EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000336 (Gene tree)
Gene ID: 112159554
Gene Symbol: RAB29
Alias: -
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4138 bases
Position: chrNVQA01000024.1:29995607-29999744
Accession: 112159554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000012046	MMR_HSR1	PF01926.23	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032557	RAB29-201	1275	-	ENSOMEP00000012046	202 (aa)	XP_024149471	UPI000CF7E8DE

Gene Model

Click here to download ENSOMEG00000000336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000336	RAB29	84	34.706	ENSOMEG00000006333	RAB39B	78	34.706
ENSOMEG00000000336	RAB29	91	35.484	ENSOMEG00000001706	rab23	82	36.318
ENSOMEG00000000336	RAB29	81	36.585	ENSOMEG00000023716	opn1sw2	79	36.585
ENSOMEG00000000336	RAB29	83	33.533	ENSOMEG00000020605	rab18a	79	34.132
ENSOMEG00000000336	RAB29	60	31.148	ENSOMEG00000023857	arl8bb	65	31.148
ENSOMEG00000000336	RAB29	75	38.312	ENSOMEG00000013128	zgc:101559	64	38.312
ENSOMEG00000000336	RAB29	85	34.483	ENSOMEG00000017467	rab11a	78	34.483
ENSOMEG00000000336	RAB29	84	31.818	ENSOMEG00000003647	rab34a	56	31.818
ENSOMEG00000000336	RAB29	77	31.847	ENSOMEG00000017306	rab33a	56	31.847
ENSOMEG00000000336	RAB29	82	33.333	ENSOMEG00000017263	-	79	33.333
ENSOMEG00000000336	RAB29	84	35.088	ENSOMEG00000001613	rab30	81	35.088
ENSOMEG00000000336	RAB29	59	33.058	ENSOMEG00000011161	RAP2B	83	33.333
ENSOMEG00000000336	RAB29	98	33.838	ENSOMEG00000009701	RAB9A	98	33.838
ENSOMEG00000000336	RAB29	86	35.632	ENSOMEG00000022002	rab15	79	35.632
ENSOMEG00000000336	RAB29	87	31.818	ENSOMEG00000017258	RAB41	81	31.818
ENSOMEG00000000336	RAB29	91	30.481	ENSOMEG00000010510	rab25a	84	30.481
ENSOMEG00000000336	RAB29	84	33.136	ENSOMEG00000020594	zgc:171927	77	33.136
ENSOMEG00000000336	RAB29	99	30.516	ENSOMEG00000020271	rab11al	95	30.516
ENSOMEG00000000336	RAB29	88	32.474	ENSOMEG00000003623	rab14	87	32.474
ENSOMEG00000000336	RAB29	85	34.682	ENSOMEG00000020418	rab42a	78	34.682
ENSOMEG00000000336	RAB29	76	35.000	ENSOMEG00000021726	-	64	35.000
ENSOMEG00000000336	RAB29	90	30.808	ENSOMEG00000004379	-	92	30.808
ENSOMEG00000000336	RAB29	82	34.132	ENSOMEG00000023078	rab5c	78	32.787
ENSOMEG00000000336	RAB29	84	34.911	ENSOMEG00000006036	rab1ab	81	34.911
ENSOMEG00000000336	RAB29	99	31.776	ENSOMEG00000002581	rab11ba	95	31.776
ENSOMEG00000000336	RAB29	85	33.333	ENSOMEG00000008327	rab9b	78	33.333
ENSOMEG00000000336	RAB29	89	31.148	ENSOMEG00000023625	rab6bb	91	31.148
ENSOMEG00000000336	RAB29	91	33.871	ENSOMEG00000017958	si:dkey-34d22.5	82	33.871
ENSOMEG00000000336	RAB29	85	33.721	ENSOMEG00000019462	RAB15	80	33.721
ENSOMEG00000000336	RAB29	91	33.000	ENSOMEG00000009074	-	97	33.000
ENSOMEG00000000336	RAB29	84	34.118	ENSOMEG00000017881	-	78	34.118
ENSOMEG00000000336	RAB29	79	37.500	ENSOMEG00000015474	si:dkey-16l2.16	91	34.010
ENSOMEG00000000336	RAB29	98	32.075	ENSOMEG00000017806	-	94	32.075
ENSOMEG00000000336	RAB29	98	32.075	ENSOMEG00000002562	-	94	32.075
ENSOMEG00000000336	RAB29	83	37.278	ENSOMEG00000008191	rab12	68	37.278
ENSOMEG00000000336	RAB29	84	36.095	ENSOMEG00000007546	rab18b	80	36.095
ENSOMEG00000000336	RAB29	99	33.168	ENSOMEG00000018494	-	78	33.168
ENSOMEG00000000336	RAB29	98	30.653	ENSOMEG00000010156	-	96	30.653
ENSOMEG00000000336	RAB29	90	34.615	ENSOMEG00000010692	rab5aa	79	34.615
