EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000027905 (Gene tree)
Gene ID: 100945438
Gene Symbol: PATZ1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 19694 bases
Position: chrGL873813.1:834018-853711
Accession: 100945438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000016443	zf-C2H2	PF00096.26	1.3e-25	1	5
ENSOGAP00000016443	zf-C2H2	PF00096.26	1.3e-25	2	5
ENSOGAP00000016443	zf-C2H2	PF00096.26	1.3e-25	3	5
ENSOGAP00000016443	zf-C2H2	PF00096.26	1.3e-25	4	5
ENSOGAP00000016443	zf-C2H2	PF00096.26	1.3e-25	5	5
ENSOGAP00000016443	zf-met	PF12874.7	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000033962	PATZ1-201	2295	-	ENSOGAP00000016443	687 (aa)	XP_003803389	H0XK03

Gene Model

Click here to download ENSOGAG00000027905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000027905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000027905	PATZ1	55	32.314	ENSOGAG00000029343	-	74	30.568
ENSOGAG00000027905	PATZ1	56	34.498	ENSOGAG00000025289	-	79	34.498
ENSOGAG00000027905	PATZ1	52	36.190	ENSOGAG00000012069	ZNF225	77	36.190
ENSOGAG00000027905	PATZ1	55	34.940	ENSOGAG00000024538	-	58	34.507
ENSOGAG00000027905	PATZ1	51	36.986	ENSOGAG00000027908	BCL6B	56	46.429
ENSOGAG00000027905	PATZ1	73	36.232	ENSOGAG00000009683	ZBTB14	90	36.232
ENSOGAG00000027905	PATZ1	52	39.024	ENSOGAG00000034730	ZNF628	58	39.024
ENSOGAG00000027905	PATZ1	62	30.769	ENSOGAG00000029772	-	94	30.769
ENSOGAG00000027905	PATZ1	55	30.508	ENSOGAG00000004779	ZNF564	91	30.579
ENSOGAG00000027905	PATZ1	52	36.257	ENSOGAG00000001561	ZNF425	77	36.257
ENSOGAG00000027905	PATZ1	57	33.333	ENSOGAG00000015518	ZBTB24	51	33.333
ENSOGAG00000027905	PATZ1	51	37.037	ENSOGAG00000027487	ZNF236	57	37.037
ENSOGAG00000027905	PATZ1	50	32.178	ENSOGAG00000014983	ZNF81	51	32.178
ENSOGAG00000027905	PATZ1	52	37.059	ENSOGAG00000025131	ZNF121	64	37.059
ENSOGAG00000027905	PATZ1	54	30.994	ENSOGAG00000014360	ZNF829	100	37.589
ENSOGAG00000027905	PATZ1	53	32.900	ENSOGAG00000009996	PRDM5	81	32.900
ENSOGAG00000027905	PATZ1	53	31.761	ENSOGAG00000015980	-	98	31.761
ENSOGAG00000027905	PATZ1	87	30.682	ENSOGAG00000028389	GZF1	82	30.682
ENSOGAG00000027905	PATZ1	56	30.435	ENSOGAG00000002111	-	87	30.435
ENSOGAG00000027905	PATZ1	53	33.529	ENSOGAG00000001902	ZFP1	56	33.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000027905	PATZ1	100	99.272	ENSG00000100105	PATZ1	100	99.272	Homo_sapiens
ENSOGAG00000027905	PATZ1	100	53.867	ENSAPOG00000018447	patz1	100	54.144	Acanthochromis_polyacanthus
ENSOGAG00000027905	PATZ1	100	99.272	ENSAMEG00000007074	PATZ1	100	99.272	Ailuropoda_melanoleuca
ENSOGAG00000027905	PATZ1	100	59.091	ENSACIG00000016779	patz1	100	58.890	Amphilophus_citrinellus
ENSOGAG00000027905	PATZ1	100	57.843	ENSAPEG00000013354	patz1	100	57.983	Amphiprion_percula
