EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOGAG00000027048 (Gene tree)
Gene ID: 100953518
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 9012 bases
Position: chrGL873529.1:2760972-2769983
Accession: 100953518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000017644	PRP38	PF03371.15	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000034824	-	2985	XM_003784088	ENSOGAP00000017644	547 (aa)	XP_003784136	H0XNF3

Gene Model

Click here to download ENSOGAG00000027048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000027048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000027048	-	81	63.362	ENSATEG00000014482	-	59	84.000	Anabas_testudineus
ENSOGAG00000027048	-	100	95.620	ENSBTAG00000047874	PRPF38B	100	95.255	Bos_taurus
ENSOGAG00000027048	-	100	81.056	ENSCAFG00020010992	-	100	85.246	Canis_lupus_dingo
ENSOGAG00000027048	-	100	95.620	ENSCHIG00000024357	-	100	95.255	Capra_hircus
ENSOGAG00000027048	-	79	92.644	ENSCAPG00000009606	-	98	93.112	Cavia_aperea
ENSOGAG00000027048	-	100	94.526	ENSCPOG00000039545	-	100	93.978	Cavia_porcellus
ENSOGAG00000027048	-	100	95.082	ENSCLAG00000005801	-	100	94.900	Chinchilla_lanigera
ENSOGAG00000027048	-	65	83.569	ENSCHOG00000008972	-	97	82.216	Choloepus_hoffmanni
ENSOGAG00000027048	-	100	84.838	ENSCPBG00000028299	-	100	85.246	Chrysemys_picta_bellii
ENSOGAG00000027048	-	54	54.698	ENSCSAVG00000009443	-	71	73.958	Ciona_savignyi
ENSOGAG00000027048	-	74	66.341	ENSCSEG00000015030	-	59	82.117	Cynoglossus_semilaevis
ENSOGAG00000027048	-	83	93.363	ENSETEG00000014690	-	92	93.735	Echinops_telfairi
ENSOGAG00000027048	-	97	48.983	ENSELUG00000010390	-	50	78.113	Esox_lucius
ENSOGAG00000027048	-	83	85.777	ENSFALG00000002673	-	88	86.593	Ficedula_albicollis
ENSOGAG00000027048	-	94	57.547	ENSGMOG00000012080	-	58	82.784	Gadus_morhua
ENSOGAG00000027048	-	100	85.560	ENSGALG00000001972	-	100	85.064	Gallus_gallus
ENSOGAG00000027048	-	82	61.194	ENSGAFG00000008943	-	59	85.401	Gambusia_affinis
ENSOGAG00000027048	-	100	85.610	ENSGAGG00000001563	-	100	85.428	Gopherus_agassizii
ENSOGAG00000027048	-	100	95.985	ENSHGLG00000016583	PRPF38B	100	95.985	Heterocephalus_glaber_female
ENSOGAG00000027048	-	100	95.803	ENSHGLG00100015525	-	100	95.803	Heterocephalus_glaber_male
ENSOGAG00000027048	-	90	58.918	ENSKMAG00000005540	-	97	59.118	Kryptolebias_marmoratus
ENSOGAG00000027048	-	96	74.816	ENSLACG00000015511	-	94	77.500	Latimeria_chalumnae
ENSOGAG00000027048	-	100	89.781	ENSMOCG00000020285	-	100	91.423	Microtus_ochrogaster
ENSOGAG00000027048	-	81	63.482	ENSMMOG00000011639	-	59	82.909	Mola_mola
ENSOGAG00000027048	-	60	94.277	ENSMODG00000002350	-	100	91.833	Monodelphis_domestica
ENSOGAG00000027048	-	80	64.381	ENSMALG00000019479	-	59	84.364	Monopterus_albus
ENSOGAG00000027048	-	80	94.609	ENSOPRG00000013543	-	81	94.609	Ochotona_princeps
ENSOGAG00000027048	-	81	65.443	ENSONIG00000010129	-	59	84.364	Oreochromis_niloticus
ENSOGAG00000027048	-	90	82.353	ENSOANG00000007343	-	95	90.274	Ornithorhynchus_anatinus
ENSOGAG00000027048	-	82	63.812	ENSORLG00000015621	-	87	92.763	Oryzias_latipes
ENSOGAG00000027048	-	82	63.597	ENSORLG00020016276	-	87	92.763	Oryzias_latipes_hni
ENSOGAG00000027048	-	80	65.275	ENSORLG00015016270	-	71	94.558	Oryzias_latipes_hsok
ENSOGAG00000027048	-	80	65.714	ENSOMEG00000022050	-	87	93.960	Oryzias_melastigma
ENSOGAG00000027048	-	100	94.161	ENSOARG00000018899	-	100	92.883	Ovis_aries
ENSOGAG00000027048	-	97	61.808	ENSPKIG00000004815	-	57	81.373	Paramormyrops_kingsleyae
ENSOGAG00000027048	-	100	84.116	ENSPSIG00000016569	-	100	85.064	Pelodiscus_sinensis
ENSOGAG00000027048	-	80	64.474	ENSPFOG00000004025	-	78	95.238	Poecilia_formosa
ENSOGAG00000027048	-	80	64.474	ENSPLAG00000019842	-	59	85.766	Poecilia_latipinna
ENSOGAG00000027048	-	80	64.474	ENSPMEG00000004807	-	57	85.766	Poecilia_mexicana
ENSOGAG00000027048	-	70	70.332	ENSPREG00000015599	-	80	95.238	Poecilia_reticulata
ENSOGAG00000027048	-	51	84.286	ENSPNAG00000017484	-	53	84.783	Pygocentrus_nattereri
ENSOGAG00000027048	-	100	90.693	ENSRNOG00000020438	Prpf38b	100	91.241	Rattus_norvegicus
ENSOGAG00000027048	-	94	61.989	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSOGAG00000027048	-	80	65.086	ENSSLDG00000023487	-	82	92.763	Seriola_lalandi_dorsalis
ENSOGAG00000027048	-	100	82.909	ENSSPUG00000017742	-	100	82.727	Sphenodon_punctatus
ENSOGAG00000027048	-	77	61.456	ENSTRUG00000011765	-	59	83.696	Takifugu_rubripes
ENSOGAG00000027048	-	50	81.655	ENSTNIG00000015299	-	68	83.696	Tetraodon_nigroviridis
ENSOGAG00000027048	-	93	92.745	ENSTBEG00000007504	-	100	92.745	Tupaia_belangeri
ENSOGAG00000027048	-	100	96.168	ENSTTRG00000006479	-	100	96.168	Tursiops_truncatus
ENSOGAG00000027048	-	99	86.972	ENSVPAG00000005541	-	99	86.789	Vicugna_pacos
ENSOGAG00000027048	-	94	74.806	ENSXETG00000005260	prpf38b	58	83.388	Xenopus_tropicalis
ENSOGAG00000027048	-	82	62.500	ENSXCOG00000008329	-	59	85.401	Xiphophorus_couchianus
ENSOGAG00000027048	-	82	62.500	ENSXMAG00000023831	-	59	85.401	Xiphophorus_maculatus