ENSOMEG00000000336	RAB29	81	31.325	ENSOMEG00000013685	rheb	86	31.325
ENSOMEG00000000336	RAB29	83	34.911	ENSOMEG00000009290	-	76	34.911
ENSOMEG00000000336	RAB29	90	34.872	ENSOMEG00000019819	rab33ba	80	34.872
ENSOMEG00000000336	RAB29	87	38.889	ENSOMEG00000000162	rab9a	89	38.889
ENSOMEG00000000336	RAB29	93	35.638	ENSOMEG00000008210	rab13	88	36.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000336	RAB29	100	73.786	ENSATEG00000024739	RAB29	100	73.786	Anabas_testudineus
ENSOMEG00000000336	RAB29	82	85.455	ENSACLG00000008602	RAB29	100	85.455	Astatotilapia_calliptera
ENSOMEG00000000336	RAB29	100	70.388	ENSCVAG00000014038	RAB29	100	70.388	Cyprinodon_variegatus
ENSOMEG00000000336	RAB29	83	59.281	ENSEBUG00000002259	RAB29	80	59.281	Eptatretus_burgeri
ENSOMEG00000000336	RAB29	89	69.832	ENSFHEG00000015993	RAB29	88	69.832	Fundulus_heteroclitus
ENSOMEG00000000336	RAB29	81	73.780	ENSGMOG00000018475	RAB29	99	73.780	Gadus_morhua
ENSOMEG00000000336	RAB29	100	71.359	ENSGAFG00000000629	RAB29	100	71.359	Gambusia_affinis
ENSOMEG00000000336	RAB29	100	72.549	ENSGACG00000010473	RAB29	99	72.549	Gasterosteus_aculeatus
ENSOMEG00000000336	RAB29	100	77.990	ENSHBUG00000012594	RAB29	100	77.990	Haplochromis_burtoni
ENSOMEG00000000336	RAB29	99	72.637	ENSKMAG00000017150	-	90	72.637	Kryptolebias_marmoratus
ENSOMEG00000000336	RAB29	100	75.122	ENSLBEG00000006152	-	100	75.122	Labrus_bergylta
ENSOMEG00000000336	RAB29	100	75.122	ENSLBEG00000018812	RAB29	100	75.122	Labrus_bergylta
ENSOMEG00000000336	RAB29	99	51.980	ENSLACG00000002523	RAB29	98	51.980	Latimeria_chalumnae
ENSOMEG00000000336	RAB29	100	74.272	ENSMAMG00000006963	RAB29	100	74.272	Mastacembelus_armatus
ENSOMEG00000000336	RAB29	100	77.033	ENSMZEG00005026799	RAB29	100	77.033	Maylandia_zebra
ENSOMEG00000000336	RAB29	100	76.214	ENSMALG00000018436	RAB29	90	76.214	Monopterus_albus
ENSOMEG00000000336	RAB29	80	85.093	ENSNBRG00000008714	RAB29	71	85.093	Neolamprologus_brichardi
ENSOMEG00000000336	RAB29	100	77.512	ENSONIG00000014892	RAB29	100	77.512	Oreochromis_niloticus
ENSOMEG00000000336	RAB29	100	92.647	ENSORLG00000027892	RAB29	100	92.647	Oryzias_latipes
ENSOMEG00000000336	RAB29	100	90.686	ENSORLG00020005240	RAB29	100	90.686	Oryzias_latipes_hni
ENSOMEG00000000336	RAB29	100	91.667	ENSORLG00015020441	-	100	91.667	Oryzias_latipes_hsok
ENSOMEG00000000336	RAB29	87	75.429	ENSPMGG00000008290	-	99	70.098	Periophthalmus_magnuspinnatus
ENSOMEG00000000336	RAB29	100	65.534	ENSPFOG00000013066	RAB29	99	65.534	Poecilia_formosa
ENSOMEG00000000336	RAB29	99	66.502	ENSPLAG00000002600	RAB29	95	66.502	Poecilia_latipinna
ENSOMEG00000000336	RAB29	100	66.019	ENSPMEG00000021807	RAB29	100	66.019	Poecilia_mexicana
ENSOMEG00000000336	RAB29	100	68.932	ENSPREG00000020276	RAB29	100	68.932	Poecilia_reticulata
ENSOMEG00000000336	RAB29	100	77.033	ENSPNYG00000015355	RAB29	100	77.033	Pundamilia_nyererei
ENSOMEG00000000336	RAB29	100	71.359	ENSSDUG00000006543	RAB29	100	71.359	Seriola_dumerili
ENSOMEG00000000336	RAB29	85	56.725	ENSSPUG00000015007	RAB29	84	56.725	Sphenodon_punctatus
ENSOMEG00000000336	RAB29	100	70.388	ENSSPAG00000002062	RAB29	100	70.388	Stegastes_partitus
ENSOMEG00000000336	RAB29	100	70.874	ENSXCOG00000016370	RAB29	100	70.874	Xiphophorus_couchianus
ENSOMEG00000000336	RAB29	100	71.359	ENSXMAG00000029823	RAB29	100	71.359	Xiphophorus_maculatus