EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000215 (Gene tree)
Gene ID: 112157738
Gene Symbol: zc3hc1 (1 of many)
Alias: -
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3886 bases
Position: chrNVQA01000003.1:9489454-9493339
Accession: 112157738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000007461	zf-C3HC	PF07967.13	1.3e-35	1	1
ENSOMEP00000026641	zf-C3HC	PF07967.13	1.5e-35	1	1
ENSOMEP00000026641	Rsm1	PF08600.10	8.5e-15	1	1
ENSOMEP00000007461	Rsm1	PF08600.10	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000004064	-	2371	XM_024290703	ENSOMEP00000007461	475 (aa)	XP_024146471	UPI000CF834F1
ENSOMET00000004053	-	2434	XM_024290694	ENSOMEP00000026641	496 (aa)	XP_024146462	UPI000CF82C6F

Gene Model

Click here to download ENSOMEG00000000215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000215	zc3hc1	100	98.526	ENSOMEG00000020604	zc3hc1	100	98.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000215	zc3hc1	94	45.010	ENSG00000091732	ZC3HC1	95	45.791	Homo_sapiens
ENSOMEG00000000215	zc3hc1	99	77.510	ENSAPOG00000009078	zc3hc1	99	77.530	Acanthochromis_polyacanthus
ENSOMEG00000000215	zc3hc1	94	44.785	ENSAMEG00000005425	ZC3HC1	95	44.785	Ailuropoda_melanoleuca
ENSOMEG00000000215	zc3hc1	98	74.950	ENSACIG00000019513	zc3hc1	99	74.798	Amphilophus_citrinellus
ENSOMEG00000000215	zc3hc1	99	76.908	ENSAOCG00000024310	zc3hc1	99	76.923	Amphiprion_ocellaris
ENSOMEG00000000215	zc3hc1	99	76.305	ENSAPEG00000004907	zc3hc1	99	76.316	Amphiprion_percula
ENSOMEG00000000215	zc3hc1	85	76.443	ENSATEG00000016898	zc3hc1	90	76.443	Anabas_testudineus
ENSOMEG00000000215	zc3hc1	85	45.843	ENSAPLG00000003832	ZC3HC1	96	45.843	Anas_platyrhynchos
ENSOMEG00000000215	zc3hc1	95	43.699	ENSACAG00000001638	ZC3HC1	95	43.648	Anolis_carolinensis
ENSOMEG00000000215	zc3hc1	95	44.399	ENSANAG00000022213	ZC3HC1	95	44.444	Aotus_nancymaae
ENSOMEG00000000215	zc3hc1	90	77.212	ENSACLG00000025033	zc3hc1	98	77.060	Astatotilapia_calliptera
ENSOMEG00000000215	zc3hc1	94	50.420	ENSAMXG00000036792	zc3hc1	97	51.168	Astyanax_mexicanus
ENSOMEG00000000215	zc3hc1	95	45.102	ENSBTAG00000011247	ZC3HC1	95	44.877	Bos_taurus
ENSOMEG00000000215	zc3hc1	95	44.490	ENSCJAG00000010536	ZC3HC1	95	45.361	Callithrix_jacchus
ENSOMEG00000000215	zc3hc1	95	44.764	ENSCAFG00000028735	-	95	44.813	Canis_familiaris
ENSOMEG00000000215	zc3hc1	95	45.175	ENSCAFG00000031850	-	95	45.228	Canis_familiaris
ENSOMEG00000000215	zc3hc1	95	44.764	ENSCAFG00000029401	-	94	44.813	Canis_familiaris
ENSOMEG00000000215	zc3hc1	95	44.898	ENSCAFG00000001499	-	94	44.948	Canis_familiaris
ENSOMEG00000000215	zc3hc1	95	44.172	ENSCAFG00020023333	-	95	44.215	Canis_lupus_dingo
ENSOMEG00000000215	zc3hc1	95	44.969	ENSCAFG00020006829	-	95	45.021	Canis_lupus_dingo
