EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000086 (Gene tree)
Gene ID: 112137381
Gene Symbol: smarca5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 10132 bases
Position: chrNVQA01000036.1:541973-552104
Accession: 112137381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002876	ResIII	PF04851.15	5.1e-11	1	1
ENSOMEP00000002876	DEAD	PF00270.29	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011773	-	6722	-	ENSOMEP00000002876	1036 (aa)	XP_024115455	UPI000CF7E18E

Gene Model

Click here to download ENSOMEG00000000086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000086	smarca5	50	45.848	ENSOMEG00000000135	hells	70	43.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000086	smarca5	95	82.727	ENSG00000102038	SMARCA1	92	83.640	Homo_sapiens
ENSOMEG00000000086	smarca5	100	97.300	ENSAPOG00000016035	smarca5	100	97.300	Acanthochromis_polyacanthus
ENSOMEG00000000086	smarca5	95	81.936	ENSAMEG00000015218	SMARCA1	92	82.727	Ailuropoda_melanoleuca
ENSOMEG00000000086	smarca5	87	97.447	ENSACIG00000016982	smarca5	100	97.447	Amphilophus_citrinellus
ENSOMEG00000000086	smarca5	100	97.300	ENSAOCG00000015578	smarca5	100	97.300	Amphiprion_ocellaris
ENSOMEG00000000086	smarca5	100	97.300	ENSAPEG00000011117	smarca5	100	97.300	Amphiprion_percula
ENSOMEG00000000086	smarca5	100	96.718	ENSATEG00000012894	smarca5	100	96.718	Anabas_testudineus
ENSOMEG00000000086	smarca5	94	84.623	ENSAPLG00000013149	SMARCA1	99	84.867	Anas_platyrhynchos
ENSOMEG00000000086	smarca5	98	82.681	ENSACAG00000011376	SMARCA1	93	85.481	Anolis_carolinensis
ENSOMEG00000000086	smarca5	95	78.081	ENSANAG00000023098	SMARCA1	92	78.937	Aotus_nancymaae
ENSOMEG00000000086	smarca5	100	96.625	ENSACLG00000025356	smarca5	100	96.625	Astatotilapia_calliptera
ENSOMEG00000000086	smarca5	100	90.970	ENSAMXG00000005709	smarca5	97	92.567	Astyanax_mexicanus
ENSOMEG00000000086	smarca5	90	84.855	ENSAMXG00000011227	smarca1	99	85.887	Astyanax_mexicanus
ENSOMEG00000000086	smarca5	95	83.078	ENSBTAG00000002292	SMARCA1	90	83.491	Bos_taurus
ENSOMEG00000000086	smarca5	96	62.463	WBGene00002169	isw-1	92	65.245	Caenorhabditis_elegans
ENSOMEG00000000086	smarca5	94	83.401	ENSCJAG00000002868	SMARCA1	92	83.640	Callithrix_jacchus
ENSOMEG00000000086	smarca5	95	73.386	ENSCAFG00000018673	SMARCA1	99	75.176	Canis_familiaris
ENSOMEG00000000086	smarca5	95	82.929	ENSCAFG00020001751	SMARCA1	92	83.742	Canis_lupus_dingo
ENSOMEG00000000086	smarca5	95	82.776	ENSCHIG00000009837	SMARCA1	92	83.333	Capra_hircus
ENSOMEG00000000086	smarca5	95	82.929	ENSTSYG00000004240	SMARCA1	94	84.517	Carlito_syrichta
ENSOMEG00000000086	smarca5	95	81.526	ENSCPOG00000013601	SMARCA1	93	82.317	Cavia_porcellus
ENSOMEG00000000086	smarca5	95	80.101	ENSCCAG00000030817	SMARCA1	92	80.982	Cebus_capucinus
