EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000171 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3666 bases
Position: chrNVQA01000024.1:19578506-19582171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000025793	FDF	PF09532.10	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000006212	-	618	-	ENSOMEP00000025793	205 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000000171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000171	-	83	33.484	ENSOMEG00000023917	lsm14b	62	34.914

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000171	-	97	38.314	ENSG00000149657	LSM14B	57	36.184	Homo_sapiens
ENSOMEG00000000171	-	83	36.000	ENSAPOG00000001780	lsm14b	62	38.136	Acanthochromis_polyacanthus
ENSOMEG00000000171	-	79	45.181	ENSAPOG00000010003	-	51	66.234	Acanthochromis_polyacanthus
ENSOMEG00000000171	-	83	39.320	ENSACIG00000012266	lsm14b	62	40.889	Amphilophus_citrinellus
ENSOMEG00000000171	-	86	56.650	ENSACIG00000003147	LSM14B	94	56.338	Amphilophus_citrinellus
ENSOMEG00000000171	-	92	48.235	ENSAOCG00000006667	LSM14B	66	47.059	Amphiprion_ocellaris
ENSOMEG00000000171	-	83	36.000	ENSAOCG00000012380	lsm14b	62	38.655	Amphiprion_ocellaris
ENSOMEG00000000171	-	83	39.524	ENSAPEG00000023633	lsm14b	62	39.640	Amphiprion_percula
ENSOMEG00000000171	-	83	37.900	ENSATEG00000016603	lsm14b	64	39.167	Anabas_testudineus
ENSOMEG00000000171	-	86	60.150	ENSATEG00000015895	LSM14B	58	64.000	Anabas_testudineus
ENSOMEG00000000171	-	85	33.333	ENSACAG00000016195	LSM14B	65	35.600	Anolis_carolinensis
ENSOMEG00000000171	-	97	38.760	ENSANAG00000037915	LSM14B	64	36.047	Aotus_nancymaae
ENSOMEG00000000171	-	83	35.586	ENSACLG00000019663	lsm14b	63	38.912	Astatotilapia_calliptera
ENSOMEG00000000171	-	83	34.025	ENSAMXG00000002865	lsm14b	65	36.434	Astyanax_mexicanus
ENSOMEG00000000171	-	97	39.147	ENSCJAG00000014434	LSM14B	64	38.866	Callithrix_jacchus
ENSOMEG00000000171	-	97	40.698	ENSCAFG00020022150	LSM14B	65	37.692	Canis_lupus_dingo
ENSOMEG00000000171	-	96	36.066	ENSCHIG00000022681	-	65	34.746	Capra_hircus
ENSOMEG00000000171	-	97	39.922	ENSCHIG00000010284	-	64	40.486	Capra_hircus
ENSOMEG00000000171	-	97	37.931	ENSTSYG00000031914	LSM14B	64	36.842	Carlito_syrichta
ENSOMEG00000000171	-	97	38.697	ENSCAPG00000013059	LSM14B	72	38.057	Cavia_aperea
ENSOMEG00000000171	-	97	39.080	ENSCPOG00000038080	LSM14B	72	39.676	Cavia_porcellus
ENSOMEG00000000171	-	97	38.314	ENSCLAG00000003186	LSM14B	72	39.271	Chinchilla_lanigera
ENSOMEG00000000171	-	63	40.972	ENSCHOG00000006997	-	51	40.602	Choloepus_hoffmanni
ENSOMEG00000000171	-	97	38.314	ENSCANG00000036986	LSM14B	53	41.451	Colobus_angolensis_palliatus
ENSOMEG00000000171	-	97	39.535	ENSCGRG00001018399	Lsm14b	64	38.462	Cricetulus_griseus_chok1gshd
ENSOMEG00000000171	-	85	45.000	ENSCGRG00000002484	-	87	43.386	Cricetulus_griseus_crigri
ENSOMEG00000000171	-	97	34.343	ENSCGRG00000006111	-	64	39.801	Cricetulus_griseus_crigri
