EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000027852 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 14265 bases
Position: chrGL873532.1:2192455-2206719
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000018982	RRM_1	PF00076.22	2e-55	1	3
ENSOGAP00000018982	RRM_1	PF00076.22	2e-55	2	3
ENSOGAP00000018982	RRM_1	PF00076.22	2e-55	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000028537	NCL-201	2142	-	ENSOGAP00000018982	593 (aa)	-	H0XS90

Gene Model

Click here to download ENSOGAG00000027852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000027852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000027852	NCL	52	32.184	ENSOGAG00000007921	-	61	32.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000027852	NCL	54	89.527	ENSG00000115053	NCL	100	89.527	Homo_sapiens
ENSOGAG00000027852	NCL	83	87.599	ENSAMEG00000016289	NCL	77	87.599	Ailuropoda_melanoleuca
ENSOGAG00000027852	NCL	98	74.061	ENSANAG00000024378	-	75	72.296	Aotus_nancymaae
ENSOGAG00000027852	NCL	65	90.000	ENSBTAG00000026909	-	90	90.377	Bos_taurus
ENSOGAG00000027852	NCL	56	88.934	ENSBTAG00000050728	-	81	88.934	Bos_taurus
ENSOGAG00000027852	NCL	77	87.335	ENSBTAG00000016174	NCL	72	87.335	Bos_taurus
ENSOGAG00000027852	NCL	73	82.308	ENSBTAG00000051320	-	55	79.182	Bos_taurus
ENSOGAG00000027852	NCL	83	88.127	ENSCAFG00000011037	NCL	77	88.127	Canis_familiaris
ENSOGAG00000027852	NCL	62	88.127	ENSCAFG00020023145	NCL	68	88.127	Canis_lupus_dingo
ENSOGAG00000027852	NCL	69	87.335	ENSCHIG00000010894	-	64	87.335	Capra_hircus
ENSOGAG00000027852	NCL	78	96.018	ENSCHIG00000021052	-	81	96.018	Capra_hircus
ENSOGAG00000027852	NCL	91	62.587	ENSCHIG00000012143	-	73	73.879	Capra_hircus
ENSOGAG00000027852	NCL	89	66.972	ENSTSYG00000036886	-	61	75.661	Carlito_syrichta
ENSOGAG00000027852	NCL	70	51.872	ENSTSYG00000029779	-	65	74.737	Carlito_syrichta
ENSOGAG00000027852	NCL	83	86.486	ENSCAPG00000009405	NCL	64	86.486	Cavia_aperea
ENSOGAG00000027852	NCL	84	86.016	ENSCPOG00000001034	NCL	73	86.016	Cavia_porcellus
ENSOGAG00000027852	NCL	77	88.127	ENSCCAG00000021040	-	74	88.127	Cebus_capucinus
ENSOGAG00000027852	NCL	88	88.945	ENSCCAG00000000551	-	64	89.055	Cebus_capucinus
ENSOGAG00000027852	NCL	84	86.016	ENSCLAG00000013080	NCL	73	86.016	Chinchilla_lanigera
ENSOGAG00000027852	NCL	63	88.158	ENSCSAG00000006660	NCL	95	83.144	Chlorocebus_sabaeus
ENSOGAG00000027852	NCL	61	75.543	ENSCHOG00000012860	NCL	78	75.668	Choloepus_hoffmanni
ENSOGAG00000027852	NCL	59	100.000	ENSCANG00000036756	NCL	80	100.000	Colobus_angolensis_palliatus
ENSOGAG00000027852	NCL	76	82.058	ENSCGRG00000017894	-	61	82.058	Cricetulus_griseus_crigri
ENSOGAG00000027852	NCL	84	85.263	ENSDNOG00000010783	-	77	85.263	Dasypus_novemcinctus
ENSOGAG00000027852	NCL	62	76.579	ENSDNOG00000046347	-	91	59.219	Dasypus_novemcinctus
ENSOGAG00000027852	NCL	63	82.368	ENSETEG00000018937	-	60	82.322	Echinops_telfairi
ENSOGAG00000027852	NCL	62	81.963	ENSETEG00000014756	-	86	82.058	Echinops_telfairi
