EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000286 (Gene tree)
Gene ID: 112138968
Gene Symbol: -
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8032 bases
Position: chrNVQA01002180.1:243434-251465
Accession: 112138968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010572	zf-C2H2	PF00096.26	2.6e-25	1	4
ENSOMEP00000010572	zf-C2H2	PF00096.26	2.6e-25	2	4
ENSOMEP00000010572	zf-C2H2	PF00096.26	2.6e-25	3	4
ENSOMEP00000010572	zf-C2H2	PF00096.26	2.6e-25	4	4
ENSOMEP00000010572	zf-met	PF12874.7	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017417	-	4164	XM_024261650	ENSOMEP00000010572	297 (aa)	XP_024117418	UPI000CF7B60C

Gene Model

Click here to download ENSOMEG00000000286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000286's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000286	-	55	30.539	ENSOMEG00000010300	-	81	30.539
ENSOMEG00000000286	-	62	33.929	ENSOMEG00000016808	-	80	33.929
ENSOMEG00000000286	-	100	59.394	ENSOMEG00000002661	scrt2	99	59.394
ENSOMEG00000000286	-	58	47.368	ENSOMEG00000009071	-	61	47.368
ENSOMEG00000000286	-	99	75.839	ENSOMEG00000003925	scrt1b	99	76.589
ENSOMEG00000000286	-	63	50.267	ENSOMEG00000006591	snai2	73	50.267
ENSOMEG00000000286	-	56	36.765	ENSOMEG00000005143	prdm5	61	36.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000286	-	99	77.258	ENSAPOG00000009279	scrt1b	99	77.258	Acanthochromis_polyacanthus
ENSOMEG00000000286	-	100	86.288	ENSAPOG00000015197	-	100	86.288	Acanthochromis_polyacanthus
ENSOMEG00000000286	-	100	61.386	ENSAPOG00000003680	scrt2	99	61.386	Acanthochromis_polyacanthus
ENSOMEG00000000286	-	100	90.970	ENSACIG00000006586	-	100	90.970	Amphilophus_citrinellus
ENSOMEG00000000286	-	97	55.272	ENSACIG00000001296	-	96	57.516	Amphilophus_citrinellus
ENSOMEG00000000286	-	99	75.168	ENSACIG00000013613	scrt1b	99	75.168	Amphilophus_citrinellus
ENSOMEG00000000286	-	100	60.984	ENSACIG00000012604	scrt2	99	60.984	Amphilophus_citrinellus
ENSOMEG00000000286	-	99	77.258	ENSAOCG00000003910	scrt1b	99	77.258	Amphiprion_ocellaris
ENSOMEG00000000286	-	100	61.386	ENSAOCG00000021557	scrt2	99	61.386	Amphiprion_ocellaris
ENSOMEG00000000286	-	100	91.304	ENSAOCG00000023304	-	100	91.304	Amphiprion_ocellaris
ENSOMEG00000000286	-	99	76.923	ENSAPEG00000000869	scrt1b	99	76.923	Amphiprion_percula
ENSOMEG00000000286	-	100	91.304	ENSAPEG00000005677	-	100	91.304	Amphiprion_percula
ENSOMEG00000000286	-	100	61.386	ENSAPEG00000022558	scrt2	99	61.386	Amphiprion_percula
ENSOMEG00000000286	-	100	59.697	ENSATEG00000023998	scrt2	99	59.697	Anabas_testudineus
ENSOMEG00000000286	-	97	52.853	ENSATEG00000003195	-	97	52.853	Anabas_testudineus
ENSOMEG00000000286	-	99	76.510	ENSATEG00000002302	scrt1b	99	77.592	Anabas_testudineus
ENSOMEG00000000286	-	100	84.281	ENSATEG00000011660	-	100	84.281	Anabas_testudineus