ENSOMEG00000000171	-	81	37.778	ENSCSEG00000004722	lsm14b	65	38.211	Cynoglossus_semilaevis
ENSOMEG00000000171	-	89	54.000	ENSCVAG00000012433	-	93	53.000	Cyprinodon_variegatus
ENSOMEG00000000171	-	85	37.768	ENSDARG00000025386	lsm14b	64	39.837	Danio_rerio
ENSOMEG00000000171	-	97	33.670	ENSDNOG00000025246	LSM14B	60	40.415	Dasypus_novemcinctus
ENSOMEG00000000171	-	97	39.535	ENSDORG00000016683	Lsm14b	63	39.271	Dipodomys_ordii
ENSOMEG00000000171	-	87	33.333	ENSETEG00000001869	-	64	32.645	Echinops_telfairi
ENSOMEG00000000171	-	73	35.122	ENSETEG00000011188	-	89	33.171	Echinops_telfairi
ENSOMEG00000000171	-	97	44.255	ENSEASG00005023218	LSM14B	92	43.891	Equus_asinus_asinus
ENSOMEG00000000171	-	97	39.922	ENSECAG00000010659	LSM14B	64	40.081	Equus_caballus
ENSOMEG00000000171	-	83	40.708	ENSELUG00000016299	LSM14B	64	40.329	Esox_lucius
ENSOMEG00000000171	-	90	40.084	ENSELUG00000005780	lsm14b	63	40.084	Esox_lucius
ENSOMEG00000000171	-	97	41.085	ENSFCAG00000003248	LSM14B	64	40.486	Felis_catus
ENSOMEG00000000171	-	97	38.462	ENSFDAG00000002214	LSM14B	72	37.751	Fukomys_damarensis
ENSOMEG00000000171	-	85	35.931	ENSFHEG00000006237	lsm14b	64	36.032	Fundulus_heteroclitus
ENSOMEG00000000171	-	64	41.837	ENSFHEG00000003362	LSM14B	52	40.488	Fundulus_heteroclitus
ENSOMEG00000000171	-	93	42.308	ENSGMOG00000017115	lsm14b	60	42.308	Gadus_morhua
ENSOMEG00000000171	-	85	36.250	ENSGALG00000005125	LSM14B	65	37.549	Gallus_gallus
ENSOMEG00000000171	-	91	65.306	ENSGAFG00000013723	LSM14B	94	65.306	Gambusia_affinis
ENSOMEG00000000171	-	85	37.445	ENSGACG00000009973	lsm14b	64	38.333	Gasterosteus_aculeatus
ENSOMEG00000000171	-	73	34.591	ENSGAGG00000004106	LSM14B	77	36.464	Gopherus_agassizii
ENSOMEG00000000171	-	97	38.314	ENSGGOG00000005630	LSM14B	60	41.969	Gorilla_gorilla
ENSOMEG00000000171	-	97	39.147	ENSHGLG00000015055	LSM14B	64	40.081	Heterocephalus_glaber_female
ENSOMEG00000000171	-	96	38.672	ENSHGLG00100015273	LSM14B	73	39.592	Heterocephalus_glaber_male
ENSOMEG00000000171	-	82	45.745	ENSHCOG00000004867	lsm14b	89	45.361	Hippocampus_comes
ENSOMEG00000000171	-	91	46.774	ENSHCOG00000018747	LSM14B	67	46.774	Hippocampus_comes
ENSOMEG00000000171	-	83	36.596	ENSIPUG00000014946	lsm14b	61	37.903	Ictalurus_punctatus
ENSOMEG00000000171	-	97	39.464	ENSSTOG00000020482	LSM14B	72	40.081	Ictidomys_tridecemlineatus
ENSOMEG00000000171	-	97	39.535	ENSJJAG00000012728	Lsm14b	65	38.057	Jaculus_jaculus
ENSOMEG00000000171	-	72	45.545	ENSKMAG00000012834	-	56	60.938	Kryptolebias_marmoratus
ENSOMEG00000000171	-	83	34.375	ENSKMAG00000017524	lsm14b	64	33.197	Kryptolebias_marmoratus
ENSOMEG00000000171	-	91	57.653	ENSLBEG00000007951	LSM14B	92	55.612	Labrus_bergylta
ENSOMEG00000000171	-	83	37.447	ENSLOCG00000003746	lsm14b	70	39.683	Lepisosteus_oculatus
ENSOMEG00000000171	-	97	39.147	ENSLAFG00000007492	LSM14B	71	39.676	Loxodonta_africana
ENSOMEG00000000171	-	97	37.931	ENSMLEG00000040895	LSM14B	53	41.451	Mandrillus_leucophaeus
