EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000000146 (Gene tree)
Gene ID
112142593
Gene Symbol
msi2a
Alias
-
Full Name
musashi RNA binding protein 2
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
308915 bases
Position
chrNVQA01000005.1:7428411-7737325
Accession
112142593
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000025128RRM_1PF00076.222.2e-3312
ENSOMEP00000025128RRM_1PF00076.222.2e-3322
ENSOMEP00000025152RRM_1PF00076.224.2e-3312
ENSOMEP00000025152RRM_1PF00076.224.2e-3322
ENSOMEP00000005260RRM_1PF00076.229.7e-3012
ENSOMEP00000005260RRM_1PF00076.229.7e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000007905-1199-ENSOMEP00000025128307 (aa)XP_024121830UPI000CE1BD41
ENSOMET00000007785-1561-ENSOMEP00000005260306 (aa)--
ENSOMET00000007847-1442-ENSOMEP00000025152388 (aa)XP_024121824UPI000CE230B7
Gene Model
Click here to download ENSOMEG00000000146's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000146's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000000146msi2a6147.208ENSOMEG00000005936hnrnpaba6445.833
ENSOMEG00000000146msi2a6146.524ENSOMEG00000018558hnrnpd8247.368
ENSOMEG00000000146msi2a8836.364ENSOMEG00000012368-8736.364
ENSOMEG00000000146msi2a5231.250ENSOMEG00000020931tia16431.250
ENSOMEG00000000146msi2a5635.795ENSOMEG00000006327-9030.970
ENSOMEG00000000146msi2a9435.000ENSOMEG00000023475-8336.364
ENSOMEG00000000146msi2a5835.870ENSOMEG00000021030-7236.667
ENSOMEG00000000146msi2a9869.659ENSOMEG00000002272-10070.288
ENSOMEG00000000146msi2a5941.304ENSOMEG00000002000-7536.364
ENSOMEG00000000146msi2a6036.585ENSOMEG00000013637-5036.923
ENSOMEG00000000146msi2a6039.216ENSOMEG00000002084-7039.216
ENSOMEG00000000146msi2a5938.158ENSOMEG00000011670-10038.158
ENSOMEG00000000146msi2a5936.735ENSOMEG00000009566-8436.735
ENSOMEG00000000146msi2a9870.846ENSOMEG00000017536MSI110070.846
ENSOMEG00000000146msi2a5741.279ENSOMEG00000015959-6139.691
ENSOMEG00000000146msi2a5940.217ENSOMEG00000004838hnrnpa39535.632
ENSOMEG00000000146msi2a8731.541ENSOMEG00000002509-9032.278
ENSOMEG00000000146msi2a6246.667ENSOMEG00000023772hnrnpabb8340.226
ENSOMEG00000000146msi2a5937.500ENSOMEG00000006903-8335.593
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000000146msi2a9891.694ENSG00000153944MSI210086.585Homo_sapiens
ENSOMEG00000000146msi2a100100.000ENSAPOG00000001658msi2a100100.000Acanthochromis_polyacanthus
ENSOMEG00000000146msi2a9886.520ENSAMEG00000002697MSI29986.520Ailuropoda_melanoleuca
ENSOMEG00000000146msi2a99100.000ENSACIG00000009475msi2a10094.643Amphilophus_citrinellus
ENSOMEG00000000146msi2a6282.000ENSAOCG00000014822msi2a6982.000Amphiprion_ocellaris
ENSOMEG00000000146msi2a9699.658ENSAPEG00000007706msi2a9399.658Amphiprion_percula
ENSOMEG00000000146msi2a9692.806ENSATEG00000003301-10092.806Anabas_testudineus
ENSOMEG00000000146msi2a100100.000ENSATEG00000010498msi2a100100.000Anabas_testudineus
ENSOMEG00000000146msi2a9393.011ENSACAG00000005452MSI28881.638Anolis_carolinensis