ENSOGAG00000027905	PATZ1	100	61.307	ENSATEG00000011260	patz1	100	58.440	Anabas_testudineus
ENSOGAG00000027905	PATZ1	85	91.610	ENSAPLG00000003934	PATZ1	99	91.438	Anas_platyrhynchos
ENSOGAG00000027905	PATZ1	100	99.272	ENSANAG00000029603	PATZ1	100	99.272	Aotus_nancymaae
ENSOGAG00000027905	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSOGAG00000027905	PATZ1	100	99.272	ENSBTAG00000005478	PATZ1	100	99.272	Bos_taurus
ENSOGAG00000027905	PATZ1	100	99.272	ENSCJAG00000010978	PATZ1	100	99.272	Callithrix_jacchus
ENSOGAG00000027905	PATZ1	100	99.418	ENSCAFG00000013087	PATZ1	100	99.418	Canis_familiaris
ENSOGAG00000027905	PATZ1	100	98.836	ENSCHIG00000020203	PATZ1	100	98.836	Capra_hircus
ENSOGAG00000027905	PATZ1	100	99.418	ENSTSYG00000033183	PATZ1	100	99.418	Carlito_syrichta
ENSOGAG00000027905	PATZ1	100	99.272	ENSCCAG00000028772	PATZ1	100	99.272	Cebus_capucinus
ENSOGAG00000027905	PATZ1	100	99.272	ENSCATG00000006101	PATZ1	100	99.272	Cercocebus_atys
ENSOGAG00000027905	PATZ1	100	88.986	ENSCPBG00000011277	PATZ1	100	89.130	Chrysemys_picta_bellii
ENSOGAG00000027905	PATZ1	100	99.272	ENSCANG00000024972	PATZ1	100	99.272	Colobus_angolensis_palliatus
ENSOGAG00000027905	PATZ1	100	96.798	ENSCGRG00001004071	Patz1	100	96.798	Cricetulus_griseus_chok1gshd
ENSOGAG00000027905	PATZ1	93	97.512	ENSCGRG00000004814	Patz1	100	97.512	Cricetulus_griseus_crigri
ENSOGAG00000027905	PATZ1	100	55.385	ENSCSEG00000001385	patz1	100	55.278	Cynoglossus_semilaevis
ENSOGAG00000027905	PATZ1	100	58.650	ENSCVAG00000007684	patz1	100	58.592	Cyprinodon_variegatus
ENSOGAG00000027905	PATZ1	97	55.571	ENSDARG00000076584	patz1	98	55.143	Danio_rerio
ENSOGAG00000027905	PATZ1	90	98.869	ENSDNOG00000003183	PATZ1	100	98.869	Dasypus_novemcinctus
ENSOGAG00000027905	PATZ1	100	99.127	ENSDORG00000023834	Patz1	100	99.127	Dipodomys_ordii
ENSOGAG00000027905	PATZ1	100	99.272	ENSECAG00000025030	PATZ1	100	99.272	Equus_caballus
ENSOGAG00000027905	PATZ1	100	60.309	ENSELUG00000002333	patz1	100	60.139	Esox_lucius
ENSOGAG00000027905	PATZ1	100	99.418	ENSFCAG00000030253	PATZ1	100	99.418	Felis_catus
ENSOGAG00000027905	PATZ1	86	91.864	ENSFALG00000007450	PATZ1	99	91.823	Ficedula_albicollis
ENSOGAG00000027905	PATZ1	96	94.570	ENSFDAG00000005614	PATZ1	100	93.665	Fukomys_damarensis
ENSOGAG00000027905	PATZ1	100	57.423	ENSFHEG00000014755	patz1	100	57.003	Fundulus_heteroclitus
ENSOGAG00000027905	PATZ1	98	55.230	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSOGAG00000027905	PATZ1	100	88.633	ENSGALG00000006934	PATZ1	100	88.777	Gallus_gallus
ENSOGAG00000027905	PATZ1	100	54.357	ENSGAFG00000010053	patz1	100	54.495	Gambusia_affinis
ENSOGAG00000027905	PATZ1	85	91.938	ENSGAGG00000003214	PATZ1	100	91.767	Gopherus_agassizii