ENSOMEG00000000171	-	96	49.421	ENSMAMG00000024124	LSM14B	65	46.531	Mastacembelus_armatus
ENSOMEG00000000171	-	83	33.333	ENSMAMG00000020539	lsm14b	65	33.878	Mastacembelus_armatus
ENSOMEG00000000171	-	83	34.071	ENSMZEG00005000987	lsm14b	63	37.449	Maylandia_zebra
ENSOMEG00000000171	-	85	38.235	ENSMGAG00000005300	LSM14B	71	37.849	Meleagris_gallopavo
ENSOMEG00000000171	-	97	39.535	ENSMAUG00000020700	Lsm14b	64	38.462	Mesocricetus_auratus
ENSOMEG00000000171	-	97	39.922	ENSMICG00000014675	LSM14B	64	38.057	Microcebus_murinus
ENSOMEG00000000171	-	53	48.649	ENSMOCG00000005119	-	60	38.202	Microtus_ochrogaster
ENSOMEG00000000171	-	97	38.760	ENSMOCG00000020600	Lsm14b	62	39.500	Microtus_ochrogaster
ENSOMEG00000000171	-	82	36.842	ENSMMOG00000020042	lsm14b	67	36.145	Mola_mola
ENSOMEG00000000171	-	85	55.981	ENSMMOG00000017321	LSM14B	62	56.561	Mola_mola
ENSOMEG00000000171	-	85	44.726	ENSMALG00000022251	LSM14B	64	43.320	Monopterus_albus
ENSOMEG00000000171	-	88	41.038	ENSMALG00000004783	lsm14b	61	40.094	Monopterus_albus
ENSOMEG00000000171	-	97	40.310	MGP_CAROLIEiJ_G0024770	Lsm14b	64	38.462	Mus_caroli
ENSOMEG00000000171	-	97	40.310	ENSMUSG00000039108	Lsm14b	64	38.462	Mus_musculus
ENSOMEG00000000171	-	97	39.922	MGP_PahariEiJ_G0026214	Lsm14b	64	38.462	Mus_pahari
ENSOMEG00000000171	-	97	40.310	MGP_SPRETEiJ_G0025693	Lsm14b	64	38.462	Mus_spretus
ENSOMEG00000000171	-	82	37.391	ENSMLUG00000000304	LSM14B	60	53.061	Myotis_lucifugus
ENSOMEG00000000171	-	63	46.528	ENSNGAG00000016550	Lsm14b	58	47.368	Nannospalax_galili
ENSOMEG00000000171	-	97	38.314	ENSNLEG00000015757	LSM14B	53	41.969	Nomascus_leucogenys
ENSOMEG00000000171	-	97	39.080	ENSODEG00000004099	LSM14B	64	38.057	Octodon_degus
ENSOMEG00000000171	-	83	35.135	ENSONIG00000020318	lsm14b	63	39.749	Oreochromis_niloticus
ENSOMEG00000000171	-	51	42.742	ENSOANG00000003370	LSM14B	50	32.237	Ornithorhynchus_anatinus
ENSOMEG00000000171	-	97	39.147	ENSOCUG00000006279	LSM14B	72	37.652	Oryctolagus_cuniculus
ENSOMEG00000000171	-	83	33.484	ENSORLG00000013525	lsm14b	62	35.776	Oryzias_latipes
ENSOMEG00000000171	-	87	61.538	ENSORLG00000028353	LSM14B	51	77.165	Oryzias_latipes
ENSOMEG00000000171	-	87	64.758	ENSORLG00020018191	-	92	62.869	Oryzias_latipes_hni
ENSOMEG00000000171	-	83	34.389	ENSORLG00020020553	lsm14b	62	35.776	Oryzias_latipes_hni
ENSOMEG00000000171	-	87	62.553	ENSORLG00015013157	LSM14B	51	78.740	Oryzias_latipes_hsok
ENSOMEG00000000171	-	83	34.389	ENSORLG00015016862	lsm14b	62	35.776	Oryzias_latipes_hsok
ENSOMEG00000000171	-	97	38.314	ENSPPAG00000035799	LSM14B	50	41.451	Pan_paniscus
ENSOMEG00000000171	-	97	41.473	ENSPPRG00000009197	LSM14B	64	41.296	Panthera_pardus
ENSOMEG00000000171	-	96	44.589	ENSPTIG00000021518	LSM14B	96	43.891	Panthera_tigris_altaica
ENSOMEG00000000171	-	85	38.839	ENSPKIG00000003275	lsm14b	63	39.407	Paramormyrops_kingsleyae
ENSOMEG00000000171	-	85	37.872	ENSPSIG00000014762	LSM14B	72	38.306	Pelodiscus_sinensis