ENSOMEG00000000146msi2a9891.694ENSANAG00000037827MSI210086.585Aotus_nancymaae
ENSOMEG00000000146msi2a10099.674ENSACLG00000007752msi2a10099.674Astatotilapia_calliptera
ENSOMEG00000000146msi2a10096.296ENSAMXG00000032796msi2a10094.087Astyanax_mexicanus
ENSOMEG00000000146msi2a10096.296ENSAMXG00000010474msi2b10093.041Astyanax_mexicanus
ENSOMEG00000000146msi2a9891.362ENSBTAG00000004406MSI29791.362Bos_taurus
ENSOMEG00000000146msi2a7659.514WBGene00003423msi-17361.638Caenorhabditis_elegans
ENSOMEG00000000146msi2a9891.694ENSCJAG00000013998MSI210086.585Callithrix_jacchus
ENSOMEG00000000146msi2a9587.702ENSCAFG00020025620MSI28187.147Canis_lupus_dingo
ENSOMEG00000000146msi2a9892.027ENSCHIG00000016580MSI29492.027Capra_hircus
ENSOMEG00000000146msi2a9688.298ENSCPOG00000034042MSI29988.298Cavia_porcellus
ENSOMEG00000000146msi2a9891.694ENSCCAG00000033927MSI210086.585Cebus_capucinus
ENSOMEG00000000146msi2a9891.694ENSCATG00000040879MSI210086.280Cercocebus_atys
ENSOMEG00000000146msi2a9886.520ENSCLAG00000014325MSI210082.081Chinchilla_lanigera
ENSOMEG00000000146msi2a9891.694ENSCSAG00000005633MSI210086.585Chlorocebus_sabaeus
ENSOMEG00000000146msi2a9165.950ENSCHOG00000008660MSI28386.275Choloepus_hoffmanni
ENSOMEG00000000146msi2a9994.554ENSCPBG00000009942MSI29586.364Chrysemys_picta_bellii
ENSOMEG00000000146msi2a8953.171ENSCING00000018579-9052.632Ciona_intestinalis
ENSOMEG00000000146msi2a8753.667ENSCSAVG00000010397-9556.803Ciona_savignyi
ENSOMEG00000000146msi2a9692.444ENSCANG00000036414MSI210086.520Colobus_angolensis_palliatus
ENSOMEG00000000146msi2a9891.391ENSCGRG00001013330Msi210086.018Cricetulus_griseus_chok1gshd
ENSOMEG00000000146msi2a9886.250ENSCGRG00000003141Msi210086.250Cricetulus_griseus_crigri
ENSOMEG00000000146msi2a9080.928ENSCSEG00000013557msi2a9179.897Cynoglossus_semilaevis
ENSOMEG00000000146msi2a9784.797ENSCSEG00000003266-10075.915Cynoglossus_semilaevis
ENSOMEG00000000146msi2a6177.596ENSCSEG00000013549msi2a10077.596Cynoglossus_semilaevis
ENSOMEG00000000146msi2a100100.000ENSCVAG00000017075msi2a100100.000Cyprinodon_variegatus
ENSOMEG00000000146msi2a10093.846ENSDARG00000033901msi2a10090.206Danio_rerio
ENSOMEG00000000146msi2a10097.119ENSDARG00000032614msi2b10097.030Danio_rerio
ENSOMEG00000000146msi2a9693.056ENSDNOG00000014501MSI210093.056Dasypus_novemcinctus
ENSOMEG00000000146msi2a8381.726ENSDORG00000005394Msi28481.726Dipodomys_ordii
ENSOMEG00000000146msi2a5596.460ENSDORG00000028440-10096.460Dipodomys_ordii
ENSOMEG00000000146msi2a9853.372FBgn0260943Rbp69064.626Drosophila_melanogaster
ENSOMEG00000000146msi2a7272.368ENSETEG00000012450-6472.368Echinops_telfairi
ENSOMEG00000000146msi2a9464.309ENSEBUG00000006732msi2a8764.309Eptatretus_burgeri
ENSOMEG00000000146msi2a9590.301ENSEASG00005002965MSI29779.942Equus_asinus_asinus
ENSOMEG00000000146msi2a9691.739ENSECAG00000011435MSI28791.739Equus_caballus
