EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000032369 (Gene tree)
Gene ID: 100947417
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Plus strand
Length: 90648 bases
Position: chrGL873529.1:17478761-17569408
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000021595	ResIII	PF04851.15	3.2e-11	1	1
ENSOGAP00000021595	DEAD	PF00270.29	4.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000034051	HFM1-201	3710	-	ENSOGAP00000021595	1227 (aa)	-	H0XZQ2

Gene Model

Click here to download ENSOGAG00000032369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000032369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000032369	HFM1	68	31.304	ENSOGAG00000006879	SNRNP200	72	32.228
ENSOGAG00000032369	HFM1	61	37.413	ENSOGAG00000009875	ASCC3	63	37.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000032369	HFM1	100	88.762	ENSG00000162669	HFM1	100	91.304	Homo_sapiens
ENSOGAG00000032369	HFM1	68	65.711	ENSAPOG00000005304	hfm1	100	65.711	Acanthochromis_polyacanthus
ENSOGAG00000032369	HFM1	99	88.264	ENSAMEG00000000432	HFM1	85	88.264	Ailuropoda_melanoleuca
ENSOGAG00000032369	HFM1	76	63.578	ENSACIG00000021553	hfm1	83	63.578	Amphilophus_citrinellus
ENSOGAG00000032369	HFM1	68	66.108	ENSAOCG00000022839	hfm1	100	66.108	Amphiprion_ocellaris
ENSOGAG00000032369	HFM1	68	65.868	ENSAPEG00000014316	hfm1	100	65.868	Amphiprion_percula
ENSOGAG00000032369	HFM1	78	64.426	ENSATEG00000019181	hfm1	80	63.348	Anabas_testudineus
ENSOGAG00000032369	HFM1	99	65.403	ENSAPLG00000013639	HFM1	85	65.403	Anas_platyrhynchos
ENSOGAG00000032369	HFM1	100	85.122	ENSANAG00000029513	HFM1	85	85.122	Aotus_nancymaae
ENSOGAG00000032369	HFM1	76	63.597	ENSACLG00000009033	hfm1	97	64.994	Astatotilapia_calliptera
ENSOGAG00000032369	HFM1	99	55.156	ENSAMXG00000006108	hfm1	83	55.156	Astyanax_mexicanus
ENSOGAG00000032369	HFM1	100	85.447	ENSBTAG00000020856	HFM1	85	85.447	Bos_taurus
ENSOGAG00000032369	HFM1	100	86.889	ENSCJAG00000001843	HFM1	85	86.889	Callithrix_jacchus
ENSOGAG00000032369	HFM1	99	87.031	ENSCAFG00000020187	HFM1	85	87.031	Canis_familiaris
ENSOGAG00000032369	HFM1	100	87.785	ENSTSYG00000014250	HFM1	86	87.785	Carlito_syrichta
ENSOGAG00000032369	HFM1	100	82.587	ENSCPOG00000007421	HFM1	87	82.587	Cavia_porcellus
ENSOGAG00000032369	HFM1	100	86.808	ENSCCAG00000033206	HFM1	85	86.808	Cebus_capucinus
ENSOGAG00000032369	HFM1	100	88.436	ENSCATG00000030987	HFM1	85	88.436	Cercocebus_atys
ENSOGAG00000032369	HFM1	100	83.727	ENSCLAG00000005173	HFM1	83	83.727	Chinchilla_lanigera
