EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000211 (Gene tree)
Gene ID: 112151729
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5743 bases
Position: chrNVQA01000016.1:13208247-13213989
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000007392	MMR_HSR1	PF01926.23	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000004205	-	2734	-	ENSOMEP00000007392	279 (aa)	-	-
ENSOMET00000004226	-	471	-	ENSOMEP00000007385	156 (aa)	-	-
ENSOMET00000004230	-	240	-	ENSOMEP00000026559	79 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000000211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000211	-	63	34.536	ENSOMEG00000001352	arfrp1	93	34.536
ENSOMEG00000000211	-	57	42.073	ENSOMEG00000016904	arl14	90	42.073
ENSOMEG00000000211	-	59	46.784	ENSOMEG00000007253	arl4cb	89	46.784
ENSOMEG00000000211	-	59	30.723	ENSOMEG00000010187	arl13b	67	30.723
ENSOMEG00000000211	-	59	41.566	ENSOMEG00000007419	arl11	90	41.566
ENSOMEG00000000211	-	63	80.791	ENSOMEG00000007598	-	98	80.791
ENSOMEG00000000211	-	64	57.303	ENSOMEG00000023497	arl1	95	57.303
ENSOMEG00000000211	-	64	91.061	ENSOMEG00000020821	ARF5	99	91.061
ENSOMEG00000000211	-	62	81.034	ENSOMEG00000023784	-	97	81.034
ENSOMEG00000000211	-	63	79.661	ENSOMEG00000009575	arf3b	98	79.661
ENSOMEG00000000211	-	63	83.051	ENSOMEG00000002559	arf2b	98	83.051
ENSOMEG00000000211	-	64	42.077	ENSOMEG00000017204	ARL6	98	42.077
ENSOMEG00000000211	-	58	44.444	ENSOMEG00000007691	arl3	95	44.444
ENSOMEG00000000211	-	64	47.826	ENSOMEG00000003868	arl4aa	93	47.826
ENSOMEG00000000211	-	58	44.720	ENSOMEG00000003861	-	88	44.720
ENSOMEG00000000211	-	62	45.402	ENSOMEG00000003634	arl8	97	45.402
ENSOMEG00000000211	-	59	41.667	ENSOMEG00000023152	-	86	41.667
ENSOMEG00000000211	-	51	36.111	ENSOMEG00000001959	arl8ba	77	36.111
ENSOMEG00000000211	-	70	38.974	ENSOMEG00000021718	arl5c	95	43.195
ENSOMEG00000000211	-	58	30.636	ENSOMEG00000012020	-	87	30.636
ENSOMEG00000000211	-	63	79.661	ENSOMEG00000017070	-	98	79.661
ENSOMEG00000000211	-	57	44.512	ENSOMEG00000004308	arl4d	81	44.512
ENSOMEG00000000211	-	56	61.006	ENSOMEG00000022678	-	98	61.006
ENSOMEG00000000211	-	60	43.195	ENSOMEG00000005057	arl3l2	90	43.195
ENSOMEG00000000211	-	63	45.198	ENSOMEG00000017228	arl5a	98	45.198
ENSOMEG00000000211	-	51	36.111	ENSOMEG00000023857	arl8bb	82	36.111
ENSOMEG00000000211	-	59	47.273	ENSOMEG00000008521	arl2	89	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000211	-	64	87.151	ENSG00000004059	ARF5	100	87.500	Homo_sapiens
ENSOMEG00000000211	-	65	93.333	ENSAPOG00000000667	-	100	93.333	Acanthochromis_polyacanthus
ENSOMEG00000000211	-	64	87.151	ENSAMEG00000004635	ARF5	99	87.151	Ailuropoda_melanoleuca
ENSOMEG00000000211	-	65	95.556	ENSACIG00000000467	-	100	95.556	Amphilophus_citrinellus
ENSOMEG00000000211	-	63	68.927	ENSACIG00000014610	zgc:110286	98	68.927	Amphilophus_citrinellus
ENSOMEG00000000211	-	64	91.061	ENSACIG00000005843	arf5	99	91.061	Amphilophus_citrinellus
