EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOGAG00000033608 (Gene tree)
Gene ID: 100967092
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit A
Gene Type: protein_coding
Species: Otolemur_garnettii
Status: putative
Strand: Minus strand
Length: 33429 bases
Position: chrGL873565.1:11846228-11879656
Accession: 100967092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOGAP00000020302	RNA_pol_Rpb1_5	PF04998.17	5.2e-101	1	1
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	1	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	2	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	3	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	4	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	5	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	6	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	7	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	8	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	9	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	10	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	11	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	12	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	13	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	14	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	15	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	16	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	17	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	18	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	19	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	20	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	21	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	22	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	23	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	24	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	25	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	26	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	27	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	28	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	29	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	30	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	31	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	32	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	33	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	34	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	35	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	36	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	37	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	38	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	39	40
ENSOGAP00000020302	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	40	40
ENSOGAP00000020302	RNA_pol_Rpb1_4	PF05000.17	2.9e-38	1	1
ENSOGAP00000020302	RNA_pol_Rpb1_2	PF00623.20	8.8e-75	1	1
ENSOGAP00000020302	RNA_pol_Rpb1_3	PF04983.18	7e-50	1	1
ENSOGAP00000020302	RNA_pol_Rpb1_1	PF04997.12	4.5e-109	1	1
ENSOGAP00000020302	RNA_pol_Rpb1_7	PF04990.12	1.7e-54	1	1
ENSOGAP00000020302	RNA_pol_Rpb1_6	PF04992.14	6.4e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOGAT00000033775	-	6082	XM_003791147	ENSOGAP00000020302	1970 (aa)	XP_003791195	H0XW09

Gene Model

Click here to download ENSOGAG00000033608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOGAG00000033608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOGAG00000033608	-	66	38.411	ENSOGAG00000010995	POLR3A	91	38.268
ENSOGAG00000033608	-	59	33.636	ENSOGAG00000004031	POLR1A	69	33.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOGAG00000033608	-	82	94.482	ENSAPOG00000006552	polr2a	91	94.475	Acanthochromis_polyacanthus
ENSOGAG00000033608	-	100	99.544	ENSAMEG00000016265	-	100	99.544	Ailuropoda_melanoleuca
ENSOGAG00000033608	-	82	92.498	ENSACIG00000015982	polr2a	81	92.489	Amphilophus_citrinellus
ENSOGAG00000033608	-	97	92.436	ENSAOCG00000004255	polr2a	96	92.427	Amphiprion_ocellaris
ENSOGAG00000033608	-	82	94.544	ENSAPEG00000012623	polr2a	82	94.538	Amphiprion_percula
ENSOGAG00000033608	-	82	94.420	ENSATEG00000019644	polr2a	82	94.413	Anabas_testudineus
ENSOGAG00000033608	-	100	98.426	ENSACAG00000014561	POLR2A	100	98.426	Anolis_carolinensis
ENSOGAG00000033608	-	100	99.848	ENSANAG00000020093	-	100	99.848	Aotus_nancymaae
ENSOGAG00000033608	-	82	94.234	ENSACLG00000006735	polr2a	82	94.227	Astatotilapia_calliptera
ENSOGAG00000033608	-	82	94.792	ENSAMXG00000020046	polr2a	82	94.786	Astyanax_mexicanus
ENSOGAG00000033608	-	100	99.797	ENSBTAG00000046765	POLR2A	100	99.797	Bos_taurus
ENSOGAG00000033608	-	94	70.123	WBGene00000123	ama-1	99	72.727	Caenorhabditis_elegans
ENSOGAG00000033608	-	100	99.391	ENSCAFG00000016532	POLR2A	100	99.553	Canis_familiaris
ENSOGAG00000033608	-	100	98.884	ENSCAFG00020007929	-	100	98.884	Canis_lupus_dingo
ENSOGAG00000033608	-	100	99.797	ENSCHIG00000027173	-	100	99.797	Capra_hircus
ENSOGAG00000033608	-	100	97.360	ENSTSYG00000012803	-	100	97.868	Carlito_syrichta
ENSOGAG00000033608	-	98	95.442	ENSCAPG00000001882	-	98	98.353	Cavia_aperea
ENSOGAG00000033608	-	100	95.519	ENSCPOG00000014812	-	98	98.385	Cavia_porcellus
ENSOGAG00000033608	-	100	99.848	ENSCCAG00000020938	-	100	99.848	Cebus_capucinus
ENSOGAG00000033608	-	100	99.797	ENSCATG00000013680	-	100	99.797	Cercocebus_atys
ENSOGAG00000033608	-	100	99.695	ENSCLAG00000012196	-	100	99.695	Chinchilla_lanigera
ENSOGAG00000033608	-	82	90.561	ENSCSAG00000011644	-	82	90.561	Chlorocebus_sabaeus
ENSOGAG00000033608	-	100	93.959	ENSCPBG00000012697	POLR2A	100	93.959	Chrysemys_picta_bellii
ENSOGAG00000033608	-	99	76.488	ENSCING00000007884	-	99	76.751	Ciona_intestinalis
ENSOGAG00000033608	-	95	83.333	ENSCSAVG00000008334	-	99	83.871	Ciona_savignyi
ENSOGAG00000033608	-	100	99.137	ENSCANG00000010622	-	100	99.137	Colobus_angolensis_palliatus
ENSOGAG00000033608	-	100	94.209	ENSCGRG00001003538	Polr2a	100	94.512	Cricetulus_griseus_chok1gshd