ENSOMEG00000000171	-	97	39.922	ENSPEMG00000017688	Lsm14b	65	40.081	Peromyscus_maniculatus_bairdii
ENSOMEG00000000171	-	85	37.339	ENSPCIG00000013405	LSM14B	64	36.965	Phascolarctos_cinereus
ENSOMEG00000000171	-	88	34.615	ENSPFOG00000005631	lsm14b	64	32.787	Poecilia_formosa
ENSOMEG00000000171	-	82	51.131	ENSPLAG00000005793	LSM14B	64	49.576	Poecilia_latipinna
ENSOMEG00000000171	-	88	34.615	ENSPLAG00000002449	lsm14b	63	33.761	Poecilia_latipinna
ENSOMEG00000000171	-	81	51.598	ENSPMEG00000022953	LSM14B	64	49.576	Poecilia_mexicana
ENSOMEG00000000171	-	85	33.921	ENSPMEG00000000745	lsm14b	63	34.615	Poecilia_mexicana
ENSOMEG00000000171	-	86	54.505	ENSPREG00000007828	LSM14B	93	53.879	Poecilia_reticulata
ENSOMEG00000000171	-	97	39.080	ENSPCOG00000013625	LSM14B	64	36.437	Propithecus_coquereli
ENSOMEG00000000171	-	83	41.000	ENSPNAG00000012777	lsm14b	65	39.113	Pygocentrus_nattereri
ENSOMEG00000000171	-	97	37.984	ENSRBIG00000033461	LSM14B	53	41.451	Rhinopithecus_bieti
ENSOMEG00000000171	-	97	38.314	ENSRROG00000042949	LSM14B	60	41.969	Rhinopithecus_roxellana
ENSOMEG00000000171	-	97	38.372	ENSSBOG00000032820	LSM14B	72	36.434	Saimiri_boliviensis_boliviensis
ENSOMEG00000000171	-	85	37.179	ENSSHAG00000015528	LSM14B	69	36.822	Sarcophilus_harrisii
ENSOMEG00000000171	-	83	39.301	ENSSFOG00015004627	lsm14b	66	39.837	Scleropages_formosus
ENSOMEG00000000171	-	83	36.245	ENSSMAG00000012725	lsm14b	63	37.131	Scophthalmus_maximus
ENSOMEG00000000171	-	83	36.564	ENSSDUG00000020977	lsm14b	63	37.815	Seriola_dumerili
ENSOMEG00000000171	-	86	53.112	ENSSDUG00000022770	LSM14B	65	51.220	Seriola_dumerili
ENSOMEG00000000171	-	86	50.410	ENSSLDG00000011354	-	93	45.669	Seriola_lalandi_dorsalis
ENSOMEG00000000171	-	73	34.975	ENSSARG00000007749	-	83	37.363	Sorex_araneus
ENSOMEG00000000171	-	75	32.547	ENSSPUG00000014360	LSM14B	60	31.696	Sphenodon_punctatus
ENSOMEG00000000171	-	83	41.791	ENSSPAG00000020915	lsm14b	60	41.038	Stegastes_partitus
ENSOMEG00000000171	-	95	43.969	ENSSPAG00000018854	-	94	41.463	Stegastes_partitus
ENSOMEG00000000171	-	97	40.310	ENSSSCG00000026052	LSM14B	61	41.117	Sus_scrofa
ENSOMEG00000000171	-	85	38.819	ENSTGUG00000007884	LSM14B	72	36.800	Taeniopygia_guttata
ENSOMEG00000000171	-	94	34.538	ENSTRUG00000011354	lsm14b	63	33.755	Takifugu_rubripes
ENSOMEG00000000171	-	86	46.186	ENSTRUG00000001529	LSM14B	64	47.755	Takifugu_rubripes
ENSOMEG00000000171	-	85	38.889	ENSTNIG00000002445	lsm14b	65	39.431	Tetraodon_nigroviridis
ENSOMEG00000000171	-	97	41.085	ENSUAMG00000025298	LSM14B	66	38.077	Ursus_americanus
ENSOMEG00000000171	-	97	41.085	ENSUMAG00000000480	LSM14B	66	38.077	Ursus_maritimus
ENSOMEG00000000171	-	97	40.310	ENSVVUG00000015920	LSM14B	93	36.923	Vulpes_vulpes
ENSOMEG00000000171	-	73	34.300	ENSXETG00000001997	lsm14b	63	33.816	Xenopus_tropicalis
ENSOMEG00000000171	-	83	34.821	ENSXMAG00000010013	lsm14b	63	35.745	Xiphophorus_maculatus