ENSOMEG00000000211	-	65	88.889	ENSAOCG00000023329	arf5	100	88.889	Amphiprion_ocellaris
ENSOMEG00000000211	-	65	92.778	ENSAOCG00000008113	-	100	92.778	Amphiprion_ocellaris
ENSOMEG00000000211	-	65	88.889	ENSAPEG00000024614	arf5	100	88.889	Amphiprion_percula
ENSOMEG00000000211	-	65	92.778	ENSAPEG00000003087	-	100	92.778	Amphiprion_percula
ENSOMEG00000000211	-	65	97.778	ENSATEG00000001302	-	100	97.778	Anabas_testudineus
ENSOMEG00000000211	-	64	90.503	ENSATEG00000003053	ARF5	99	90.503	Anabas_testudineus
ENSOMEG00000000211	-	64	87.151	ENSANAG00000026446	ARF5	99	87.151	Aotus_nancymaae
ENSOMEG00000000211	-	64	91.620	ENSACLG00000005705	arf5	99	91.620	Astatotilapia_calliptera
ENSOMEG00000000211	-	65	96.111	ENSACLG00000025604	-	100	96.111	Astatotilapia_calliptera
ENSOMEG00000000211	-	64	91.620	ENSAMXG00000004249	-	99	91.620	Astyanax_mexicanus
ENSOMEG00000000211	-	64	91.620	ENSAMXG00000038224	-	99	91.620	Astyanax_mexicanus
ENSOMEG00000000211	-	64	89.944	ENSAMXG00000031774	ARF5	99	89.944	Astyanax_mexicanus
ENSOMEG00000000211	-	64	88.827	ENSAMXG00000031467	arf4a	99	88.827	Astyanax_mexicanus
ENSOMEG00000000211	-	64	87.151	ENSBTAG00000009366	ARF5	99	87.151	Bos_taurus
ENSOMEG00000000211	-	64	84.916	WBGene00000183	arf-3	99	84.916	Caenorhabditis_elegans
ENSOMEG00000000211	-	64	87.151	ENSCJAG00000017604	ARF5	99	87.151	Callithrix_jacchus
ENSOMEG00000000211	-	64	73.239	ENSCAFG00020021629	ARF5	99	73.239	Canis_lupus_dingo
ENSOMEG00000000211	-	64	87.151	ENSCHIG00000018906	ARF5	99	87.151	Capra_hircus
ENSOMEG00000000211	-	64	85.556	ENSCPOG00000006239	ARF5	99	85.556	Cavia_porcellus
ENSOMEG00000000211	-	64	87.151	ENSCCAG00000027943	-	99	87.151	Cebus_capucinus
ENSOMEG00000000211	-	64	87.151	ENSCATG00000010217	ARF5	99	87.151	Cercocebus_atys
ENSOMEG00000000211	-	64	87.151	ENSCLAG00000007930	ARF5	99	87.151	Chinchilla_lanigera
ENSOMEG00000000211	-	64	87.151	ENSCSAG00000010208	ARF5	99	87.151	Chlorocebus_sabaeus
ENSOMEG00000000211	-	65	76.111	ENSCING00000004846	-	100	76.111	Ciona_intestinalis
ENSOMEG00000000211	-	65	74.725	ENSCSAVG00000001959	-	100	74.725	Ciona_savignyi
ENSOMEG00000000211	-	57	86.875	ENSCANG00000037234	ARF5	98	86.875	Colobus_angolensis_palliatus
ENSOMEG00000000211	-	64	87.151	ENSCGRG00001024919	Arf5	99	87.151	Cricetulus_griseus_chok1gshd
ENSOMEG00000000211	-	64	86.034	ENSCSEG00000006004	arf5	99	86.034	Cynoglossus_semilaevis
ENSOMEG00000000211	-	65	93.889	ENSCVAG00000011381	-	100	93.889	Cyprinodon_variegatus
ENSOMEG00000000211	-	64	91.620	ENSCVAG00000007314	-	99	91.620	Cyprinodon_variegatus
ENSOMEG00000000211	-	64	91.620	ENSCVAG00000009124	ARF5	99	91.620	Cyprinodon_variegatus
ENSOMEG00000000211	-	64	88.268	ENSDARG00000045989	arf4a	99	88.268	Danio_rerio
ENSOMEG00000000211	-	66	68.478	ENSDARG00000074210	ARF5	90	68.478	Danio_rerio
ENSOMEG00000000211	-	64	92.179	ENSDARG00000070472	arf5	99	92.179	Danio_rerio
ENSOMEG00000000211	-	64	91.620	ENSDARG00000113899	zgc:77650	99	91.620	Danio_rerio
ENSOMEG00000000211	-	64	87.151	ENSDORG00000000325	Arf5	99	87.151	Dipodomys_ordii