ENSOMEG00000000286	-	69	78.431	ENSACAG00000016109	SCRT2	91	78.431	Anolis_carolinensis
ENSOMEG00000000286	-	100	89.439	ENSACLG00000012046	-	100	89.439	Astatotilapia_calliptera
ENSOMEG00000000286	-	99	76.589	ENSACLG00000007162	scrt1b	99	76.589	Astatotilapia_calliptera
ENSOMEG00000000286	-	99	72.973	ENSAMXG00000042624	SCRT1	100	72.973	Astyanax_mexicanus
ENSOMEG00000000286	-	99	79.798	ENSAMXG00000038085	scrt1a	99	79.798	Astyanax_mexicanus
ENSOMEG00000000286	-	84	67.600	ENSAMXG00000034158	scrt2	87	67.600	Astyanax_mexicanus
ENSOMEG00000000286	-	55	60.736	WBGene00000468	ces-1	61	59.524	Caenorhabditis_elegans
ENSOMEG00000000286	-	87	56.929	ENSCPBG00000027613	SCRT2	100	56.929	Chrysemys_picta_bellii
ENSOMEG00000000286	-	99	76.174	ENSCPBG00000018899	SCRT1	99	76.174	Chrysemys_picta_bellii
ENSOMEG00000000286	-	100	90.970	ENSCSEG00000014892	-	100	90.970	Cynoglossus_semilaevis
ENSOMEG00000000286	-	99	75.251	ENSCSEG00000008596	scrt1b	99	76.589	Cynoglossus_semilaevis
ENSOMEG00000000286	-	100	59.877	ENSCSEG00000021542	scrt2	99	60.494	Cynoglossus_semilaevis
ENSOMEG00000000286	-	100	58.663	ENSCVAG00000021038	scrt2	99	58.663	Cyprinodon_variegatus
ENSOMEG00000000286	-	100	90.970	ENSCVAG00000003190	-	100	90.970	Cyprinodon_variegatus
ENSOMEG00000000286	-	99	76.589	ENSCVAG00000009561	scrt1b	99	76.589	Cyprinodon_variegatus
ENSOMEG00000000286	-	99	76.689	ENSDARG00000040214	scrt1b	99	76.689	Danio_rerio
ENSOMEG00000000286	-	99	79.461	ENSDARG00000100821	scrt1a	99	79.461	Danio_rerio
ENSOMEG00000000286	-	100	77.926	ENSELUG00000022228	scrt1a	100	77.926	Esox_lucius
ENSOMEG00000000286	-	99	78.644	ENSELUG00000005435	scrt1b	98	78.644	Esox_lucius
ENSOMEG00000000286	-	96	61.688	ENSELUG00000023883	scrt2	95	60.952	Esox_lucius
ENSOMEG00000000286	-	67	78.000	ENSFALG00000005718	SCRT2	97	68.000	Ficedula_albicollis
ENSOMEG00000000286	-	99	75.920	ENSFHEG00000014820	scrt1b	99	75.920	Fundulus_heteroclitus
ENSOMEG00000000286	-	100	91.639	ENSFHEG00000009794	-	100	91.639	Fundulus_heteroclitus
ENSOMEG00000000286	-	100	64.000	ENSFHEG00000005732	scrt2	99	64.000	Fundulus_heteroclitus
ENSOMEG00000000286	-	99	75.168	ENSGMOG00000000629	scrt1b	99	75.168	Gadus_morhua
ENSOMEG00000000286	-	56	96.032	ENSGMOG00000013833	-	56	96.032	Gadus_morhua
ENSOMEG00000000286	-	97	55.975	ENSGMOG00000019519	scrt2	96	55.975	Gadus_morhua
ENSOMEG00000000286	-	97	61.806	ENSGALG00000028912	SCRT2	97	62.759	Gallus_gallus
ENSOMEG00000000286	-	100	84.175	ENSGAFG00000009650	-	100	84.175	Gambusia_affinis
ENSOMEG00000000286	-	100	60.883	ENSGAFG00000003093	scrt2	99	60.883	Gambusia_affinis
ENSOMEG00000000286	-	99	75.920	ENSGAFG00000007636	scrt1b	99	75.920	Gambusia_affinis
ENSOMEG00000000286	-	99	74.411	ENSGACG00000008982	scrt1b	99	74.411	Gasterosteus_aculeatus