ENSOGAG00000027852	NCL	72	56.751	ENSETEG00000008553	-	80	58.684	Echinops_telfairi
ENSOGAG00000027852	NCL	88	97.727	ENSEASG00005008488	NCL	74	87.795	Equus_asinus_asinus
ENSOGAG00000027852	NCL	83	87.335	ENSECAG00000021868	NCL	77	87.335	Equus_caballus
ENSOGAG00000027852	NCL	62	81.794	ENSEEUG00000005913	NCL	60	81.794	Erinaceus_europaeus
ENSOGAG00000027852	NCL	83	88.127	ENSFCAG00000027622	NCL	77	88.127	Felis_catus
ENSOGAG00000027852	NCL	51	99.545	ENSGGOG00000004300	NCL	73	92.308	Gorilla_gorilla
ENSOGAG00000027852	NCL	90	60.062	ENSLAFG00000013061	NCL	77	76.903	Loxodonta_africana
ENSOGAG00000027852	NCL	58	99.545	ENSMMUG00000018094	NCL	91	91.093	Macaca_mulatta
ENSOGAG00000027852	NCL	63	81.405	ENSMICG00000029975	-	86	79.216	Microcebus_murinus
ENSOGAG00000027852	NCL	84	87.863	ENSMLUG00000014547	NCL	60	87.863	Myotis_lucifugus
ENSOGAG00000027852	NCL	91	62.614	ENSNGAG00000002454	-	65	83.641	Nannospalax_galili
ENSOGAG00000027852	NCL	62	72.327	ENSNLEG00000014107	-	66	72.327	Nomascus_leucogenys
ENSOGAG00000027852	NCL	65	54.682	ENSODEG00000007803	-	60	54.682	Octodon_degus
ENSOGAG00000027852	NCL	100	76.370	ENSODEG00000002441	-	92	75.000	Octodon_degus
ENSOGAG00000027852	NCL	84	81.963	ENSODEG00000003281	-	73	82.011	Octodon_degus
ENSOGAG00000027852	NCL	90	67.925	ENSODEG00000002748	-	91	67.521	Octodon_degus
ENSOGAG00000027852	NCL	91	64.032	ENSOCUG00000004312	NCL	91	65.484	Oryctolagus_cuniculus
ENSOGAG00000027852	NCL	62	71.353	ENSOARG00000004072	-	61	71.504	Ovis_aries
ENSOGAG00000027852	NCL	76	86.387	ENSOARG00000020709	-	73	86.387	Ovis_aries
ENSOGAG00000027852	NCL	51	99.545	ENSPPAG00000011619	NCL	73	92.308	Pan_paniscus
ENSOGAG00000027852	NCL	83	87.863	ENSPPRG00000012603	NCL	77	87.863	Panthera_pardus
ENSOGAG00000027852	NCL	82	87.863	ENSPTIG00000010393	NCL	77	87.863	Panthera_tigris_altaica
ENSOGAG00000027852	NCL	51	99.545	ENSPTRG00000013025	NCL	73	92.713	Pan_troglodytes
ENSOGAG00000027852	NCL	77	82.058	ENSRNOG00000018273	Ncl	73	82.058	Rattus_norvegicus
ENSOGAG00000027852	NCL	71	97.232	ENSRBIG00000035396	-	81	95.302	Rhinopithecus_bieti
ENSOGAG00000027852	NCL	76	85.752	ENSRBIG00000037525	-	68	85.752	Rhinopithecus_bieti
ENSOGAG00000027852	NCL	92	84.228	ENSRROG00000036103	-	86	98.864	Rhinopithecus_roxellana
ENSOGAG00000027852	NCL	92	97.865	ENSRROG00000028756	-	83	97.865	Rhinopithecus_roxellana
ENSOGAG00000027852	NCL	75	82.620	ENSSBOG00000027549	-	83	82.353	Saimiri_boliviensis_boliviensis
ENSOGAG00000027852	NCL	83	87.071	ENSSSCG00000016275	NCL	72	87.071	Sus_scrofa
ENSOGAG00000027852	NCL	62	76.253	ENSTBEG00000001546	-	65	76.253	Tupaia_belangeri
ENSOGAG00000027852	NCL	84	85.979	ENSTTRG00000009094	NCL	78	85.979	Tursiops_truncatus
ENSOGAG00000027852	NCL	81	81.855	ENSUAMG00000005639	NCL	75	87.599	Ursus_americanus
ENSOGAG00000027852	NCL	83	87.599	ENSUMAG00000015789	NCL	78	87.599	Ursus_maritimus
ENSOGAG00000027852	NCL	70	75.148	ENSVPAG00000001796	NCL	68	75.148	Vicugna_pacos
ENSOGAG00000027852	NCL	91	70.240	ENSVVUG00000025564	NCL	56	87.599	Vulpes_vulpes