ENSOGAG00000033608	-	96	95.335	ENSCGRG00000012105	Polr2a	95	95.890	Cricetulus_griseus_crigri
ENSOGAG00000033608	-	82	93.800	ENSCSEG00000002635	polr2a	82	93.793	Cynoglossus_semilaevis
ENSOGAG00000033608	-	82	94.668	ENSCVAG00000005156	polr2a	82	94.662	Cyprinodon_variegatus
ENSOGAG00000033608	-	82	94.486	ENSDARG00000099966	polr2a	82	94.479	Danio_rerio
ENSOGAG00000033608	-	100	96.853	ENSDNOG00000016482	-	100	96.853	Dasypus_novemcinctus
ENSOGAG00000033608	-	100	99.848	ENSDORG00000008667	Polr2a	100	99.848	Dipodomys_ordii
ENSOGAG00000033608	-	99	69.868	FBgn0003277	RpII215	99	74.735	Drosophila_melanogaster
ENSOGAG00000033608	-	94	87.958	ENSETEG00000002540	-	94	84.580	Echinops_telfairi
ENSOGAG00000033608	-	81	88.147	ENSEBUG00000013967	polr2a	82	87.554	Eptatretus_burgeri
ENSOGAG00000033608	-	100	96.802	ENSEASG00005019114	-	100	96.904	Equus_asinus_asinus
ENSOGAG00000033608	-	100	99.797	ENSECAG00000018485	POLR2A	100	99.797	Equus_caballus
ENSOGAG00000033608	-	87	99.599	ENSEEUG00000001154	-	95	99.599	Erinaceus_europaeus
ENSOGAG00000033608	-	89	90.018	ENSELUG00000014284	polr2a	84	90.685	Esox_lucius
ENSOGAG00000033608	-	100	99.797	ENSFDAG00000008287	-	100	99.797	Fukomys_damarensis
ENSOGAG00000033608	-	85	94.668	ENSFHEG00000001768	polr2a	98	94.662	Fundulus_heteroclitus
ENSOGAG00000033608	-	99	90.361	ENSGMOG00000007725	polr2a	100	100.000	Gadus_morhua
ENSOGAG00000033608	-	99	94.366	ENSGAFG00000005389	polr2a	99	92.427	Gambusia_affinis
ENSOGAG00000033608	-	99	90.750	ENSGACG00000019366	polr2a	100	88.249	Gasterosteus_aculeatus
ENSOGAG00000033608	-	100	98.024	ENSGGOG00000014800	-	100	98.024	Gorilla_gorilla
ENSOGAG00000033608	-	85	94.234	ENSHBUG00000018937	polr2a	99	94.227	Haplochromis_burtoni
ENSOGAG00000033608	-	100	99.797	ENSHGLG00000012381	POLR2A	100	99.797	Heterocephalus_glaber_female
ENSOGAG00000033608	-	100	99.797	ENSHGLG00100014843	POLR2A	100	99.797	Heterocephalus_glaber_male
ENSOGAG00000033608	-	82	93.924	ENSHCOG00000011874	polr2a	82	93.917	Hippocampus_comes
ENSOGAG00000033608	-	82	94.172	ENSIPUG00000002613	Polr2a	82	94.165	Ictalurus_punctatus
ENSOGAG00000033608	-	100	99.848	ENSSTOG00000001304	-	100	99.848	Ictidomys_tridecemlineatus
ENSOGAG00000033608	-	100	99.746	ENSJJAG00000013049	Polr2a	100	99.746	Jaculus_jaculus
ENSOGAG00000033608	-	80	85.229	ENSKMAG00000016343	polr2a	86	89.286	Kryptolebias_marmoratus
ENSOGAG00000033608	-	82	94.172	ENSLBEG00000027652	polr2a	82	94.165	Labrus_bergylta
ENSOGAG00000033608	-	80	87.097	ENSLACG00000012071	POLR2A	81	87.152	Latimeria_chalumnae
ENSOGAG00000033608	-	91	94.840	ENSLOCG00000013863	polr2a	99	94.534	Lepisosteus_oculatus
ENSOGAG00000033608	-	100	99.797	ENSLAFG00000008626	-	100	99.797	Loxodonta_africana
ENSOGAG00000033608	-	50	98.161	ENSMFAG00000007042	-	99	98.161	Macaca_fascicularis
ENSOGAG00000033608	-	100	99.797	ENSMMUG00000023620	-	100	99.797	Macaca_mulatta
ENSOGAG00000033608	-	100	99.090	ENSMNEG00000040407	-	100	99.090	Macaca_nemestrina
ENSOGAG00000033608	-	99	94.870	ENSMLEG00000030263	-	99	98.161	Mandrillus_leucophaeus
