EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000028946 (Gene tree)
Gene ID: -
Gene Symbol: PCBP1
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 1071 bases
Position: chrGL873587.1:5754052-5755122
Accession: 8647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000018442	KH_1	PF00013.29	9.1e-52	1	3
ENSOGAP00000018442	KH_1	PF00013.29	9.1e-52	2	3
ENSOGAP00000018442	KH_1	PF00013.29	9.1e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000033504	PCBP1-201	1041	-	ENSOGAP00000018442	346 (aa)	-	H0XQQ0

Gene Model

Click here to download ENSOGAG00000028946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000028946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000028946	PCBP1	72	40.541	ENSOGAG00000025938	NOVA1	57	40.541
ENSOGAG00000028946	PCBP1	99	67.218	ENSOGAG00000008044	-	99	67.218
ENSOGAG00000028946	PCBP1	94	31.016	ENSOGAG00000007555	FUBP3	65	31.016
ENSOGAG00000028946	PCBP1	98	33.696	ENSOGAG00000010577	IGF2BP2	76	33.696
ENSOGAG00000028946	PCBP1	98	54.810	ENSOGAG00000032384	PCBP4	77	54.810
ENSOGAG00000028946	PCBP1	95	30.657	ENSOGAG00000017159	IGF2BP3	59	30.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000028946	PCBP1	100	97.191	ENSG00000169564	PCBP1	100	97.191	Homo_sapiens
ENSOGAG00000028946	PCBP1	100	100.000	ENSAMEG00000016094	PCBP1	100	100.000	Ailuropoda_melanoleuca
ENSOGAG00000028946	PCBP1	100	86.236	ENSANAG00000023938	-	100	86.236	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	79	91.519	ENSANAG00000019364	-	100	91.519	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	97	93.353	ENSANAG00000026989	-	99	93.353	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	88	90.196	ENSANAG00000027108	-	100	90.196	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	100	85.674	ENSANAG00000026077	-	100	85.674	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	79	94.505	ENSANAG00000022494	-	100	94.505	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	100	88.150	ENSANAG00000033377	-	100	88.150	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	79	92.226	ENSANAG00000031745	-	100	92.226	Aotus_nancymaae
ENSOGAG00000028946	PCBP1	91	96.914	ENSBTAG00000008985	PCBP1	99	96.914	Bos_taurus
ENSOGAG00000028946	PCBP1	100	91.573	ENSCJAG00000038388	-	95	91.573	Callithrix_jacchus
ENSOGAG00000028946	PCBP1	100	96.910	ENSCAFG00000003326	PCBP1	100	96.910	Canis_familiaris
ENSOGAG00000028946	PCBP1	100	97.191	ENSCHIG00000007923	PCBP1	100	97.191	Capra_hircus
ENSOGAG00000028946	PCBP1	100	96.629	ENSTSYG00000027848	PCBP1	100	96.629	Carlito_syrichta
ENSOGAG00000028946	PCBP1	100	97.191	ENSCPOG00000013511	PCBP1	100	97.191	Cavia_porcellus
ENSOGAG00000028946	PCBP1	100	88.764	ENSCCAG00000029186	-	98	88.764	Cebus_capucinus
ENSOGAG00000028946	PCBP1	100	97.191	ENSCCAG00000019842	-	100	97.191	Cebus_capucinus
ENSOGAG00000028946	PCBP1	100	97.191	ENSCATG00000015029	PCBP1	100	97.191	Cercocebus_atys
ENSOGAG00000028946	PCBP1	100	96.629	ENSCLAG00000017909	PCBP1	100	96.629	Chinchilla_lanigera
ENSOGAG00000028946	PCBP1	100	97.191	ENSCSAG00000019441	PCBP1	100	97.191	Chlorocebus_sabaeus
ENSOGAG00000028946	PCBP1	71	81.176	ENSCANG00000033810	-	87	81.176	Colobus_angolensis_palliatus
ENSOGAG00000028946	PCBP1	100	97.191	ENSCANG00000018039	-	100	97.191	Colobus_angolensis_palliatus
ENSOGAG00000028946	PCBP1	100	87.079	ENSCANG00000032470	-	94	87.079	Colobus_angolensis_palliatus
ENSOGAG00000028946	PCBP1	100	97.191	ENSCGRG00001015078	Pcbp1	100	97.191	Cricetulus_griseus_chok1gshd
ENSOGAG00000028946	PCBP1	100	97.191	ENSCGRG00000018899	Pcbp1	100	97.191	Cricetulus_griseus_crigri
ENSOGAG00000028946	PCBP1	79	95.789	ENSDNOG00000036372	PCBP1	99	95.789	Dasypus_novemcinctus