ENSOMEG00000000086	smarca5	93	83.747	ENSCATG00000015921	SMARCA1	90	84.771	Cercocebus_atys
ENSOMEG00000000086	smarca5	95	82.121	ENSCLAG00000002171	SMARCA1	92	82.924	Chinchilla_lanigera
ENSOMEG00000000086	smarca5	95	82.727	ENSCSAG00000008460	SMARCA1	92	83.640	Chlorocebus_sabaeus
ENSOMEG00000000086	smarca5	95	84.600	ENSCPBG00000001146	SMARCA1	92	85.174	Chrysemys_picta_bellii
ENSOMEG00000000086	smarca5	96	73.956	ENSCING00000004110	swi/snf	97	75.306	Ciona_intestinalis
ENSOMEG00000000086	smarca5	96	73.538	ENSCSAVG00000004620	-	99	76.174	Ciona_savignyi
ENSOMEG00000000086	smarca5	95	82.828	ENSCANG00000007183	SMARCA1	92	83.742	Colobus_angolensis_palliatus
ENSOMEG00000000086	smarca5	95	81.818	ENSCGRG00001010776	Smarca1	92	82.618	Cricetulus_griseus_chok1gshd
ENSOMEG00000000086	smarca5	95	81.256	ENSCGRG00000015301	Smarca1	94	83.051	Cricetulus_griseus_crigri
ENSOMEG00000000086	smarca5	100	96.525	ENSCSEG00000000328	smarca5	100	96.525	Cynoglossus_semilaevis
ENSOMEG00000000086	smarca5	100	95.946	ENSCVAG00000008668	smarca5	99	97.048	Cyprinodon_variegatus
ENSOMEG00000000086	smarca5	100	90.953	ENSDARG00000052348	smarca5	97	92.567	Danio_rerio
ENSOMEG00000000086	smarca5	94	83.651	ENSDARG00000012776	smarca1	96	83.651	Danio_rerio
ENSOMEG00000000086	smarca5	94	82.551	ENSDNOG00000004315	SMARCA1	91	84.452	Dasypus_novemcinctus
ENSOMEG00000000086	smarca5	96	81.663	ENSDORG00000009270	Smarca1	90	84.558	Dipodomys_ordii
ENSOMEG00000000086	smarca5	95	74.372	FBgn0011604	Iswi	97	74.000	Drosophila_melanogaster
ENSOMEG00000000086	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSOMEG00000000086	smarca5	97	81.132	ENSEBUG00000001239	smarca5	96	82.939	Eptatretus_burgeri
ENSOMEG00000000086	smarca5	94	79.385	ENSEASG00005008218	SMARCA1	99	79.776	Equus_asinus_asinus
ENSOMEG00000000086	smarca5	95	82.828	ENSECAG00000012106	SMARCA1	92	83.640	Equus_caballus
ENSOMEG00000000086	smarca5	76	83.775	ENSEEUG00000014927	SMARCA1	80	83.775	Erinaceus_europaeus
ENSOMEG00000000086	smarca5	94	84.939	ENSELUG00000010515	smarca1	95	85.882	Esox_lucius
ENSOMEG00000000086	smarca5	95	82.828	ENSFCAG00000018496	SMARCA1	92	83.640	Felis_catus
ENSOMEG00000000086	smarca5	88	85.886	ENSFALG00000000209	SMARCA1	98	85.886	Ficedula_albicollis
ENSOMEG00000000086	smarca5	95	81.162	ENSFDAG00000009818	SMARCA1	93	83.070	Fukomys_damarensis
ENSOMEG00000000086	smarca5	100	94.646	ENSFHEG00000007687	smarca5	100	94.551	Fundulus_heteroclitus
ENSOMEG00000000086	smarca5	97	81.980	ENSGALG00000008431	SMARCA1	95	85.789	Gallus_gallus
ENSOMEG00000000086	smarca5	100	96.815	ENSGAFG00000017731	smarca5	100	96.815	Gambusia_affinis
ENSOMEG00000000086	smarca5	94	85.185	ENSGAGG00000023575	SMARCA1	99	85.185	Gopherus_agassizii
ENSOMEG00000000086	smarca5	70	96.000	ENSGGOG00000012841	-	91	79.883	Gorilla_gorilla