ENSOGAG00000027905	PATZ1	100	99.418	ENSGGOG00000017171	PATZ1	100	99.418	Gorilla_gorilla
ENSOGAG00000027905	PATZ1	100	54.735	ENSHCOG00000017644	patz1	93	54.596	Hippocampus_comes
ENSOGAG00000027905	PATZ1	97	54.339	ENSIPUG00000017653	patz1	97	54.054	Ictalurus_punctatus
ENSOGAG00000027905	PATZ1	100	98.981	ENSSTOG00000020707	PATZ1	100	98.981	Ictidomys_tridecemlineatus
ENSOGAG00000027905	PATZ1	100	96.662	ENSJJAG00000015259	Patz1	100	96.662	Jaculus_jaculus
ENSOGAG00000027905	PATZ1	100	57.812	ENSKMAG00000008157	patz1	100	57.768	Kryptolebias_marmoratus
ENSOGAG00000027905	PATZ1	100	98.399	ENSLAFG00000002317	PATZ1	100	98.399	Loxodonta_africana
ENSOGAG00000027905	PATZ1	100	99.127	ENSMFAG00000040968	PATZ1	100	99.127	Macaca_fascicularis
ENSOGAG00000027905	PATZ1	100	99.127	ENSMNEG00000037588	PATZ1	100	99.127	Macaca_nemestrina
ENSOGAG00000027905	PATZ1	100	99.272	ENSMLEG00000030938	PATZ1	100	99.272	Mandrillus_leucophaeus
ENSOGAG00000027905	PATZ1	100	57.007	ENSMAMG00000023652	patz1	100	57.143	Mastacembelus_armatus
ENSOGAG00000027905	PATZ1	85	88.034	ENSMGAG00000008439	PATZ1	100	87.863	Meleagris_gallopavo
ENSOGAG00000027905	PATZ1	100	98.544	ENSMAUG00000004129	Patz1	100	98.544	Mesocricetus_auratus
ENSOGAG00000027905	PATZ1	100	99.272	ENSMICG00000005430	PATZ1	100	99.272	Microcebus_murinus
ENSOGAG00000027905	PATZ1	100	98.399	ENSMOCG00000014488	Patz1	100	98.399	Microtus_ochrogaster
ENSOGAG00000027905	PATZ1	81	55.044	ENSMMOG00000021679	patz1	100	54.867	Mola_mola
ENSOGAG00000027905	PATZ1	100	57.143	ENSMALG00000021172	patz1	100	56.860	Monopterus_albus
ENSOGAG00000027905	PATZ1	100	98.399	MGP_CAROLIEiJ_G0016007	Patz1	100	98.399	Mus_caroli
ENSOGAG00000027905	PATZ1	100	98.544	ENSMUSG00000020453	Patz1	100	98.544	Mus_musculus
ENSOGAG00000027905	PATZ1	100	98.544	MGP_PahariEiJ_G0016884	Patz1	100	98.544	Mus_pahari
ENSOGAG00000027905	PATZ1	100	98.544	MGP_SPRETEiJ_G0016846	Patz1	100	98.544	Mus_spretus
ENSOGAG00000027905	PATZ1	100	99.127	ENSMLUG00000009942	PATZ1	100	99.127	Myotis_lucifugus
ENSOGAG00000027905	PATZ1	100	98.836	ENSNGAG00000010268	Patz1	100	98.836	Nannospalax_galili
ENSOGAG00000027905	PATZ1	100	58.989	ENSNBRG00000016032	patz1	100	58.650	Neolamprologus_brichardi
ENSOGAG00000027905	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSOGAG00000027905	PATZ1	100	98.253	ENSODEG00000003589	PATZ1	100	98.253	Octodon_degus
ENSOGAG00000027905	PATZ1	100	55.510	ENSONIG00000004248	patz1	100	55.310	Oreochromis_niloticus
ENSOGAG00000027905	PATZ1	100	93.324	ENSOANG00000014654	PATZ1	100	93.614	Ornithorhynchus_anatinus
ENSOGAG00000027905	PATZ1	100	56.871	ENSORLG00020010937	patz1	100	56.735	Oryzias_latipes_hni
ENSOGAG00000027905	PATZ1	100	56.948	ENSORLG00015007396	patz1	100	56.812	Oryzias_latipes_hsok