ENSOMEG00000000215	zc3hc1	95	39.364	ENSCHIG00000014103	ZC3HC1	95	40.084	Capra_hircus
ENSOMEG00000000215	zc3hc1	94	43.299	ENSTSYG00000002843	ZC3HC1	94	45.210	Carlito_syrichta
ENSOMEG00000000215	zc3hc1	87	37.387	ENSCAPG00000016300	ZC3HC1	92	40.426	Cavia_aperea
ENSOMEG00000000215	zc3hc1	96	44.512	ENSCPOG00000014034	ZC3HC1	95	48.930	Cavia_porcellus
ENSOMEG00000000215	zc3hc1	94	33.610	ENSCCAG00000020384	ZC3HC1	98	39.485	Cebus_capucinus
ENSOMEG00000000215	zc3hc1	95	44.758	ENSCATG00000023130	ZC3HC1	95	45.585	Cercocebus_atys
ENSOMEG00000000215	zc3hc1	96	33.615	ENSCLAG00000008260	ZC3HC1	94	32.981	Chinchilla_lanigera
ENSOMEG00000000215	zc3hc1	72	41.995	ENSCSAG00000009881	ZC3HC1	96	42.703	Chlorocebus_sabaeus
ENSOMEG00000000215	zc3hc1	86	46.102	ENSCHOG00000011846	ZC3HC1	95	46.188	Choloepus_hoffmanni
ENSOMEG00000000215	zc3hc1	96	44.603	ENSCPBG00000017519	ZC3HC1	97	44.559	Chrysemys_picta_bellii
ENSOMEG00000000215	zc3hc1	95	44.758	ENSCANG00000029091	ZC3HC1	95	45.585	Colobus_angolensis_palliatus
ENSOMEG00000000215	zc3hc1	94	45.114	ENSCGRG00001018805	Zc3hc1	94	47.024	Cricetulus_griseus_chok1gshd
ENSOMEG00000000215	zc3hc1	94	44.283	ENSCGRG00000017114	Zc3hc1	95	44.283	Cricetulus_griseus_crigri
ENSOMEG00000000215	zc3hc1	98	70.400	ENSCSEG00000009284	zc3hc1	97	70.423	Cynoglossus_semilaevis
ENSOMEG00000000215	zc3hc1	98	69.028	ENSCVAG00000011566	zc3hc1	99	68.839	Cyprinodon_variegatus
ENSOMEG00000000215	zc3hc1	99	60.120	ENSDARG00000062651	zc3hc1	99	60.000	Danio_rerio
ENSOMEG00000000215	zc3hc1	95	44.764	ENSDNOG00000045016	ZC3HC1	95	44.583	Dasypus_novemcinctus
ENSOMEG00000000215	zc3hc1	95	42.620	ENSDORG00000008697	Zc3hc1	94	43.008	Dipodomys_ordii
ENSOMEG00000000215	zc3hc1	87	47.178	ENSEASG00005008789	ZC3HC1	92	47.248	Equus_asinus_asinus
ENSOMEG00000000215	zc3hc1	95	44.969	ENSECAG00000017886	ZC3HC1	95	45.021	Equus_caballus
ENSOMEG00000000215	zc3hc1	81	39.407	ENSEEUG00000003123	ZC3HC1	78	39.407	Erinaceus_europaeus
ENSOMEG00000000215	zc3hc1	99	58.939	ENSELUG00000023168	zc3hc1	99	59.091	Esox_lucius
ENSOMEG00000000215	zc3hc1	95	44.848	ENSFCAG00000010429	ZC3HC1	95	45.738	Felis_catus
ENSOMEG00000000215	zc3hc1	86	46.380	ENSFALG00000005006	ZC3HC1	94	46.453	Ficedula_albicollis
ENSOMEG00000000215	zc3hc1	96	45.325	ENSFDAG00000019897	ZC3HC1	95	47.706	Fukomys_damarensis
ENSOMEG00000000215	zc3hc1	96	71.310	ENSFHEG00000020149	zc3hc1	99	70.876	Fundulus_heteroclitus
ENSOMEG00000000215	zc3hc1	97	64.050	ENSGMOG00000002914	zc3hc1	98	64.108	Gadus_morhua
ENSOMEG00000000215	zc3hc1	93	44.468	ENSGALG00000008003	ZC3HC1	95	44.468	Gallus_gallus
ENSOMEG00000000215	zc3hc1	99	72.323	ENSGAFG00000016095	zc3hc1	99	72.098	Gambusia_affinis
ENSOMEG00000000215	zc3hc1	98	73.642	ENSGACG00000019706	zc3hc1	99	73.834	Gasterosteus_aculeatus