ENSOMEG00000000146msi2a8877.470ENSEEUG00000007810MSI210077.470Erinaceus_europaeus
ENSOMEG00000000146msi2a10095.902ENSELUG00000001361msi2b10091.899Esox_lucius
ENSOMEG00000000146msi2a9995.205ENSELUG00000011747msi2a9694.837Esox_lucius
ENSOMEG00000000146msi2a9891.694ENSFCAG00000041686MSI210086.585Felis_catus
ENSOMEG00000000146msi2a5175.000ENSFCAG00000033787-8275.000Felis_catus
ENSOMEG00000000146msi2a9886.520ENSFDAG00000016118MSI210086.520Fukomys_damarensis
ENSOMEG00000000146msi2a100100.000ENSFHEG00000000084msi2a9699.342Fundulus_heteroclitus
ENSOMEG00000000146msi2a5997.115ENSGMOG00000007596-10097.115Gadus_morhua
ENSOMEG00000000146msi2a9886.207ENSGALG00000005567MSI210081.214Gallus_gallus
ENSOMEG00000000146msi2a9189.789ENSGAFG00000006974msi2a90100.000Gambusia_affinis
ENSOMEG00000000146msi2a9695.089ENSGAGG00000016542MSI210084.868Gopherus_agassizii
ENSOMEG00000000146msi2a9692.444ENSGGOG00000013182MSI210086.520Gorilla_gorilla
ENSOMEG00000000146msi2a10099.674ENSHBUG00000020800msi2a10099.674Haplochromis_burtoni
ENSOMEG00000000146msi2a9876.803ENSHGLG00000012444MSI210073.121Heterocephalus_glaber_female
ENSOMEG00000000146msi2a5596.491ENSHGLG00100004028-8796.491Heterocephalus_glaber_male
ENSOMEG00000000146msi2a8084.058ENSHGLG00100003744MSI210084.058Heterocephalus_glaber_male
ENSOMEG00000000146msi2a9186.522ENSHCOG00000017241-9870.324Hippocampus_comes
ENSOMEG00000000146msi2a10099.588ENSHCOG00000000266msi2a10093.857Hippocampus_comes
ENSOMEG00000000146msi2a10095.062ENSIPUG00000021097msi2a10095.062Ictalurus_punctatus
ENSOMEG00000000146msi2a10096.296ENSIPUG00000003732msi2b10092.526Ictalurus_punctatus
ENSOMEG00000000146msi2a9688.298ENSSTOG00000007884MSI29988.298Ictidomys_tridecemlineatus
ENSOMEG00000000146msi2a5596.460ENSJJAG00000009467-10096.460Jaculus_jaculus
ENSOMEG00000000146msi2a8078.894ENSJJAG00000006292-10078.392Jaculus_jaculus
ENSOMEG00000000146msi2a10099.588ENSKMAG00000009494msi2a10099.227Kryptolebias_marmoratus
ENSOMEG00000000146msi2a9386.528ENSLBEG00000026223-10086.528Labrus_bergylta
ENSOMEG00000000146msi2a100100.000ENSLBEG00000007061msi2a10095.086Labrus_bergylta
ENSOMEG00000000146msi2a5592.941ENSLACG00000016798MSI29892.308Latimeria_chalumnae
ENSOMEG00000000146msi2a10097.119ENSLOCG00000004675msi2b10094.330Lepisosteus_oculatus
ENSOMEG00000000146msi2a9692.444ENSMFAG00000003775MSI210086.520Macaca_fascicularis
ENSOMEG00000000146msi2a9692.444ENSMMUG00000002069MSI210086.520Macaca_mulatta
ENSOMEG00000000146msi2a9891.694ENSMNEG00000045275MSI210086.585Macaca_nemestrina
ENSOMEG00000000146msi2a9692.444ENSMLEG00000033888MSI210086.520Mandrillus_leucophaeus
ENSOMEG00000000146msi2a10099.674ENSMAMG00000010503msi2a100100.000Mastacembelus_armatus
ENSOMEG00000000146msi2a10094.650ENSMAMG00000002488-9994.040Mastacembelus_armatus
ENSOMEG00000000146msi2a10099.588ENSMZEG00005007676msi2a9699.660Maylandia_zebra
ENSOMEG00000000146msi2a9886.250ENSMAUG00000003862Msi210081.556Mesocricetus_auratus