ENSOGAG00000032369	HFM1	63	93.421	ENSCHOG00000011824	-	60	93.421	Choloepus_hoffmanni
ENSOGAG00000032369	HFM1	57	53.268	ENSCSAVG00000005094	-	100	53.268	Ciona_savignyi
ENSOGAG00000032369	HFM1	99	74.207	ENSCGRG00001016995	Hfm1	85	74.191	Cricetulus_griseus_chok1gshd
ENSOGAG00000032369	HFM1	99	78.934	ENSCGRG00000017181	Hfm1	85	78.892	Cricetulus_griseus_crigri
ENSOGAG00000032369	HFM1	76	62.917	ENSCSEG00000017659	hfm1	87	62.917	Cynoglossus_semilaevis
ENSOGAG00000032369	HFM1	58	68.811	ENSCVAG00000005075	hfm1	86	68.811	Cyprinodon_variegatus
ENSOGAG00000032369	HFM1	89	56.357	ENSDARG00000104288	hfm1	96	56.357	Danio_rerio
ENSOGAG00000032369	HFM1	100	84.146	ENSDNOG00000004776	HFM1	83	84.146	Dasypus_novemcinctus
ENSOGAG00000032369	HFM1	99	79.823	ENSDORG00000014661	Hfm1	85	79.823	Dipodomys_ordii
ENSOGAG00000032369	HFM1	77	87.924	ENSEASG00005015424	HFM1	98	80.217	Equus_asinus_asinus
ENSOGAG00000032369	HFM1	100	87.561	ENSECAG00000024039	HFM1	83	87.561	Equus_caballus
ENSOGAG00000032369	HFM1	74	67.105	ENSELUG00000018944	hfm1	97	67.105	Esox_lucius
ENSOGAG00000032369	HFM1	99	87.368	ENSFCAG00000029116	HFM1	85	87.368	Felis_catus
ENSOGAG00000032369	HFM1	99	64.234	ENSFALG00000001781	HFM1	85	64.834	Ficedula_albicollis
ENSOGAG00000032369	HFM1	100	83.077	ENSFDAG00000020816	HFM1	83	83.077	Fukomys_damarensis
ENSOGAG00000032369	HFM1	78	60.938	ENSGMOG00000017436	hfm1	100	60.938	Gadus_morhua
ENSOGAG00000032369	HFM1	76	65.166	ENSGAFG00000018093	hfm1	92	67.233	Gambusia_affinis
ENSOGAG00000032369	HFM1	78	62.319	ENSGACG00000015686	hfm1	100	62.319	Gasterosteus_aculeatus
ENSOGAG00000032369	HFM1	100	88.844	ENSGGOG00000038524	HFM1	85	88.844	Gorilla_gorilla
ENSOGAG00000032369	HFM1	76	64.775	ENSHBUG00000007309	hfm1	86	64.775	Haplochromis_burtoni
ENSOGAG00000032369	HFM1	66	64.015	ENSHCOG00000019632	hfm1	97	64.015	Hippocampus_comes
ENSOGAG00000032369	HFM1	77	64.831	ENSIPUG00000017020	hfm1	92	65.636	Ictalurus_punctatus
ENSOGAG00000032369	HFM1	100	81.937	ENSJJAG00000017198	Hfm1	88	81.937	Jaculus_jaculus
ENSOGAG00000032369	HFM1	73	62.721	ENSKMAG00000002282	hfm1	90	62.721	Kryptolebias_marmoratus
ENSOGAG00000032369	HFM1	76	62.674	ENSLBEG00000006759	hfm1	96	65.000	Labrus_bergylta
ENSOGAG00000032369	HFM1	78	70.072	ENSLACG00000010698	HFM1	91	70.175	Latimeria_chalumnae
ENSOGAG00000032369	HFM1	83	64.689	ENSLOCG00000004931	hfm1	95	64.917	Lepisosteus_oculatus
ENSOGAG00000032369	HFM1	60	88.560	ENSLAFG00000015903	-	99	88.560	Loxodonta_africana
ENSOGAG00000032369	HFM1	100	85.077	ENSMFAG00000003649	HFM1	85	85.077	Macaca_fascicularis