ENSOGAG00000033608	-	82	94.296	ENSMAMG00000003351	polr2a	82	94.289	Mastacembelus_armatus
ENSOGAG00000033608	-	82	94.234	ENSMZEG00005021429	polr2a	82	94.227	Maylandia_zebra
ENSOGAG00000033608	-	50	99.796	ENSMAUG00000021055	-	99	99.796	Mesocricetus_auratus
ENSOGAG00000033608	-	100	99.848	ENSMICG00000013372	-	100	99.848	Microcebus_murinus
ENSOGAG00000033608	-	100	93.073	ENSMOCG00000018279	Polr2a	100	93.277	Microtus_ochrogaster
ENSOGAG00000033608	-	87	93.862	ENSMMOG00000012515	polr2a	95	93.855	Mola_mola
ENSOGAG00000033608	-	100	99.391	ENSMODG00000007009	-	100	99.391	Monodelphis_domestica
ENSOGAG00000033608	-	94	91.708	ENSMALG00000008716	polr2a	99	92.365	Monopterus_albus
ENSOGAG00000033608	-	100	99.797	MGP_CAROLIEiJ_G0016587	Polr2a	100	99.797	Mus_caroli
ENSOGAG00000033608	-	100	99.797	ENSMUSG00000005198	Polr2a	100	99.797	Mus_musculus
ENSOGAG00000033608	-	100	98.027	MGP_PahariEiJ_G0017718	Polr2a	100	98.027	Mus_pahari
ENSOGAG00000033608	-	100	99.797	MGP_SPRETEiJ_G0017423	Polr2a	100	99.797	Mus_spretus
ENSOGAG00000033608	-	100	99.746	ENSMPUG00000009648	-	100	99.746	Mustela_putorius_furo
ENSOGAG00000033608	-	100	99.341	ENSMLUG00000009088	-	100	99.341	Myotis_lucifugus
ENSOGAG00000033608	-	100	99.848	ENSNGAG00000002543	Polr2a	100	99.848	Nannospalax_galili
ENSOGAG00000033608	-	82	92.188	ENSNBRG00000002005	polr2a	81	92.179	Neolamprologus_brichardi
ENSOGAG00000033608	-	100	98.632	ENSNLEG00000009460	-	100	98.632	Nomascus_leucogenys
ENSOGAG00000033608	-	94	99.346	ENSMEUG00000008611	-	93	99.346	Notamacropus_eugenii
ENSOGAG00000033608	-	80	99.558	ENSOPRG00000015116	-	99	99.558	Ochotona_princeps
ENSOGAG00000033608	-	100	92.144	ENSODEG00000017674	-	100	95.025	Octodon_degus
ENSOGAG00000033608	-	82	94.420	ENSONIG00000009231	polr2a	82	94.413	Oreochromis_niloticus
ENSOGAG00000033608	-	100	97.260	ENSOCUG00000017929	-	100	97.596	Oryctolagus_cuniculus
ENSOGAG00000033608	-	82	94.296	ENSORLG00000006431	polr2a	82	94.289	Oryzias_latipes
ENSOGAG00000033608	-	82	94.296	ENSORLG00020010235	polr2a	82	94.289	Oryzias_latipes_hni
ENSOGAG00000033608	-	82	94.296	ENSORLG00015007075	polr2a	82	94.289	Oryzias_latipes_hsok
ENSOGAG00000033608	-	92	94.406	ENSOMEG00000010713	polr2a	100	94.406	Oryzias_melastigma
ENSOGAG00000033608	-	98	99.630	ENSOARG00000013874	-	100	99.630	Ovis_aries
ENSOGAG00000033608	-	93	97.064	ENSPPAG00000043734	-	100	97.259	Pan_paniscus
ENSOGAG00000033608	-	100	98.632	ENSPTRG00000008691	POLR2A	100	98.632	Pan_troglodytes
ENSOGAG00000033608	-	100	99.137	ENSPANG00000024099	-	100	99.137	Papio_anubis
ENSOGAG00000033608	-	77	92.712	ENSPKIG00000005727	polr2a	85	82.000	Paramormyrops_kingsleyae
ENSOGAG00000033608	-	98	96.478	ENSPSIG00000014006	POLR2A	100	96.478	Pelodiscus_sinensis
ENSOGAG00000033608	-	100	94.225	ENSPMGG00000019734	polr2a	99	94.662	Periophthalmus_magnuspinnatus
ENSOGAG00000033608	-	100	99.848	ENSPEMG00000012521	Polr2a	100	99.848	Peromyscus_maniculatus_bairdii