ENSOMEG00000000286	-	100	86.288	ENSGACG00000004072	-	100	86.288	Gasterosteus_aculeatus
ENSOMEG00000000286	-	99	77.288	ENSGAGG00000011736	SCRT1	99	77.288	Gopherus_agassizii
ENSOMEG00000000286	-	96	60.764	ENSGAGG00000020761	SCRT2	96	61.458	Gopherus_agassizii
ENSOMEG00000000286	-	73	70.642	ENSGAGG00000020760	-	81	71.560	Gopherus_agassizii
ENSOMEG00000000286	-	100	92.308	ENSHBUG00000019101	-	100	92.308	Haplochromis_burtoni
ENSOMEG00000000286	-	97	62.245	ENSHBUG00000012492	scrt2	96	62.245	Haplochromis_burtoni
ENSOMEG00000000286	-	99	76.589	ENSHBUG00000016621	scrt1b	99	76.589	Haplochromis_burtoni
ENSOMEG00000000286	-	97	62.541	ENSHCOG00000008116	scrt2	97	62.541	Hippocampus_comes
ENSOMEG00000000286	-	99	76.589	ENSHCOG00000016704	scrt1b	99	76.589	Hippocampus_comes
ENSOMEG00000000286	-	100	73.115	ENSHCOG00000016179	-	100	73.115	Hippocampus_comes
ENSOMEG00000000286	-	98	78.912	ENSIPUG00000004551	scrt1a	99	78.912	Ictalurus_punctatus
ENSOMEG00000000286	-	99	70.068	ENSIPUG00000005547	-	100	70.068	Ictalurus_punctatus
ENSOMEG00000000286	-	100	60.366	ENSKMAG00000018087	scrt2	99	60.366	Kryptolebias_marmoratus
ENSOMEG00000000286	-	99	75.920	ENSKMAG00000005484	scrt1b	99	75.920	Kryptolebias_marmoratus
ENSOMEG00000000286	-	100	91.973	ENSKMAG00000009489	-	100	91.973	Kryptolebias_marmoratus
ENSOMEG00000000286	-	100	89.899	ENSLBEG00000023388	-	100	89.899	Labrus_bergylta
ENSOMEG00000000286	-	100	59.517	ENSLBEG00000015419	scrt2	99	59.215	Labrus_bergylta
ENSOMEG00000000286	-	99	75.585	ENSLACG00000003588	SCRT1	99	75.585	Latimeria_chalumnae
ENSOMEG00000000286	-	99	78.523	ENSLOCG00000007573	scrt1b	99	78.523	Lepisosteus_oculatus
ENSOMEG00000000286	-	97	54.688	ENSLOCG00000002246	scrt2	97	55.215	Lepisosteus_oculatus
ENSOMEG00000000286	-	60	91.852	ENSMFAG00000035496	SCRT1	92	85.526	Macaca_fascicularis
ENSOMEG00000000286	-	99	75.503	ENSMAMG00000011698	scrt1b	99	76.589	Mastacembelus_armatus
ENSOMEG00000000286	-	100	59.091	ENSMAMG00000001291	scrt2	99	58.788	Mastacembelus_armatus
ENSOMEG00000000286	-	100	92.308	ENSMZEG00005026702	-	100	92.308	Maylandia_zebra
ENSOMEG00000000286	-	99	76.589	ENSMZEG00005005627	scrt1b	99	76.589	Maylandia_zebra
ENSOMEG00000000286	-	97	62.245	ENSMZEG00005026445	scrt2	96	62.245	Maylandia_zebra
ENSOMEG00000000286	-	65	80.829	ENSMGAG00000016579	SCRT2	80	80.829	Meleagris_gallopavo
ENSOMEG00000000286	-	100	59.633	ENSMMOG00000009272	scrt2	99	59.939	Mola_mola
ENSOMEG00000000286	-	99	75.585	ENSMMOG00000003327	scrt1b	99	75.585	Mola_mola
ENSOMEG00000000286	-	100	89.000	ENSMMOG00000018345	-	100	89.000	Mola_mola
ENSOMEG00000000286	-	97	62.887	ENSMALG00000013656	scrt2	96	62.887	Monopterus_albus
ENSOMEG00000000286	-	99	75.839	ENSMALG00000012704	scrt1b	99	76.923	Monopterus_albus
ENSOMEG00000000286	-	50	81.208	ENSNGAG00000020815	Scrt2	75	79.870	Nannospalax_galili