ENSOMEG00000000215	zc3hc1	78	44.776	ENSGAGG00000016106	ZC3HC1	99	44.730	Gopherus_agassizii
ENSOMEG00000000215	zc3hc1	94	45.214	ENSGGOG00000015504	ZC3HC1	95	45.996	Gorilla_gorilla
ENSOMEG00000000215	zc3hc1	98	76.411	ENSHBUG00000008347	zc3hc1	99	76.268	Haplochromis_burtoni
ENSOMEG00000000215	zc3hc1	94	43.943	ENSHGLG00000005085	ZC3HC1	94	48.036	Heterocephalus_glaber_female
ENSOMEG00000000215	zc3hc1	94	44.033	ENSHGLG00100011395	ZC3HC1	94	48.036	Heterocephalus_glaber_male
ENSOMEG00000000215	zc3hc1	99	65.932	ENSHCOG00000014309	zc3hc1	99	65.708	Hippocampus_comes
ENSOMEG00000000215	zc3hc1	95	44.024	ENSSTOG00000023599	-	95	45.135	Ictidomys_tridecemlineatus
ENSOMEG00000000215	zc3hc1	96	75.413	ENSKMAG00000015315	zc3hc1	91	75.260	Kryptolebias_marmoratus
ENSOMEG00000000215	zc3hc1	98	71.000	ENSLBEG00000017325	zc3hc1	99	71.084	Labrus_bergylta
ENSOMEG00000000215	zc3hc1	77	44.552	ENSLACG00000013032	ZC3HC1	95	44.552	Latimeria_chalumnae
ENSOMEG00000000215	zc3hc1	98	52.390	ENSLOCG00000015963	zc3hc1	99	52.104	Lepisosteus_oculatus
ENSOMEG00000000215	zc3hc1	95	45.621	ENSLAFG00000001292	ZC3HC1	95	45.679	Loxodonta_africana
ENSOMEG00000000215	zc3hc1	95	44.758	ENSMFAG00000030176	ZC3HC1	94	47.059	Macaca_fascicularis
ENSOMEG00000000215	zc3hc1	95	43.662	ENSMMUG00000006155	ZC3HC1	97	43.089	Macaca_mulatta
ENSOMEG00000000215	zc3hc1	95	44.758	ENSMNEG00000011833	ZC3HC1	95	45.585	Macaca_nemestrina
ENSOMEG00000000215	zc3hc1	95	44.758	ENSMLEG00000027328	ZC3HC1	95	45.585	Mandrillus_leucophaeus
ENSOMEG00000000215	zc3hc1	98	77.912	ENSMAMG00000010691	zc3hc1	99	77.778	Mastacembelus_armatus
ENSOMEG00000000215	zc3hc1	98	76.613	ENSMZEG00005007142	zc3hc1	99	76.471	Maylandia_zebra
ENSOMEG00000000215	zc3hc1	93	41.478	ENSMGAG00000002977	ZC3HC1	95	43.215	Meleagris_gallopavo
ENSOMEG00000000215	zc3hc1	81	42.651	ENSMAUG00000017032	Zc3hc1	90	43.415	Mesocricetus_auratus
ENSOMEG00000000215	zc3hc1	95	43.725	ENSMICG00000009167	ZC3HC1	94	45.808	Microcebus_murinus
ENSOMEG00000000215	zc3hc1	94	45.946	ENSMOCG00000015239	Zc3hc1	95	45.946	Microtus_ochrogaster
ENSOMEG00000000215	zc3hc1	87	73.636	ENSMMOG00000002204	zc3hc1	99	73.394	Mola_mola
ENSOMEG00000000215	zc3hc1	97	34.221	ENSMODG00000014630	ZC3HC1	96	34.674	Monodelphis_domestica
ENSOMEG00000000215	zc3hc1	97	76.531	ENSMALG00000014447	zc3hc1	99	76.923	Monopterus_albus
ENSOMEG00000000215	zc3hc1	95	44.130	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	43.763	Mus_caroli
ENSOMEG00000000215	zc3hc1	95	44.239	ENSMUSG00000039130	Zc3hc1	95	43.867	Mus_musculus
ENSOMEG00000000215	zc3hc1	94	41.580	MGP_PahariEiJ_G0021941	Zc3hc1	94	42.857	Mus_pahari
ENSOMEG00000000215	zc3hc1	95	44.239	MGP_SPRETEiJ_G0029183	Zc3hc1	95	43.867	Mus_spretus
ENSOMEG00000000215	zc3hc1	90	44.805	ENSMPUG00000005297	ZC3HC1	90	44.805	Mustela_putorius_furo