ENSOMEG00000000211	-	64	83.240	FBgn0013749	Arf102F	99	83.240	Drosophila_melanogaster
ENSOMEG00000000211	-	62	83.908	ENSETEG00000009275	ARF5	99	83.908	Echinops_telfairi
ENSOMEG00000000211	-	64	71.508	ENSEBUG00000004484	-	99	71.508	Eptatretus_burgeri
ENSOMEG00000000211	-	64	84.358	ENSEBUG00000014420	-	99	84.358	Eptatretus_burgeri
ENSOMEG00000000211	-	64	73.743	ENSELUG00000014428	arf4	99	73.743	Esox_lucius
ENSOMEG00000000211	-	64	87.151	ENSFCAG00000005482	ARF5	99	87.151	Felis_catus
ENSOMEG00000000211	-	64	91.061	ENSFHEG00000023119	arf5	99	91.061	Fundulus_heteroclitus
ENSOMEG00000000211	-	64	89.385	ENSGMOG00000019109	-	99	89.385	Gadus_morhua
ENSOMEG00000000211	-	64	87.151	ENSGMOG00000008747	arf5	99	87.151	Gadus_morhua
ENSOMEG00000000211	-	65	91.667	ENSGAFG00000005163	-	100	91.667	Gambusia_affinis
ENSOMEG00000000211	-	64	91.620	ENSGAFG00000018703	arf5	99	91.620	Gambusia_affinis
ENSOMEG00000000211	-	65	90.556	ENSGACG00000012500	-	100	90.556	Gasterosteus_aculeatus
ENSOMEG00000000211	-	64	91.061	ENSGACG00000000686	arf5	99	91.061	Gasterosteus_aculeatus
ENSOMEG00000000211	-	64	87.709	ENSGAGG00000000231	ARF5	99	87.709	Gopherus_agassizii
ENSOMEG00000000211	-	64	87.151	ENSGGOG00000016749	ARF5	99	87.151	Gorilla_gorilla
ENSOMEG00000000211	-	64	91.620	ENSHBUG00000008546	arf5	99	91.620	Haplochromis_burtoni
ENSOMEG00000000211	-	65	96.111	ENSHBUG00000011041	-	100	96.111	Haplochromis_burtoni
ENSOMEG00000000211	-	64	87.151	ENSHGLG00000007494	ARF5	99	87.151	Heterocephalus_glaber_female
ENSOMEG00000000211	-	64	86.034	ENSHGLG00100006040	ARF5	60	86.034	Heterocephalus_glaber_male
ENSOMEG00000000211	-	64	90.503	ENSHCOG00000015577	-	100	90.503	Hippocampus_comes
ENSOMEG00000000211	-	65	69.444	ENSIPUG00000006913	-	70	69.444	Ictalurus_punctatus
ENSOMEG00000000211	-	64	88.268	ENSIPUG00000007016	arf4	99	88.268	Ictalurus_punctatus
ENSOMEG00000000211	-	64	91.061	ENSIPUG00000004159	Arf5	99	91.061	Ictalurus_punctatus
ENSOMEG00000000211	-	64	91.061	ENSIPUG00000004215	arf5	99	91.061	Ictalurus_punctatus
ENSOMEG00000000211	-	64	87.151	ENSSTOG00000002104	ARF5	99	87.151	Ictidomys_tridecemlineatus
ENSOMEG00000000211	-	64	87.151	ENSJJAG00000005105	Arf5	99	87.151	Jaculus_jaculus
ENSOMEG00000000211	-	65	95.000	ENSKMAG00000012816	-	100	95.000	Kryptolebias_marmoratus
ENSOMEG00000000211	-	64	87.079	ENSLBEG00000012002	-	98	87.079	Labrus_bergylta
ENSOMEG00000000211	-	64	89.944	ENSLBEG00000026532	arf5	99	89.944	Labrus_bergylta
ENSOMEG00000000211	-	64	87.151	ENSLAFG00000011469	ARF5	99	87.151	Loxodonta_africana
ENSOMEG00000000211	-	64	87.151	ENSMFAG00000019772	ARF5	99	87.151	Macaca_fascicularis
ENSOMEG00000000211	-	64	87.151	ENSMMUG00000046381	ARF5	99	87.151	Macaca_mulatta
ENSOMEG00000000211	-	64	87.151	ENSMNEG00000040893	ARF5	99	87.151	Macaca_nemestrina
ENSOMEG00000000211	-	65	97.778	ENSMAMG00000008223	-	100	97.778	Mastacembelus_armatus
ENSOMEG00000000211	-	64	89.944	ENSMAMG00000021160	arf5	99	89.944	Mastacembelus_armatus