ENSOMEG00000000286	-	100	61.056	ENSNBRG00000007221	scrt2	99	61.056	Neolamprologus_brichardi
ENSOMEG00000000286	-	100	91.973	ENSNBRG00000014882	-	100	91.973	Neolamprologus_brichardi
ENSOMEG00000000286	-	99	74.832	ENSNBRG00000013983	scrt1b	99	74.832	Neolamprologus_brichardi
ENSOMEG00000000286	-	99	75.920	ENSONIG00000006007	scrt1b	99	75.920	Oreochromis_niloticus
ENSOMEG00000000286	-	100	58.967	ENSONIG00000016758	scrt2	99	58.663	Oreochromis_niloticus
ENSOMEG00000000286	-	97	87.541	ENSONIG00000019809	-	100	87.541	Oreochromis_niloticus
ENSOMEG00000000286	-	97	57.785	ENSONIG00000003152	-	96	57.785	Oreochromis_niloticus
ENSOMEG00000000286	-	100	93.688	ENSORLG00000022825	-	100	93.688	Oryzias_latipes
ENSOMEG00000000286	-	97	60.000	ENSORLG00000024051	scrt2	97	60.000	Oryzias_latipes
ENSOMEG00000000286	-	99	75.839	ENSORLG00000025651	scrt1b	99	76.589	Oryzias_latipes
ENSOMEG00000000286	-	99	75.839	ENSORLG00020012967	scrt1b	99	76.589	Oryzias_latipes_hni
ENSOMEG00000000286	-	97	60.000	ENSORLG00020011478	scrt2	97	60.000	Oryzias_latipes_hni
ENSOMEG00000000286	-	99	75.839	ENSORLG00015019165	scrt1b	99	76.589	Oryzias_latipes_hsok
ENSOMEG00000000286	-	97	60.000	ENSORLG00015005524	scrt2	97	60.000	Oryzias_latipes_hsok
ENSOMEG00000000286	-	100	92.691	ENSORLG00015010104	-	100	92.691	Oryzias_latipes_hsok
ENSOMEG00000000286	-	99	77.517	ENSPKIG00000022303	SCRT1	99	77.517	Paramormyrops_kingsleyae
ENSOMEG00000000286	-	99	79.195	ENSPKIG00000020085	scrt1a	99	79.195	Paramormyrops_kingsleyae
ENSOMEG00000000286	-	100	87.625	ENSPMGG00000021402	-	100	87.625	Periophthalmus_magnuspinnatus
ENSOMEG00000000286	-	100	63.366	ENSPMGG00000016561	scrt2	99	63.366	Periophthalmus_magnuspinnatus
ENSOMEG00000000286	-	99	73.490	ENSPMGG00000002260	scrt1b	99	73.490	Periophthalmus_magnuspinnatus
ENSOMEG00000000286	-	100	91.919	ENSPFOG00000005616	-	100	91.919	Poecilia_formosa
ENSOMEG00000000286	-	99	75.920	ENSPFOG00000017719	scrt1b	99	75.920	Poecilia_formosa
ENSOMEG00000000286	-	100	58.967	ENSPFOG00000007738	scrt2	99	58.967	Poecilia_formosa
ENSOMEG00000000286	-	99	75.920	ENSPLAG00000009876	scrt1b	99	75.920	Poecilia_latipinna
ENSOMEG00000000286	-	100	91.919	ENSPLAG00000011718	-	100	91.919	Poecilia_latipinna
ENSOMEG00000000286	-	100	63.036	ENSPLAG00000005765	scrt2	99	63.036	Poecilia_latipinna
ENSOMEG00000000286	-	100	91.919	ENSPMEG00000011706	-	100	91.919	Poecilia_mexicana
ENSOMEG00000000286	-	99	75.920	ENSPMEG00000013274	scrt1b	99	75.920	Poecilia_mexicana
ENSOMEG00000000286	-	100	63.036	ENSPMEG00000001538	scrt2	99	63.036	Poecilia_mexicana
ENSOMEG00000000286	-	100	58.967	ENSPREG00000001147	scrt2	99	58.967	Poecilia_reticulata
ENSOMEG00000000286	-	99	75.920	ENSPREG00000018985	scrt1b	99	75.920	Poecilia_reticulata