ENSOGAG00000032369	HFM1	100	88.111	ENSMMUG00000006819	HFM1	85	88.111	Macaca_mulatta
ENSOGAG00000032369	HFM1	67	65.742	ENSMAMG00000004623	hfm1	98	70.352	Mastacembelus_armatus
ENSOGAG00000032369	HFM1	76	63.597	ENSMZEG00005004679	hfm1	97	64.994	Maylandia_zebra
ENSOGAG00000032369	HFM1	63	77.490	ENSMGAG00000008437	HFM1	96	77.490	Meleagris_gallopavo
ENSOGAG00000032369	HFM1	99	80.230	ENSMAUG00000018858	Hfm1	85	80.179	Mesocricetus_auratus
ENSOGAG00000032369	HFM1	100	89.585	ENSMICG00000037935	HFM1	85	89.585	Microcebus_murinus
ENSOGAG00000032369	HFM1	99	78.343	ENSMOCG00000014812	Hfm1	85	78.303	Microtus_ochrogaster
ENSOGAG00000032369	HFM1	73	63.789	ENSMMOG00000006148	hfm1	96	64.311	Mola_mola
ENSOGAG00000032369	HFM1	76	63.636	ENSMALG00000002401	hfm1	96	64.959	Monopterus_albus
ENSOGAG00000032369	HFM1	95	77.593	MGP_CAROLIEiJ_G0027496	Hfm1	97	69.330	Mus_caroli
ENSOGAG00000032369	HFM1	100	78.519	ENSMUSG00000043410	Hfm1	100	71.186	Mus_musculus
ENSOGAG00000032369	HFM1	100	78.600	MGP_PahariEiJ_G0017268	Hfm1	100	71.913	Mus_pahari
ENSOGAG00000032369	HFM1	100	78.356	MGP_SPRETEiJ_G0028495	Hfm1	100	70.944	Mus_spretus
ENSOGAG00000032369	HFM1	99	85.586	ENSMPUG00000004594	HFM1	83	85.586	Mustela_putorius_furo
ENSOGAG00000032369	HFM1	99	86.319	ENSMLUG00000010200	HFM1	85	86.319	Myotis_lucifugus
ENSOGAG00000032369	HFM1	76	60.493	ENSNBRG00000002910	hfm1	97	65.133	Neolamprologus_brichardi
ENSOGAG00000032369	HFM1	100	84.390	ENSNLEG00000010285	HFM1	85	84.390	Nomascus_leucogenys
ENSOGAG00000032369	HFM1	94	73.038	ENSMEUG00000015788	HFM1	80	73.038	Notamacropus_eugenii
ENSOGAG00000032369	HFM1	79	77.399	ENSOPRG00000013916	HFM1	68	77.399	Ochotona_princeps
ENSOGAG00000032369	HFM1	80	63.728	ENSONIG00000010590	hfm1	94	63.728	Oreochromis_niloticus
ENSOGAG00000032369	HFM1	66	65.233	ENSORLG00000026844	hfm1	99	65.233	Oryzias_latipes
ENSOGAG00000032369	HFM1	78	56.224	ENSORLG00020002951	hfm1	78	55.802	Oryzias_latipes_hni
ENSOGAG00000032369	HFM1	99	53.312	ENSOMEG00000016474	hfm1	83	53.312	Oryzias_melastigma
ENSOGAG00000032369	HFM1	100	85.447	ENSOARG00000015812	HFM1	86	85.447	Ovis_aries
ENSOGAG00000032369	HFM1	100	88.925	ENSPPAG00000024582	HFM1	93	88.925	Pan_paniscus
ENSOGAG00000032369	HFM1	99	87.368	ENSPPRG00000003270	HFM1	85	87.368	Panthera_pardus
ENSOGAG00000032369	HFM1	99	87.205	ENSPTIG00000018881	HFM1	85	87.205	Panthera_tigris_altaica
ENSOGAG00000032369	HFM1	100	88.681	ENSPTRG00000000948	HFM1	85	88.681	Pan_troglodytes
ENSOGAG00000032369	HFM1	100	88.274	ENSPANG00000009838	HFM1	85	88.274	Papio_anubis