ENSOMEG00000000086	smarca5	95	81.919	ENSHGLG00000003080	SMARCA1	92	82.720	Heterocephalus_glaber_female
ENSOMEG00000000086	smarca5	95	81.426	ENSHGLG00100001102	SMARCA1	98	82.215	Heterocephalus_glaber_male
ENSOMEG00000000086	smarca5	100	97.011	ENSHCOG00000005458	smarca5	100	97.011	Hippocampus_comes
ENSOMEG00000000086	smarca5	100	90.462	ENSIPUG00000005229	SMARCA5	99	92.814	Ictalurus_punctatus
ENSOMEG00000000086	smarca5	97	82.249	ENSIPUG00000016905	Smarca1	99	84.631	Ictalurus_punctatus
ENSOMEG00000000086	smarca5	97	81.773	ENSSTOG00000014524	SMARCA1	95	83.214	Ictidomys_tridecemlineatus
ENSOMEG00000000086	smarca5	97	80.556	ENSJJAG00000002593	Smarca1	93	82.197	Jaculus_jaculus
ENSOMEG00000000086	smarca5	100	97.008	ENSKMAG00000003777	smarca5	100	97.008	Kryptolebias_marmoratus
ENSOMEG00000000086	smarca5	94	95.706	ENSLBEG00000013295	SMARCA1	100	97.342	Labrus_bergylta
ENSOMEG00000000086	smarca5	100	95.656	ENSLBEG00000018112	smarca5	100	95.656	Labrus_bergylta
ENSOMEG00000000086	smarca5	94	85.876	ENSLACG00000016697	SMARCA1	95	85.876	Latimeria_chalumnae
ENSOMEG00000000086	smarca5	94	86.327	ENSLOCG00000014591	smarca1	95	86.489	Lepisosteus_oculatus
ENSOMEG00000000086	smarca5	96	81.275	ENSLAFG00000000896	SMARCA1	98	82.520	Loxodonta_africana
ENSOMEG00000000086	smarca5	95	82.727	ENSMFAG00000002117	SMARCA1	93	84.591	Macaca_fascicularis
ENSOMEG00000000086	smarca5	93	83.747	ENSMMUG00000008818	SMARCA1	97	84.558	Macaca_mulatta
ENSOMEG00000000086	smarca5	93	83.747	ENSMNEG00000041768	SMARCA1	93	84.591	Macaca_nemestrina
ENSOMEG00000000086	smarca5	95	82.727	ENSMLEG00000043198	SMARCA1	92	83.640	Mandrillus_leucophaeus
ENSOMEG00000000086	smarca5	100	96.731	ENSMAMG00000014294	smarca5	100	96.731	Mastacembelus_armatus
ENSOMEG00000000086	smarca5	100	96.625	ENSMZEG00005009369	smarca5	100	96.625	Maylandia_zebra
ENSOMEG00000000086	smarca5	94	83.602	ENSMGAG00000007042	SMARCA1	97	83.838	Meleagris_gallopavo
ENSOMEG00000000086	smarca5	93	82.080	ENSMAUG00000008133	Smarca1	90	82.945	Mesocricetus_auratus
ENSOMEG00000000086	smarca5	97	82.090	ENSMICG00000015768	SMARCA1	92	83.947	Microcebus_murinus
ENSOMEG00000000086	smarca5	95	81.106	ENSMOCG00000009464	Smarca1	92	81.892	Microtus_ochrogaster
ENSOMEG00000000086	smarca5	96	95.871	ENSMMOG00000005547	smarca5	100	95.871	Mola_mola
ENSOMEG00000000086	smarca5	99	80.695	ENSMODG00000013187	-	94	84.718	Monodelphis_domestica
ENSOMEG00000000086	smarca5	100	96.532	ENSMALG00000002081	smarca5	100	96.532	Monopterus_albus
ENSOMEG00000000086	smarca5	97	80.138	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.197	Mus_caroli
ENSOMEG00000000086	smarca5	97	80.396	ENSMUSG00000031099	Smarca1	92	82.197	Mus_musculus
ENSOMEG00000000086	smarca5	96	80.558	MGP_PahariEiJ_G0031579	Smarca1	92	82.480	Mus_pahari