ENSOGAG00000033608	-	86	99.256	ENSPCIG00000028851	-	82	99.256	Phascolarctos_cinereus
ENSOGAG00000033608	-	85	94.606	ENSPFOG00000007890	polr2a	99	94.600	Poecilia_formosa
ENSOGAG00000033608	-	85	94.606	ENSPLAG00000007399	polr2a	99	94.600	Poecilia_latipinna
ENSOGAG00000033608	-	85	94.606	ENSPMEG00000002071	polr2a	99	94.600	Poecilia_mexicana
ENSOGAG00000033608	-	82	94.544	ENSPREG00000013122	polr2a	82	94.538	Poecilia_reticulata
ENSOGAG00000033608	-	100	96.653	ENSPPYG00000007924	-	100	98.783	Pongo_abelii
ENSOGAG00000033608	-	92	99.737	ENSPCAG00000006951	-	92	99.737	Procavia_capensis
ENSOGAG00000033608	-	100	98.741	ENSPCOG00000025260	-	100	98.741	Propithecus_coquereli
ENSOGAG00000033608	-	100	99.594	ENSPVAG00000005069	-	100	99.594	Pteropus_vampyrus
ENSOGAG00000033608	-	83	94.568	ENSPNYG00000022340	polr2a	82	94.289	Pundamilia_nyererei
ENSOGAG00000033608	-	82	94.606	ENSPNAG00000011237	polr2a	82	94.600	Pygocentrus_nattereri
ENSOGAG00000033608	-	100	99.746	ENSRNOG00000028834	Polr2a	100	99.746	Rattus_norvegicus
ENSOGAG00000033608	-	82	99.379	ENSRBIG00000002471	-	100	96.396	Rhinopithecus_bieti
ENSOGAG00000033608	-	100	99.442	ENSRROG00000029583	-	100	99.442	Rhinopithecus_roxellana
ENSOGAG00000033608	-	83	88.000	YDL140C	RPO21	99	80.180	Saccharomyces_cerevisiae
ENSOGAG00000033608	-	100	99.848	ENSSBOG00000000808	-	100	99.848	Saimiri_boliviensis_boliviensis
ENSOGAG00000033608	-	92	99.255	ENSSHAG00000002858	-	84	99.255	Sarcophilus_harrisii
ENSOGAG00000033608	-	82	94.544	ENSSFOG00015023275	polr2a	82	94.538	Scleropages_formosus
ENSOGAG00000033608	-	82	93.924	ENSSMAG00000009137	polr2a	82	93.917	Scophthalmus_maximus
ENSOGAG00000033608	-	82	94.420	ENSSDUG00000020466	polr2a	82	94.413	Seriola_dumerili
ENSOGAG00000033608	-	82	94.420	ENSSLDG00000020613	polr2a	82	94.413	Seriola_lalandi_dorsalis
ENSOGAG00000033608	-	97	94.856	ENSSARG00000005875	-	99	94.856	Sorex_araneus
ENSOGAG00000033608	-	100	94.482	ENSSPAG00000016741	polr2a	94	94.475	Stegastes_partitus
ENSOGAG00000033608	-	100	99.086	ENSSSCG00000028278	-	100	99.086	Sus_scrofa
ENSOGAG00000033608	-	99	88.600	ENSTRUG00000012320	polr2a	81	88.586	Takifugu_rubripes
ENSOGAG00000033608	-	99	92.932	ENSTNIG00000010136	polr2a	100	92.924	Tetraodon_nigroviridis
ENSOGAG00000033608	-	74	100.000	ENSTBEG00000013294	-	58	100.000	Tupaia_belangeri
ENSOGAG00000033608	-	100	98.274	ENSTTRG00000014273	-	100	98.274	Tursiops_truncatus
ENSOGAG00000033608	-	96	96.718	ENSUAMG00000014866	-	100	99.381	Ursus_americanus
ENSOGAG00000033608	-	99	97.204	ENSUMAG00000015732	-	100	97.204	Ursus_maritimus
ENSOGAG00000033608	-	62	100.000	ENSVPAG00000008842	-	76	100.000	Vicugna_pacos
ENSOGAG00000033608	-	100	96.452	ENSVVUG00000027878	-	100	98.376	Vulpes_vulpes
ENSOGAG00000033608	-	99	96.971	ENSXETG00000012465	polr2a	100	96.971	Xenopus_tropicalis
ENSOGAG00000033608	-	89	92.374	ENSXCOG00000001804	polr2a	94	92.365	Xiphophorus_couchianus
ENSOGAG00000033608	-	82	94.544	ENSXMAG00000015687	polr2a	82	94.538	Xiphophorus_maculatus