ENSOMEG00000000215	zc3hc1	95	44.148	ENSMLUG00000000063	-	95	44.398	Myotis_lucifugus
ENSOMEG00000000215	zc3hc1	67	38.810	ENSMLUG00000029228	-	98	40.058	Myotis_lucifugus
ENSOMEG00000000215	zc3hc1	95	45.996	ENSNGAG00000019014	Zc3hc1	94	48.916	Nannospalax_galili
ENSOMEG00000000215	zc3hc1	98	76.162	ENSNBRG00000004577	zc3hc1	99	76.016	Neolamprologus_brichardi
ENSOMEG00000000215	zc3hc1	93	46.170	ENSNLEG00000012698	ZC3HC1	94	46.170	Nomascus_leucogenys
ENSOMEG00000000215	zc3hc1	97	43.434	ENSMEUG00000011023	ZC3HC1	96	43.238	Notamacropus_eugenii
ENSOMEG00000000215	zc3hc1	96	43.522	ENSODEG00000014604	ZC3HC1	95	47.516	Octodon_degus
ENSOMEG00000000215	zc3hc1	98	77.218	ENSONIG00000011644	zc3hc1	99	77.079	Oreochromis_niloticus
ENSOMEG00000000215	zc3hc1	88	41.578	ENSOANG00000011460	ZC3HC1	95	41.595	Ornithorhynchus_anatinus
ENSOMEG00000000215	zc3hc1	95	43.373	ENSOCUG00000017137	ZC3HC1	95	44.376	Oryctolagus_cuniculus
ENSOMEG00000000215	zc3hc1	100	92.615	ENSORLG00000014409	zc3hc1	100	92.615	Oryzias_latipes
ENSOMEG00000000215	zc3hc1	100	93.014	ENSORLG00020015874	zc3hc1	100	93.014	Oryzias_latipes_hni
ENSOMEG00000000215	zc3hc1	100	92.216	ENSORLG00015014641	zc3hc1	100	92.216	Oryzias_latipes_hsok
ENSOMEG00000000215	zc3hc1	95	38.462	ENSOGAG00000026193	ZC3HC1	95	39.630	Otolemur_garnettii
ENSOMEG00000000215	zc3hc1	95	42.353	ENSOARG00000004907	ZC3HC1	94	43.827	Ovis_aries
ENSOMEG00000000215	zc3hc1	94	45.010	ENSPPAG00000043172	ZC3HC1	95	45.791	Pan_paniscus
ENSOMEG00000000215	zc3hc1	94	45.530	ENSPPRG00000001004	ZC3HC1	95	45.530	Panthera_pardus
ENSOMEG00000000215	zc3hc1	95	45.051	ENSPTIG00000007823	ZC3HC1	95	45.946	Panthera_tigris_altaica
ENSOMEG00000000215	zc3hc1	94	45.214	ENSPTRG00000019685	ZC3HC1	98	45.417	Pan_troglodytes
ENSOMEG00000000215	zc3hc1	95	43.863	ENSPANG00000014229	ZC3HC1	95	44.672	Papio_anubis
ENSOMEG00000000215	zc3hc1	98	52.314	ENSPKIG00000007172	zc3hc1	99	52.227	Paramormyrops_kingsleyae
ENSOMEG00000000215	zc3hc1	87	43.516	ENSPSIG00000016646	ZC3HC1	86	43.111	Pelodiscus_sinensis
ENSOMEG00000000215	zc3hc1	98	63.253	ENSPMGG00000003548	zc3hc1	98	63.508	Periophthalmus_magnuspinnatus
ENSOMEG00000000215	zc3hc1	95	41.988	ENSPEMG00000000514	Zc3hc1	95	43.424	Peromyscus_maniculatus_bairdii
ENSOMEG00000000215	zc3hc1	95	42.418	ENSPCIG00000020619	ZC3HC1	99	43.445	Phascolarctos_cinereus
ENSOMEG00000000215	zc3hc1	99	71.515	ENSPFOG00000003466	zc3hc1	99	71.283	Poecilia_formosa
ENSOMEG00000000215	zc3hc1	99	71.919	ENSPLAG00000022211	zc3hc1	99	71.690	Poecilia_latipinna
ENSOMEG00000000215	zc3hc1	99	71.515	ENSPMEG00000001458	zc3hc1	99	71.283	Poecilia_mexicana
ENSOMEG00000000215	zc3hc1	99	71.919	ENSPREG00000004004	zc3hc1	99	71.690	Poecilia_reticulata