ENSOMEG00000000086	smarca5	97	80.396	MGP_SPRETEiJ_G0034192	Smarca1	92	82.197	Mus_spretus
ENSOMEG00000000086	smarca5	95	81.936	ENSMPUG00000017423	SMARCA1	87	82.727	Mustela_putorius_furo
ENSOMEG00000000086	smarca5	95	80.677	ENSMLUG00000029614	SMARCA1	93	81.149	Myotis_lucifugus
ENSOMEG00000000086	smarca5	93	82.595	ENSNGAG00000006492	Smarca1	90	83.475	Nannospalax_galili
ENSOMEG00000000086	smarca5	96	97.485	ENSNBRG00000004463	smarca5	99	97.485	Neolamprologus_brichardi
ENSOMEG00000000086	smarca5	95	81.038	ENSNLEG00000015179	SMARCA1	94	83.864	Nomascus_leucogenys
ENSOMEG00000000086	smarca5	88	76.642	ENSMEUG00000008819	SMARCA1	97	76.642	Notamacropus_eugenii
ENSOMEG00000000086	smarca5	97	79.568	ENSODEG00000012163	SMARCA1	90	82.965	Octodon_degus
ENSOMEG00000000086	smarca5	100	96.721	ENSONIG00000009993	smarca5	100	96.721	Oreochromis_niloticus
ENSOMEG00000000086	smarca5	94	85.288	ENSOANG00000002862	SMARCA1	99	85.288	Ornithorhynchus_anatinus
ENSOMEG00000000086	smarca5	95	83.181	ENSOCUG00000001047	SMARCA1	92	83.742	Oryctolagus_cuniculus
ENSOMEG00000000086	smarca5	100	98.845	ENSORLG00000021998	smarca5	100	98.845	Oryzias_latipes
ENSOMEG00000000086	smarca5	100	98.748	ENSORLG00020017679	smarca5	100	98.748	Oryzias_latipes_hni
ENSOMEG00000000086	smarca5	100	99.229	ENSORLG00015017210	smarca5	100	99.229	Oryzias_latipes_hsok
ENSOMEG00000000086	smarca5	93	83.470	ENSOGAG00000004399	SMARCA1	90	84.122	Otolemur_garnettii
ENSOMEG00000000086	smarca5	94	83.333	ENSOARG00000014638	SMARCA1	99	83.333	Ovis_aries
ENSOMEG00000000086	smarca5	95	82.727	ENSPPAG00000034647	SMARCA1	92	83.640	Pan_paniscus
ENSOMEG00000000086	smarca5	95	82.929	ENSPPRG00000008929	SMARCA1	92	83.742	Panthera_pardus
ENSOMEG00000000086	smarca5	95	81.132	ENSPTIG00000000915	SMARCA1	96	81.910	Panthera_tigris_altaica
ENSOMEG00000000086	smarca5	95	82.727	ENSPTRG00000049876	SMARCA1	90	84.771	Pan_troglodytes
ENSOMEG00000000086	smarca5	95	82.727	ENSPANG00000003871	SMARCA1	92	83.640	Papio_anubis
ENSOMEG00000000086	smarca5	94	82.604	ENSPKIG00000013411	smarca1	96	84.648	Paramormyrops_kingsleyae
ENSOMEG00000000086	smarca5	94	85.185	ENSPSIG00000010101	SMARCA1	99	85.185	Pelodiscus_sinensis
ENSOMEG00000000086	smarca5	93	82.389	ENSPEMG00000017503	Smarca1	90	83.263	Peromyscus_maniculatus_bairdii
ENSOMEG00000000086	smarca5	94	85.143	ENSPCIG00000015460	SMARCA1	96	85.143	Phascolarctos_cinereus
ENSOMEG00000000086	smarca5	100	96.911	ENSPFOG00000007649	smarca5	100	96.911	Poecilia_formosa
ENSOMEG00000000086	smarca5	100	96.911	ENSPLAG00000003363	smarca5	100	96.911	Poecilia_latipinna
ENSOMEG00000000086	smarca5	100	97.008	ENSPMEG00000019849	smarca5	100	97.008	Poecilia_mexicana
ENSOMEG00000000086	smarca5	100	96.911	ENSPREG00000023250	smarca5	100	96.911	Poecilia_reticulata
