RNPC3	100	88.008	ENSODEG00000007612	RNPC3	100	88.008	Octodon_degus
ENSOGAG00000026182	RNPC3	95	55.050	ENSONIG00000004770	rnpc3	99	54.910	Oreochromis_niloticus
ENSOGAG00000026182	RNPC3	90	77.468	ENSOANG00000008220	RNPC3	99	77.468	Ornithorhynchus_anatinus
ENSOGAG00000026182	RNPC3	100	91.683	ENSOCUG00000004016	RNPC3	100	91.683	Oryctolagus_cuniculus
ENSOGAG00000026182	RNPC3	95	54.418	ENSORLG00000005694	rnpc3	97	54.418	Oryzias_latipes
ENSOGAG00000026182	RNPC3	95	55.131	ENSORLG00020005513	rnpc3	97	55.131	Oryzias_latipes_hni
ENSOGAG00000026182	RNPC3	95	54.728	ENSORLG00015002179	rnpc3	97	54.728	Oryzias_latipes_hsok
ENSOGAG00000026182	RNPC3	95	55.354	ENSOMEG00000017737	rnpc3	97	55.354	Oryzias_melastigma
ENSOGAG00000026182	RNPC3	100	92.843	ENSOARG00000018719	RNPC3	100	92.843	Ovis_aries
ENSOGAG00000026182	RNPC3	100	93.436	ENSPPAG00000037459	RNPC3	100	93.436	Pan_paniscus
ENSOGAG00000026182	RNPC3	100	76.163	ENSPPAG00000030278	-	100	76.357	Pan_paniscus
ENSOGAG00000026182	RNPC3	100	92.857	ENSPPRG00000020246	RNPC3	100	92.857	Panthera_pardus
ENSOGAG00000026182	RNPC3	98	93.110	ENSPTIG00000009887	RNPC3	100	93.110	Panthera_tigris_altaica
ENSOGAG00000026182	RNPC3	100	93.617	ENSPTRG00000033902	RNPC3	100	93.617	Pan_troglodytes
ENSOGAG00000026182	RNPC3	100	75.194	ENSPTRG00000044227	-	100	75.194	Pan_troglodytes
ENSOGAG00000026182	RNPC3	98	72.978	ENSPANG00000029957	-	99	71.598	Papio_anubis
ENSOGAG00000026182	RNPC3	99	93.398	ENSPANG00000012137	RNPC3	99	93.398	Papio_anubis
ENSOGAG00000026182	RNPC3	95	53.200	ENSPKIG00000008828	rnpc3	95	53.360	Paramormyrops_kingsleyae
ENSOGAG00000026182	RNPC3	63	70.091	ENSPSIG00000007396	RNPC3	99	67.976	Pelodiscus_sinensis
ENSOGAG00000026182	RNPC3	93	52.024	ENSPMGG00000011742	rnpc3	95	52.130	Periophthalmus_magnuspinnatus
ENSOGAG00000026182	RNPC3	88	89.497	ENSPEMG00000020112	Rnpc3	100	90.265	Peromyscus_maniculatus_bairdii
ENSOGAG00000026182	RNPC3	51	46.067	ENSPMAG00000003778	rnpc3	98	41.746	Petromyzon_marinus
ENSOGAG00000026182	RNPC3	99	79.417	ENSPCIG00000004415	-	99	79.417	Phascolarctos_cinereus
ENSOGAG00000026182	RNPC3	96	53.280	ENSPFOG00000009895	rnpc3	97	53.280	Poecilia_formosa
ENSOGAG00000026182	RNPC3	96	53.280	ENSPLAG00000012023	rnpc3	97	53.280	Poecilia_latipinna
ENSOGAG00000026182	RNPC3	96	53.571	ENSPMEG00000003663	rnpc3	97	53.479	Poecilia_mexicana
ENSOGAG00000026182	RNPC3	96	53.082	ENSPREG00000010206	rnpc3	98	53.280	Poecilia_reticulata
ENSOGAG00000026182	RNPC3	84	89.862	ENSPPYG00000001102	RNPC3	99	89.862	Pongo_abelii
ENSOGAG00000026182	RNPC3	95	54.656	ENSPNYG00000020603	rnpc3	96	54.656	Pundamilia_nyererei
ENSOGAG00000026182	RNPC3	96	54.971	ENSPNAG00000000524	rnpc3	90	55.294	Pygocentrus_nattereri
ENSOGAG00000026182	RNPC3	99	87.984	ENSRNOG00000017310	Rnpc3	100	87.984	Rattus_norvegicus
ENSOGAG00000026182	RNPC3	99	87.984	ENSRBIG00000043897	RNPC3	99	87.984	Rhinopithecus_bieti
ENSOGAG00000026182	RNPC3	99	93.786	ENSRROG00000032334	RNPC3	99	93.786	Rhinopithecus_roxellana
ENSOGAG00000026182	RNPC3	100	92.650	ENSSBOG00000024473	RNPC3	100	92.650	Saimiri_boliviensis_boliviensis
ENSOGAG00000026182	RNPC3	99	78.252	ENSSHAG00000011859	RNPC3	99	78.252	Sarcophilus_harrisii
ENSOGAG00000026182	RNPC3	95	60.404	ENSSFOG00015013055	rnpc3	99	60.202	Scleropages_formosus
ENSOGAG00000026182	RNPC3	95	52.695	ENSSMAG00000020346	rnpc3	97	52.976	Scophthalmus_maximus
ENSOGAG00000026182	RNPC3	95	55.467	ENSSDUG00000006600	rnpc3	96	55.467	Seriola_dumerili
ENSOGAG00000026182	RNPC3	95	55.865	ENSSLDG00000007979	rnpc3	96	55.865	Seriola_lalandi_dorsalis
ENSOGAG00000026182	RNPC3	96	65.538	ENSSPUG00000003872	-	93	65.737	Sphenodon_punctatus
ENSOGAG00000026182	RNPC3	95	70.968	ENSSPUG00000008539	-	94	71.313	Sphenodon_punctatus
ENSOGAG00000026182	RNPC3	95	55.285	ENSSPAG00000005633	rnpc3	97	52.642	Stegastes_partitus
ENSOGAG00000026182	RNPC3	100	90.329	ENSSSCG00000037254	RNPC3	100	90.135	Sus_scrofa
ENSOGAG00000026182	RNPC3	87	71.018	ENSTGUG00000004795	-	99	70.133	Taeniopygia_guttata
ENSOGAG00000026182	RNPC3	95	55.061	ENSTNIG00000018963	rnpc3	97	55.061	Tetraodon_nigroviridis
ENSOGAG00000026182	RNPC3	98	93.504	ENSUMAG00000007775	RNPC3	100	93.504	Ursus_maritimus
ENSOGAG00000026182	RNPC3	100	92.664	ENSVVUG00000000331	RNPC3	100	92.664	Vulpes_vulpes
ENSOGAG00000026182	RNPC3	97	51.644	ENSXETG00000025027	rnpc3	99	51.758	Xenopus_tropicalis
ENSOGAG00000026182	RNPC3	96	52.838	ENSXCOG00000005013	rnpc3	98	51.429	Xiphophorus_couchianus
ENSOGAG00000026182	RNPC3	96	53.663	ENSXMAG00000006495	rnpc3	98	53.663	Xiphophorus_maculatus