ENSOGAG00000028946	PCBP1	100	97.191	ENSDORG00000008216	Pcbp1	100	97.191	Dipodomys_ordii
ENSOGAG00000028946	PCBP1	100	97.191	ENSFCAG00000022238	PCBP1	100	97.191	Felis_catus
ENSOGAG00000028946	PCBP1	100	96.910	ENSFDAG00000019637	PCBP1	100	96.910	Fukomys_damarensis
ENSOGAG00000028946	PCBP1	100	97.191	ENSGGOG00000028130	PCBP1	100	97.191	Gorilla_gorilla
ENSOGAG00000028946	PCBP1	100	94.944	ENSHGLG00000020243	-	100	94.944	Heterocephalus_glaber_female
ENSOGAG00000028946	PCBP1	100	96.910	ENSHGLG00000020345	Pcbp1	100	96.910	Heterocephalus_glaber_female
ENSOGAG00000028946	PCBP1	100	96.910	ENSHGLG00100019761	Pcbp1	100	96.910	Heterocephalus_glaber_male
ENSOGAG00000028946	PCBP1	100	96.629	ENSHGLG00100019620	-	100	96.629	Heterocephalus_glaber_male
ENSOGAG00000028946	PCBP1	100	97.191	ENSSTOG00000026002	PCBP1	100	97.191	Ictidomys_tridecemlineatus
ENSOGAG00000028946	PCBP1	100	97.191	ENSJJAG00000000737	Pcbp1	100	97.191	Jaculus_jaculus
ENSOGAG00000028946	PCBP1	95	91.131	ENSMFAG00000003400	PCBP1	100	91.131	Macaca_fascicularis
ENSOGAG00000028946	PCBP1	100	97.191	ENSMMUG00000038295	PCBP1	100	97.191	Macaca_mulatta
ENSOGAG00000028946	PCBP1	100	97.191	ENSMNEG00000002934	PCBP1	100	97.191	Macaca_nemestrina
ENSOGAG00000028946	PCBP1	100	97.191	ENSMLEG00000027389	PCBP1	100	97.191	Mandrillus_leucophaeus
ENSOGAG00000028946	PCBP1	100	96.910	ENSMAUG00000009843	Pcbp1	100	96.910	Mesocricetus_auratus
ENSOGAG00000028946	PCBP1	100	97.191	ENSMICG00000038221	PCBP1	100	97.191	Microcebus_murinus
ENSOGAG00000028946	PCBP1	100	97.191	ENSMOCG00000008102	Pcbp1	100	97.191	Microtus_ochrogaster
ENSOGAG00000028946	PCBP1	100	97.191	MGP_CAROLIEiJ_G0028598	Pcbp1	100	97.191	Mus_caroli
ENSOGAG00000028946	PCBP1	100	97.191	ENSMUSG00000051695	Pcbp1	100	97.191	Mus_musculus
ENSOGAG00000028946	PCBP1	100	97.191	MGP_PahariEiJ_G0022335	Pcbp1	100	97.191	Mus_pahari
ENSOGAG00000028946	PCBP1	100	97.191	MGP_SPRETEiJ_G0029609	Pcbp1	100	97.191	Mus_spretus
ENSOGAG00000028946	PCBP1	100	100.000	ENSMPUG00000007175	PCBP1	100	100.000	Mustela_putorius_furo
ENSOGAG00000028946	PCBP1	100	97.191	ENSMLUG00000014173	PCBP1	100	97.191	Myotis_lucifugus
ENSOGAG00000028946	PCBP1	100	97.191	ENSNGAG00000011957	-	100	97.191	Nannospalax_galili
ENSOGAG00000028946	PCBP1	100	97.191	ENSNGAG00000014909	-	100	97.191	Nannospalax_galili
ENSOGAG00000028946	PCBP1	100	97.191	ENSNLEG00000018722	PCBP1	100	97.191	Nomascus_leucogenys
ENSOGAG00000028946	PCBP1	100	80.618	ENSODEG00000000263	PCBP1	100	80.618	Octodon_degus
ENSOGAG00000028946	PCBP1	100	97.191	ENSOCUG00000003634	PCBP1	100	97.191	Oryctolagus_cuniculus
ENSOGAG00000028946	PCBP1	100	97.191	ENSOARG00000019516	PCBP1	100	97.191	Ovis_aries
ENSOGAG00000028946	PCBP1	100	95.225	ENSPPAG00000036116	PCBP1	99	95.798	Pan_paniscus
ENSOGAG00000028946	PCBP1	100	97.191	ENSPPRG00000020533	PCBP1	100	97.191	Panthera_pardus
ENSOGAG00000028946	PCBP1	100	97.191	ENSPTIG00000007318	PCBP1	100	97.191	Panthera_tigris_altaica
ENSOGAG00000028946	PCBP1	100	97.191	ENSPTRG00000012025	PCBP1	100	97.191	Pan_troglodytes
ENSOGAG00000028946	PCBP1	100	97.191	ENSPANG00000011314	PCBP1	100	97.191	Papio_anubis
ENSOGAG00000028946	PCBP1	100	97.191	ENSPPYG00000012328	PCBP1	100	97.191	Pongo_abelii
ENSOGAG00000028946	PCBP1	100	97.191	ENSPCOG00000026934	PCBP1	100	97.191	Propithecus_coquereli
ENSOGAG00000028946	PCBP1	100	96.348	ENSRROG00000009684	-	95	96.348	Rhinopithecus_roxellana
ENSOGAG00000028946	PCBP1	93	95.783	ENSRROG00000012514	-	100	95.783	Rhinopithecus_roxellana
ENSOGAG00000028946	PCBP1	100	85.838	ENSSBOG00000035309	-	94	85.838	Saimiri_boliviensis_boliviensis
ENSOGAG00000028946	PCBP1	100	97.191	ENSSSCG00000027224	PCBP1	100	97.191	Sus_scrofa
ENSOGAG00000028946	PCBP1	90	96.594	ENSVVUG00000028033	PCBP1	99	96.594	Vulpes_vulpes