ENSOMEG00000000211	-	86	72.835	ENSMZEG00005015033	arf5	90	72.835	Maylandia_zebra
ENSOMEG00000000211	-	57	95.570	ENSMZEG00005019741	-	94	95.570	Maylandia_zebra
ENSOMEG00000000211	-	64	87.151	ENSMAUG00000014825	Arf5	99	87.151	Mesocricetus_auratus
ENSOMEG00000000211	-	64	87.151	ENSMICG00000000091	ARF5	99	87.151	Microcebus_murinus
ENSOMEG00000000211	-	64	87.151	ENSMOCG00000022861	Arf5	99	87.151	Microtus_ochrogaster
ENSOMEG00000000211	-	64	86.592	ENSMODG00000015229	ARF5	99	86.592	Monodelphis_domestica
ENSOMEG00000000211	-	64	68.715	ENSMALG00000022638	zgc:110286	100	68.715	Monopterus_albus
ENSOMEG00000000211	-	64	90.503	ENSMALG00000010117	-	99	90.503	Monopterus_albus
ENSOMEG00000000211	-	65	96.667	ENSMALG00000006020	-	100	96.667	Monopterus_albus
ENSOMEG00000000211	-	64	87.151	MGP_CAROLIEiJ_G0028156	Arf5	99	87.151	Mus_caroli
ENSOMEG00000000211	-	64	87.151	ENSMUSG00000020440	Arf5	99	87.151	Mus_musculus
ENSOMEG00000000211	-	64	87.151	MGP_PahariEiJ_G0021914	Arf5	99	87.151	Mus_pahari
ENSOMEG00000000211	-	64	87.151	MGP_SPRETEiJ_G0029156	Arf5	99	87.151	Mus_spretus
ENSOMEG00000000211	-	64	87.151	ENSMPUG00000006675	ARF5	99	87.151	Mustela_putorius_furo
ENSOMEG00000000211	-	64	87.151	ENSMLUG00000017122	ARF5	99	87.151	Myotis_lucifugus
ENSOMEG00000000211	-	64	87.151	ENSNGAG00000011743	Arf5	99	87.151	Nannospalax_galili
ENSOMEG00000000211	-	64	91.620	ENSNBRG00000018854	arf5	99	91.620	Neolamprologus_brichardi
ENSOMEG00000000211	-	64	87.151	ENSODEG00000011800	ARF5	99	87.151	Octodon_degus
ENSOMEG00000000211	-	65	96.111	ENSONIG00000014890	-	100	96.111	Oreochromis_niloticus
ENSOMEG00000000211	-	64	91.620	ENSONIG00000007594	arf5	99	91.620	Oreochromis_niloticus
ENSOMEG00000000211	-	64	87.151	ENSOCUG00000024365	ARF5	99	87.151	Oryctolagus_cuniculus
ENSOMEG00000000211	-	65	99.444	ENSORLG00020001755	-	100	99.444	Oryzias_latipes_hni
ENSOMEG00000000211	-	64	87.151	ENSOGAG00000013336	ARF5	99	87.151	Otolemur_garnettii
ENSOMEG00000000211	-	64	87.151	ENSPPAG00000037755	ARF5	99	87.151	Pan_paniscus
ENSOMEG00000000211	-	64	87.151	ENSPPRG00000004674	ARF5	99	87.151	Panthera_pardus
ENSOMEG00000000211	-	64	87.151	ENSPTRG00000019651	ARF5	99	87.151	Pan_troglodytes
ENSOMEG00000000211	-	64	87.151	ENSPANG00000032970	ARF5	99	87.151	Papio_anubis
ENSOMEG00000000211	-	64	87.151	ENSPKIG00000025349	arf4a	99	87.151	Paramormyrops_kingsleyae
ENSOMEG00000000211	-	64	89.385	ENSPKIG00000025381	-	99	89.385	Paramormyrops_kingsleyae
ENSOMEG00000000211	-	65	88.889	ENSPKIG00000013814	-	100	88.889	Paramormyrops_kingsleyae
ENSOMEG00000000211	-	64	87.151	ENSPMGG00000009985	-	99	87.151	Periophthalmus_magnuspinnatus
ENSOMEG00000000211	-	64	87.151	ENSPEMG00000021476	Arf5	99	87.151	Peromyscus_maniculatus_bairdii
ENSOMEG00000000211	-	64	78.771	ENSPMAG00000009600	arf4a	100	78.771	Petromyzon_marinus
ENSOMEG00000000211	-	64	91.620	ENSPFOG00000015817	arf5	99	91.620	Poecilia_formosa
ENSOMEG00000000211	-	65	91.160	ENSPFOG00000017992	-	100	91.160	Poecilia_formosa