ENSOMEG00000000086	smarca5	95	79.899	ENSPPYG00000020703	SMARCA1	92	80.777	Pongo_abelii
ENSOMEG00000000086	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	80.119	Propithecus_coquereli
ENSOMEG00000000086	smarca5	87	83.355	ENSPVAG00000003805	SMARCA1	84	83.443	Pteropus_vampyrus
ENSOMEG00000000086	smarca5	58	98.417	ENSPNYG00000012299	smarca5	92	98.417	Pundamilia_nyererei
ENSOMEG00000000086	smarca5	97	80.697	ENSRNOG00000003762	Smarca1	92	82.515	Rattus_norvegicus
ENSOMEG00000000086	smarca5	95	82.828	ENSRROG00000034167	SMARCA1	92	83.742	Rhinopithecus_roxellana
ENSOMEG00000000086	smarca5	94	83.538	ENSSBOG00000020641	SMARCA1	99	83.538	Saimiri_boliviensis_boliviensis
ENSOMEG00000000086	smarca5	94	80.350	ENSSHAG00000013518	SMARCA1	99	80.350	Sarcophilus_harrisii
ENSOMEG00000000086	smarca5	97	83.218	ENSSFOG00015009043	smarca1	96	85.656	Scleropages_formosus
ENSOMEG00000000086	smarca5	95	92.959	ENSSFOG00015016794	smarca5	100	93.196	Scleropages_formosus
ENSOMEG00000000086	smarca5	100	96.046	ENSSMAG00000004801	smarca5	100	95.757	Scophthalmus_maximus
ENSOMEG00000000086	smarca5	100	96.911	ENSSDUG00000020690	smarca5	100	96.911	Seriola_dumerili
ENSOMEG00000000086	smarca5	100	96.911	ENSSLDG00000025190	smarca5	100	96.911	Seriola_lalandi_dorsalis
ENSOMEG00000000086	smarca5	78	83.986	ENSSARG00000000842	SMARCA1	81	83.986	Sorex_araneus
ENSOMEG00000000086	smarca5	95	83.874	ENSSPUG00000000590	SMARCA1	93	85.789	Sphenodon_punctatus
ENSOMEG00000000086	smarca5	100	97.107	ENSSPAG00000002894	smarca5	100	97.107	Stegastes_partitus
ENSOMEG00000000086	smarca5	94	83.077	ENSSSCG00000012649	SMARCA1	95	83.214	Sus_scrofa
ENSOMEG00000000086	smarca5	94	84.420	ENSTGUG00000003899	-	99	84.663	Taeniopygia_guttata
ENSOMEG00000000086	smarca5	100	95.270	ENSTRUG00000014094	smarca5	100	95.463	Takifugu_rubripes
ENSOMEG00000000086	smarca5	98	94.877	ENSTNIG00000017717	smarca5	97	95.149	Tetraodon_nigroviridis
ENSOMEG00000000086	smarca5	86	82.373	ENSTBEG00000014973	SMARCA1	89	82.413	Tupaia_belangeri
ENSOMEG00000000086	smarca5	93	79.469	ENSTTRG00000006168	SMARCA1	96	80.231	Tursiops_truncatus
ENSOMEG00000000086	smarca5	95	82.727	ENSUAMG00000020201	SMARCA1	92	83.538	Ursus_americanus
ENSOMEG00000000086	smarca5	98	77.438	ENSUMAG00000004073	SMARCA1	95	85.185	Ursus_maritimus
ENSOMEG00000000086	smarca5	73	87.171	ENSVPAG00000010492	-	77	87.543	Vicugna_pacos
ENSOMEG00000000086	smarca5	95	82.929	ENSVVUG00000008878	SMARCA1	98	84.878	Vulpes_vulpes
ENSOMEG00000000086	smarca5	95	84.334	ENSXETG00000001526	smarca1	98	84.908	Xenopus_tropicalis
ENSOMEG00000000086	smarca5	97	97.123	ENSXCOG00000011170	smarca5	100	97.123	Xiphophorus_couchianus
ENSOMEG00000000086	smarca5	100	96.718	ENSXMAG00000009678	smarca5	100	96.718	Xiphophorus_maculatus