ENSOMEG00000000286	-	100	91.919	ENSPREG00000012166	-	100	91.919	Poecilia_reticulata
ENSOMEG00000000286	-	100	91.973	ENSPNYG00000008865	-	100	91.973	Pundamilia_nyererei
ENSOMEG00000000286	-	97	62.245	ENSPNYG00000013109	scrt2	96	62.245	Pundamilia_nyererei
ENSOMEG00000000286	-	99	76.589	ENSPNYG00000017733	scrt1b	99	76.589	Pundamilia_nyererei
ENSOMEG00000000286	-	99	79.125	ENSPNAG00000017415	scrt1a	99	79.125	Pygocentrus_nattereri
ENSOMEG00000000286	-	99	73.064	ENSPNAG00000027880	-	100	73.064	Pygocentrus_nattereri
ENSOMEG00000000286	-	99	77.441	ENSSFOG00015001195	SCRT1	99	77.441	Scleropages_formosus
ENSOMEG00000000286	-	100	76.000	ENSSMAG00000019207	scrt1b	100	76.000	Scophthalmus_maximus
ENSOMEG00000000286	-	100	87.086	ENSSMAG00000005122	-	100	87.086	Scophthalmus_maximus
ENSOMEG00000000286	-	99	76.589	ENSSDUG00000007752	scrt1b	99	76.589	Seriola_dumerili
ENSOMEG00000000286	-	100	92.308	ENSSDUG00000013215	-	100	92.308	Seriola_dumerili
ENSOMEG00000000286	-	98	61.199	ENSSDUG00000001637	scrt2	96	60.568	Seriola_dumerili
ENSOMEG00000000286	-	99	76.589	ENSSLDG00000017166	scrt1b	99	76.589	Seriola_lalandi_dorsalis
ENSOMEG00000000286	-	100	59.394	ENSSLDG00000013565	scrt2	99	58.788	Seriola_lalandi_dorsalis
ENSOMEG00000000286	-	100	92.308	ENSSLDG00000016454	-	100	92.308	Seriola_lalandi_dorsalis
ENSOMEG00000000286	-	97	61.111	ENSSPUG00000018637	SCRT2	97	61.111	Sphenodon_punctatus
ENSOMEG00000000286	-	99	76.589	ENSSPAG00000002200	scrt1b	99	76.589	Stegastes_partitus
ENSOMEG00000000286	-	100	91.639	ENSSPAG00000006788	-	100	91.639	Stegastes_partitus
ENSOMEG00000000286	-	100	61.716	ENSSPAG00000014018	scrt2	99	61.716	Stegastes_partitus
ENSOMEG00000000286	-	67	77.889	ENSTGUG00000006801	SCRT2	99	67.871	Taeniopygia_guttata
ENSOMEG00000000286	-	97	62.701	ENSTRUG00000007620	scrt2	97	62.701	Takifugu_rubripes
ENSOMEG00000000286	-	99	76.174	ENSTRUG00000011637	scrt1b	100	76.174	Takifugu_rubripes
ENSOMEG00000000286	-	100	87.960	ENSTRUG00000012719	-	100	87.960	Takifugu_rubripes
ENSOMEG00000000286	-	87	80.620	ENSTRUG00000019558	-	82	80.620	Takifugu_rubripes
ENSOMEG00000000286	-	100	64.120	ENSTNIG00000012473	scrt2	100	64.120	Tetraodon_nigroviridis
ENSOMEG00000000286	-	99	75.920	ENSTNIG00000018384	scrt1b	99	75.920	Tetraodon_nigroviridis
ENSOMEG00000000286	-	99	75.585	ENSXCOG00000019675	scrt1b	99	75.585	Xiphophorus_couchianus
ENSOMEG00000000286	-	100	83.502	ENSXCOG00000019861	-	100	83.502	Xiphophorus_couchianus
ENSOMEG00000000286	-	100	60.883	ENSXCOG00000014367	scrt2	99	60.883	Xiphophorus_couchianus
ENSOMEG00000000286	-	99	75.585	ENSXMAG00000027885	scrt1b	99	75.585	Xiphophorus_maculatus
ENSOMEG00000000286	-	100	91.582	ENSXMAG00000015353	-	100	91.582	Xiphophorus_maculatus
ENSOMEG00000000286	-	100	58.967	ENSXMAG00000028567	scrt2	99	58.967	Xiphophorus_maculatus