ENSOMEG00000000211	-	65	91.667	ENSPLAG00000015630	-	100	91.667	Poecilia_latipinna
ENSOMEG00000000211	-	64	91.620	ENSPLAG00000006742	arf5	99	91.620	Poecilia_latipinna
ENSOMEG00000000211	-	65	91.667	ENSPMEG00000004624	-	100	91.667	Poecilia_mexicana
ENSOMEG00000000211	-	64	91.620	ENSPMEG00000009605	arf5	99	91.620	Poecilia_mexicana
ENSOMEG00000000211	-	64	87.151	ENSPCOG00000027640	ARF5	99	87.151	Propithecus_coquereli
ENSOMEG00000000211	-	64	87.151	ENSPVAG00000013940	ARF5	99	87.151	Pteropus_vampyrus
ENSOMEG00000000211	-	65	96.111	ENSPNYG00000004931	-	100	96.111	Pundamilia_nyererei
ENSOMEG00000000211	-	64	91.620	ENSPNYG00000001663	arf5	99	91.620	Pundamilia_nyererei
ENSOMEG00000000211	-	64	72.067	ENSPNAG00000005054	-	99	72.067	Pygocentrus_nattereri
ENSOMEG00000000211	-	64	68.156	ENSPNAG00000004475	-	99	68.156	Pygocentrus_nattereri
ENSOMEG00000000211	-	64	91.620	ENSPNAG00000024427	-	99	91.620	Pygocentrus_nattereri
ENSOMEG00000000211	-	64	87.709	ENSPNAG00000004745	arf4a	99	87.709	Pygocentrus_nattereri
ENSOMEG00000000211	-	64	87.151	ENSRNOG00000007806	Arf5	99	87.151	Rattus_norvegicus
ENSOMEG00000000211	-	64	87.151	ENSRBIG00000039868	ARF5	99	87.151	Rhinopithecus_bieti
ENSOMEG00000000211	-	64	87.151	ENSRROG00000041157	ARF5	99	87.151	Rhinopithecus_roxellana
ENSOMEG00000000211	-	64	87.151	ENSSBOG00000021669	ARF5	99	87.151	Saimiri_boliviensis_boliviensis
ENSOMEG00000000211	-	64	86.592	ENSSHAG00000015053	ARF5	99	86.592	Sarcophilus_harrisii
ENSOMEG00000000211	-	64	81.006	ENSSFOG00015007701	-	99	81.006	Scleropages_formosus
ENSOMEG00000000211	-	64	89.385	ENSSFOG00015020707	ARF5	99	89.385	Scleropages_formosus
ENSOMEG00000000211	-	65	93.889	ENSSMAG00000004541	-	100	93.889	Scophthalmus_maximus
ENSOMEG00000000211	-	64	89.385	ENSSMAG00000011361	arf5	99	89.385	Scophthalmus_maximus
ENSOMEG00000000211	-	64	90.503	ENSSDUG00000005105	arf5	99	90.503	Seriola_dumerili
ENSOMEG00000000211	-	64	90.503	ENSSLDG00000017188	arf5	99	90.503	Seriola_lalandi_dorsalis
ENSOMEG00000000211	-	64	89.385	ENSSPAG00000014434	arf5	99	89.385	Stegastes_partitus
ENSOMEG00000000211	-	65	96.667	ENSSPAG00000022680	-	100	96.667	Stegastes_partitus
ENSOMEG00000000211	-	64	87.151	ENSSSCG00000016593	ARF5	99	87.151	Sus_scrofa
ENSOMEG00000000211	-	64	86.034	ENSTRUG00000025462	-	100	86.034	Takifugu_rubripes
ENSOMEG00000000211	-	64	89.385	ENSTNIG00000003348	arf5	100	89.385	Tetraodon_nigroviridis
ENSOMEG00000000211	-	64	85.475	ENSTNIG00000017954	-	100	85.475	Tetraodon_nigroviridis
ENSOMEG00000000211	-	58	88.199	ENSTTRG00000006043	ARF5	99	88.199	Tursiops_truncatus
ENSOMEG00000000211	-	64	87.151	ENSUAMG00000012982	ARF5	99	87.151	Ursus_americanus
ENSOMEG00000000211	-	64	87.151	ENSVVUG00000007062	ARF5	99	87.151	Vulpes_vulpes
ENSOMEG00000000211	-	65	91.667	ENSXCOG00000020384	-	100	91.667	Xiphophorus_couchianus
ENSOMEG00000000211	-	65	91.667	ENSXMAG00000004558	-	100	91.667	Xiphophorus_maculatus
ENSOMEG00000000211	-	64	91.620	ENSXMAG00000015306	arf5	99	91.620	Xiphophorus_maculatus