ENSOGAG00000032369	HFM1	74	67.293	ENSPKIG00000003810	hfm1	96	67.711	Paramormyrops_kingsleyae
ENSOGAG00000032369	HFM1	67	65.459	ENSPMGG00000011059	hfm1	100	65.459	Periophthalmus_magnuspinnatus
ENSOGAG00000032369	HFM1	100	80.472	ENSPEMG00000022852	Hfm1	85	80.472	Peromyscus_maniculatus_bairdii
ENSOGAG00000032369	HFM1	99	73.052	ENSPCIG00000014233	HFM1	83	73.052	Phascolarctos_cinereus
ENSOGAG00000032369	HFM1	78	65.768	ENSPFOG00000017194	hfm1	92	65.768	Poecilia_formosa
ENSOGAG00000032369	HFM1	76	66.915	ENSPLAG00000000571	hfm1	85	66.915	Poecilia_latipinna
ENSOGAG00000032369	HFM1	76	66.880	ENSPMEG00000019475	hfm1	86	66.880	Poecilia_mexicana
ENSOGAG00000032369	HFM1	78	65.272	ENSPREG00000007803	hfm1	92	66.829	Poecilia_reticulata
ENSOGAG00000032369	HFM1	100	88.599	ENSPPYG00000001163	HFM1	85	88.599	Pongo_abelii
ENSOGAG00000032369	HFM1	67	77.966	ENSPCAG00000004289	-	57	77.966	Procavia_capensis
ENSOGAG00000032369	HFM1	100	78.310	ENSPVAG00000009713	HFM1	87	78.310	Pteropus_vampyrus
ENSOGAG00000032369	HFM1	76	63.490	ENSPNYG00000001795	hfm1	97	64.994	Pundamilia_nyererei
ENSOGAG00000032369	HFM1	69	67.414	ENSPNAG00000010865	hfm1	84	67.414	Pygocentrus_nattereri
ENSOGAG00000032369	HFM1	100	78.112	ENSRNOG00000023299	Hfm1	85	78.112	Rattus_norvegicus
ENSOGAG00000032369	HFM1	100	88.111	ENSRROG00000045569	HFM1	85	88.111	Rhinopithecus_roxellana
ENSOGAG00000032369	HFM1	100	86.726	ENSSBOG00000027456	HFM1	87	86.726	Saimiri_boliviensis_boliviensis
ENSOGAG00000032369	HFM1	70	69.827	ENSSHAG00000014616	-	98	69.827	Sarcophilus_harrisii
ENSOGAG00000032369	HFM1	99	56.714	ENSSFOG00015020129	hfm1	82	56.714	Scleropages_formosus
ENSOGAG00000032369	HFM1	73	64.889	ENSSMAG00000006907	hfm1	87	64.889	Scophthalmus_maximus
ENSOGAG00000032369	HFM1	67	65.700	ENSSDUG00000011424	hfm1	93	65.700	Seriola_dumerili
ENSOGAG00000032369	HFM1	68	65.824	ENSSLDG00000016386	hfm1	92	65.824	Seriola_lalandi_dorsalis
ENSOGAG00000032369	HFM1	76	60.490	ENSSPAG00000001023	hfm1	94	66.347	Stegastes_partitus
ENSOGAG00000032369	HFM1	99	85.819	ENSSSCG00000006912	HFM1	90	85.819	Sus_scrofa
ENSOGAG00000032369	HFM1	78	74.843	ENSTGUG00000006172	HFM1	100	74.843	Taeniopygia_guttata
ENSOGAG00000032369	HFM1	100	85.528	ENSTTRG00000013933	HFM1	87	85.528	Tursiops_truncatus
ENSOGAG00000032369	HFM1	92	85.244	ENSVPAG00000011331	HFM1	78	85.244	Vicugna_pacos
ENSOGAG00000032369	HFM1	77	86.653	ENSVVUG00000020760	HFM1	91	86.653	Vulpes_vulpes
ENSOGAG00000032369	HFM1	68	66.587	ENSXMAG00000004178	hfm1	93	66.587	Xiphophorus_maculatus