ENSOMEG00000000146msi2a9891.694ENSMICG00000013598-10086.585Microcebus_murinus
ENSOMEG00000000146msi2a10069.670ENSMICG00000032913-10069.670Microcebus_murinus
ENSOMEG00000000146msi2a9886.520ENSMOCG00000005820Msi210081.792Microtus_ochrogaster
ENSOMEG00000000146msi2a9693.827ENSMMOG00000008348msi2a8499.095Mola_mola
ENSOMEG00000000146msi2a8083.575ENSMODG00000014790MSI210083.575Monodelphis_domestica
ENSOMEG00000000146msi2a100100.000ENSMALG00000000071msi2a100100.000Monopterus_albus
ENSOMEG00000000146msi2a9891.694MGP_CAROLIEiJ_G0016948Msi210096.460Mus_caroli
ENSOMEG00000000146msi2a9891.694ENSMUSG00000069769Msi210096.460Mus_musculus
ENSOMEG00000000146msi2a9891.694MGP_PahariEiJ_G0018079Msi210096.460Mus_pahari
ENSOMEG00000000146msi2a9891.694MGP_SPRETEiJ_G0017795Msi210096.460Mus_spretus
ENSOMEG00000000146msi2a9891.694ENSMPUG00000015377MSI29791.694Mustela_putorius_furo
ENSOMEG00000000146msi2a9891.694ENSMLUG00000007865MSI29791.694Myotis_lucifugus
ENSOMEG00000000146msi2a9886.520ENSNGAG00000017807Msi210081.792Nannospalax_galili
ENSOMEG00000000146msi2a10099.742ENSNBRG00000014596msi2a10099.742Neolamprologus_brichardi
ENSOMEG00000000146msi2a9692.444ENSNLEG00000008059MSI29692.891Nomascus_leucogenys
ENSOMEG00000000146msi2a7283.553ENSOPRG00000000872-6483.553Ochotona_princeps
ENSOMEG00000000146msi2a9886.520ENSODEG00000011974MSI210082.081Octodon_degus
ENSOMEG00000000146msi2a62100.000ENSONIG00000001972msi2a84100.000Oreochromis_niloticus
ENSOMEG00000000146msi2a9792.308ENSOANG00000005667MSI29976.123Ornithorhynchus_anatinus
ENSOMEG00000000146msi2a9891.694ENSOCUG00000010440MSI29791.694Oryctolagus_cuniculus
ENSOMEG00000000146msi2a100100.000ENSORLG00000009671msi2a100100.000Oryzias_latipes
ENSOMEG00000000146msi2a100100.000ENSORLG00020021556msi2a100100.000Oryzias_latipes_hni
ENSOMEG00000000146msi2a100100.000ENSORLG00015004592msi2a100100.000Oryzias_latipes_hsok
ENSOMEG00000000146msi2a9888.040ENSOGAG00000005621MSI29988.040Otolemur_garnettii
ENSOMEG00000000146msi2a9886.520ENSPPAG00000037697MSI210086.520Pan_paniscus
ENSOMEG00000000146msi2a9891.694ENSPPRG00000001848MSI29491.694Panthera_pardus
ENSOMEG00000000146msi2a9687.781ENSPTIG00000021678MSI29687.781Panthera_tigris_altaica
ENSOMEG00000000146msi2a7875.314ENSPTIG00000021873-9175.314Panthera_tigris_altaica
ENSOMEG00000000146msi2a9692.444ENSPTRG00000009437MSI210086.520Pan_troglodytes
ENSOMEG00000000146msi2a9891.694ENSPANG00000022319MSI210086.585Papio_anubis
ENSOMEG00000000146msi2a9590.102ENSPKIG00000007038-9693.004Paramormyrops_kingsleyae
ENSOMEG00000000146msi2a5295.604ENSPKIG00000017107-8195.604Paramormyrops_kingsleyae
ENSOMEG00000000146msi2a10095.062ENSPSIG00000008618MSI210086.453Pelodiscus_sinensis
ENSOMEG00000000146msi2a9698.973ENSPMGG00000005888msi2a9398.973Periophthalmus_magnuspinnatus
ENSOMEG00000000146msi2a5596.460ENSPEMG00000021793-10096.460Peromyscus_maniculatus_bairdii
ENSOMEG00000000146msi2a9787.937ENSPCIG00000006063MSI210078.535Phascolarctos_cinereus