ENSOGAG00000027905	PATZ1	100	54.103	ENSOMEG00000006636	patz1	100	54.103	Oryzias_melastigma
ENSOGAG00000027905	PATZ1	100	99.418	ENSPPAG00000033227	PATZ1	100	99.418	Pan_paniscus
ENSOGAG00000027905	PATZ1	100	99.418	ENSPPRG00000001573	PATZ1	100	99.418	Panthera_pardus
ENSOGAG00000027905	PATZ1	86	99.494	ENSPTIG00000007937	PATZ1	91	99.494	Panthera_tigris_altaica
ENSOGAG00000027905	PATZ1	100	99.418	ENSPTRG00000014268	PATZ1	100	99.418	Pan_troglodytes
ENSOGAG00000027905	PATZ1	100	99.272	ENSPANG00000006821	PATZ1	100	99.272	Papio_anubis
ENSOGAG00000027905	PATZ1	100	62.079	ENSPKIG00000019584	patz1	100	61.798	Paramormyrops_kingsleyae
ENSOGAG00000027905	PATZ1	58	95.707	ENSPSIG00000011562	-	100	95.707	Pelodiscus_sinensis
ENSOGAG00000027905	PATZ1	60	83.535	ENSPSIG00000016553	-	91	83.293	Pelodiscus_sinensis
ENSOGAG00000027905	PATZ1	100	56.742	ENSPMGG00000010196	patz1	100	56.742	Periophthalmus_magnuspinnatus
ENSOGAG00000027905	PATZ1	100	98.399	ENSPEMG00000005321	Patz1	100	98.399	Peromyscus_maniculatus_bairdii
ENSOGAG00000027905	PATZ1	100	54.144	ENSPLAG00000010425	patz1	100	57.237	Poecilia_latipinna
ENSOGAG00000027905	PATZ1	100	54.219	ENSPMEG00000000255	patz1	100	54.357	Poecilia_mexicana
ENSOGAG00000027905	PATZ1	100	57.044	ENSPREG00000002440	patz1	100	57.182	Poecilia_reticulata
ENSOGAG00000027905	PATZ1	100	99.272	ENSPPYG00000011732	PATZ1	100	99.272	Pongo_abelii
ENSOGAG00000027905	PATZ1	100	99.127	ENSPCOG00000019729	PATZ1	100	99.127	Propithecus_coquereli
ENSOGAG00000027905	PATZ1	100	99.563	ENSPVAG00000001749	PATZ1	100	99.563	Pteropus_vampyrus
ENSOGAG00000027905	PATZ1	100	59.524	ENSPNYG00000013542	patz1	100	59.187	Pundamilia_nyererei
ENSOGAG00000027905	PATZ1	84	60.130	ENSPNAG00000017222	patz1	99	59.164	Pygocentrus_nattereri
ENSOGAG00000027905	PATZ1	100	99.272	ENSRBIG00000044231	PATZ1	100	99.272	Rhinopithecus_bieti
ENSOGAG00000027905	PATZ1	100	99.272	ENSRROG00000037155	PATZ1	100	99.272	Rhinopithecus_roxellana
ENSOGAG00000027905	PATZ1	100	99.272	ENSSBOG00000003894	PATZ1	100	99.272	Saimiri_boliviensis_boliviensis
ENSOGAG00000027905	PATZ1	73	80.788	ENSSFOG00015013244	patz1	78	80.788	Scleropages_formosus
ENSOGAG00000027905	PATZ1	100	87.055	ENSSPUG00000015298	PATZ1	100	86.629	Sphenodon_punctatus
ENSOGAG00000027905	PATZ1	85	99.141	ENSSSCG00000010027	PATZ1	100	99.141	Sus_scrofa
ENSOGAG00000027905	PATZ1	100	58.516	ENSTRUG00000015366	patz1	100	57.931	Takifugu_rubripes
ENSOGAG00000027905	PATZ1	100	99.272	ENSTTRG00000010279	PATZ1	100	99.272	Tursiops_truncatus
ENSOGAG00000027905	PATZ1	100	92.868	ENSUAMG00000015014	PATZ1	100	92.868	Ursus_americanus
ENSOGAG00000027905	PATZ1	100	72.899	ENSXETG00000004190	patz1	100	72.174	Xenopus_tropicalis
ENSOGAG00000027905	PATZ1	100	54.495	ENSXMAG00000015531	patz1	100	54.633	Xiphophorus_maculatus