ENSOMEG00000000215	zc3hc1	94	42.300	ENSPPYG00000017998	ZC3HC1	95	42.300	Pongo_abelii
ENSOMEG00000000215	zc3hc1	87	46.485	ENSPCAG00000001182	ZC3HC1	93	46.313	Procavia_capensis
ENSOMEG00000000215	zc3hc1	95	43.902	ENSPCOG00000017354	ZC3HC1	94	45.428	Propithecus_coquereli
ENSOMEG00000000215	zc3hc1	93	42.072	ENSPVAG00000003195	ZC3HC1	94	42.316	Pteropus_vampyrus
ENSOMEG00000000215	zc3hc1	98	76.613	ENSPNYG00000020692	zc3hc1	99	76.471	Pundamilia_nyererei
ENSOMEG00000000215	zc3hc1	97	51.546	ENSPNAG00000020746	zc3hc1	100	51.546	Pygocentrus_nattereri
ENSOMEG00000000215	zc3hc1	95	43.326	ENSRNOG00000010154	Zc3hc1	95	43.361	Rattus_norvegicus
ENSOMEG00000000215	zc3hc1	87	46.053	ENSRBIG00000029409	ZC3HC1	94	47.717	Rhinopithecus_bieti
ENSOMEG00000000215	zc3hc1	95	44.556	ENSRROG00000041831	ZC3HC1	95	45.380	Rhinopithecus_roxellana
ENSOMEG00000000215	zc3hc1	74	53.043	ENSSBOG00000032787	ZC3HC1	94	35.950	Saimiri_boliviensis_boliviensis
ENSOMEG00000000215	zc3hc1	87	45.434	ENSSHAG00000002529	ZC3HC1	93	45.495	Sarcophilus_harrisii
ENSOMEG00000000215	zc3hc1	99	53.106	ENSSFOG00015003667	zc3hc1	95	52.929	Scleropages_formosus
ENSOMEG00000000215	zc3hc1	99	75.944	ENSSMAG00000000647	zc3hc1	89	76.721	Scophthalmus_maximus
ENSOMEG00000000215	zc3hc1	99	76.740	ENSSDUG00000004241	zc3hc1	97	77.328	Seriola_dumerili
ENSOMEG00000000215	zc3hc1	99	77.336	ENSSLDG00000025056	zc3hc1	97	77.935	Seriola_lalandi_dorsalis
ENSOMEG00000000215	zc3hc1	95	41.189	ENSSARG00000012013	ZC3HC1	95	41.615	Sorex_araneus
ENSOMEG00000000215	zc3hc1	86	40.515	ENSSPUG00000000778	ZC3HC1	84	41.121	Sphenodon_punctatus
ENSOMEG00000000215	zc3hc1	99	78.313	ENSSPAG00000020041	zc3hc1	99	78.340	Stegastes_partitus
ENSOMEG00000000215	zc3hc1	95	44.694	ENSSSCG00000016565	ZC3HC1	99	45.619	Sus_scrofa
ENSOMEG00000000215	zc3hc1	99	66.599	ENSTRUG00000020077	zc3hc1	99	66.327	Takifugu_rubripes
ENSOMEG00000000215	zc3hc1	99	65.447	ENSTNIG00000007585	zc3hc1	99	66.161	Tetraodon_nigroviridis
ENSOMEG00000000215	zc3hc1	94	37.372	ENSTBEG00000005216	ZC3HC1	95	37.372	Tupaia_belangeri
ENSOMEG00000000215	zc3hc1	94	44.467	ENSTTRG00000008458	ZC3HC1	98	44.720	Tursiops_truncatus
ENSOMEG00000000215	zc3hc1	95	45.030	ENSUAMG00000020249	ZC3HC1	95	45.082	Ursus_americanus
ENSOMEG00000000215	zc3hc1	95	45.233	ENSUMAG00000009268	ZC3HC1	95	45.287	Ursus_maritimus
ENSOMEG00000000215	zc3hc1	63	43.077	ENSVPAG00000010846	ZC3HC1	63	43.849	Vicugna_pacos
ENSOMEG00000000215	zc3hc1	90	45.022	ENSVVUG00000012386	ZC3HC1	95	45.022	Vulpes_vulpes
ENSOMEG00000000215	zc3hc1	90	39.407	ENSXETG00000033900	zc3hc1	95	40.043	Xenopus_tropicalis
ENSOMEG00000000215	zc3hc1	99	70.909	ENSXCOG00000013570	zc3hc1	99	70.672	Xiphophorus_couchianus
ENSOMEG00000000215	zc3hc1	90	72.949	ENSXMAG00000010979	zc3hc1	97	72.707	Xiphophorus_maculatus