ENSOMEG00000000146msi2a6199.048ENSPFOG00000019337MSI29299.048Poecilia_formosa
ENSOMEG00000000146msi2a62100.000ENSPLAG00000000436msi2a72100.000Poecilia_latipinna
ENSOMEG00000000146msi2a6288.971ENSPMEG00000013247msi2a7588.971Poecilia_mexicana
ENSOMEG00000000146msi2a100100.000ENSPREG00000000881msi2a10094.840Poecilia_reticulata
ENSOMEG00000000146msi2a9989.916ENSPPYG00000008244-10089.916Pongo_abelii
ENSOMEG00000000146msi2a9264.286ENSPCAG00000010552MSI210064.286Procavia_capensis
ENSOMEG00000000146msi2a5595.420ENSPCOG00000019195-9395.420Propithecus_coquereli
ENSOMEG00000000146msi2a9685.324ENSPVAG00000017053MSI210085.324Pteropus_vampyrus
ENSOMEG00000000146msi2a10099.674ENSPNYG00000018393msi2a10099.674Pundamilia_nyererei
ENSOMEG00000000146msi2a10096.296ENSPNAG00000000844msi2b10092.802Pygocentrus_nattereri
ENSOMEG00000000146msi2a10095.885ENSPNAG00000014957msi2a10094.344Pygocentrus_nattereri
ENSOMEG00000000146msi2a9692.806ENSRNOG00000025338Msi210092.806Rattus_norvegicus
ENSOMEG00000000146msi2a5173.626ENSRBIG00000032064-7290.909Rhinopithecus_bieti
ENSOMEG00000000146msi2a5596.491ENSRROG00000034421-9296.491Rhinopithecus_roxellana
ENSOMEG00000000146msi2a9692.857ENSSBOG00000026425MSI210086.520Saimiri_boliviensis_boliviensis
ENSOMEG00000000146msi2a9886.520ENSSHAG00000008672MSI210086.520Sarcophilus_harrisii
ENSOMEG00000000146msi2a9887.708ENSSFOG00015021687-9793.243Scleropages_formosus
ENSOMEG00000000146msi2a10083.673ENSSFOG00015012168msi2b10072.059Scleropages_formosus
ENSOMEG00000000146msi2a100100.000ENSSMAG00000018484msi2a100100.000Scophthalmus_maximus
ENSOMEG00000000146msi2a100100.000ENSSDUG00000014507msi2a100100.000Seriola_dumerili
ENSOMEG00000000146msi2a9787.622ENSSDUG00000021968-9994.040Seriola_dumerili
ENSOMEG00000000146msi2a100100.000ENSSLDG00000017172msi2a10095.086Seriola_lalandi_dorsalis
ENSOMEG00000000146msi2a6292.405ENSSPUG00000000913-9492.405Sphenodon_punctatus
ENSOMEG00000000146msi2a100100.000ENSSPAG00000017793msi2a96100.000Stegastes_partitus
ENSOMEG00000000146msi2a9891.694ENSSSCG00000038505MSI29692.177Sus_scrofa
ENSOMEG00000000146msi2a8084.058ENSTGUG00000008452MSI210084.058Taeniopygia_guttata
ENSOMEG00000000146msi2a10095.425ENSTRUG00000021248msi2a9593.909Takifugu_rubripes
ENSOMEG00000000146msi2a7977.686ENSTBEG00000001241MSI27377.686Tupaia_belangeri
ENSOMEG00000000146msi2a9684.454ENSTTRG00000002189MSI29194.737Tursiops_truncatus
ENSOMEG00000000146msi2a9891.694ENSUAMG00000000700MSI29693.357Ursus_americanus
ENSOMEG00000000146msi2a8992.213ENSUMAG00000000505MSI29593.782Ursus_maritimus
ENSOMEG00000000146msi2a5981.868ENSVPAG00000006837-6281.868Vicugna_pacos
ENSOMEG00000000146msi2a10086.254ENSVVUG00000011783MSI29891.324Vulpes_vulpes
ENSOMEG00000000146msi2a10097.680ENSXCOG00000006113msi2a10097.680Xiphophorus_couchianus
ENSOMEG00000000146msi2a100100.000ENSXMAG00000000608msi2a100100.000Xiphophorus_maculatus

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