EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000357 (Gene tree)
Gene ID: 112145959
Gene Symbol: tnrc6c1
Alias: -
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 12508 bases
Position: chrNVQA01000010.1:10180466-10192973
Accession: 112145959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030174	Ago_hook	PF10427.9	3.8e-06	1	1
ENSOMEP00000030181	Ago_hook	PF10427.9	4.1e-06	1	1
ENSOMEP00000030174	RRM_1	PF00076.22	0.00018	1	1
ENSOMEP00000030181	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000020326	-	5222	-	ENSOMEP00000030174	1690 (aa)	-	-
ENSOMET00000020341	-	5333	-	ENSOMEP00000030181	1727 (aa)	XP_024127247	UPI000CF7E4BD

Gene Model

Click here to download ENSOMEG00000000357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000357	tnrc6c1	60	66.933	ENSOMEG00000017952	tnrc6c2	81	58.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000357	tnrc6c1	99	47.969	ENSG00000078687	TNRC6C	94	54.128	Homo_sapiens
ENSOMEG00000000357	tnrc6c1	100	80.950	ENSAPOG00000019749	tnrc6c1	100	82.387	Acanthochromis_polyacanthus
ENSOMEG00000000357	tnrc6c1	99	47.474	ENSAMEG00000013756	TNRC6C	99	47.311	Ailuropoda_melanoleuca
ENSOMEG00000000357	tnrc6c1	100	71.396	ENSACIG00000008075	tnrc6c1	99	72.361	Amphilophus_citrinellus
ENSOMEG00000000357	tnrc6c1	100	81.416	ENSAOCG00000023968	tnrc6c1	100	82.770	Amphiprion_ocellaris
ENSOMEG00000000357	tnrc6c1	100	81.530	ENSAPEG00000009020	tnrc6c1	100	82.885	Amphiprion_percula
ENSOMEG00000000357	tnrc6c1	99	49.146	ENSACAG00000016198	TNRC6C	92	48.262	Anolis_carolinensis
ENSOMEG00000000357	tnrc6c1	99	48.062	ENSANAG00000021554	TNRC6C	91	50.889	Aotus_nancymaae
ENSOMEG00000000357	tnrc6c1	99	70.512	ENSACLG00000000424	tnrc6c1	99	72.047	Astatotilapia_calliptera
ENSOMEG00000000357	tnrc6c1	91	64.031	ENSBTAG00000018658	TNRC6C	92	50.478	Bos_taurus
ENSOMEG00000000357	tnrc6c1	99	47.907	ENSCJAG00000019431	TNRC6C	91	50.979	Callithrix_jacchus
ENSOMEG00000000357	tnrc6c1	95	57.392	ENSCAFG00000005224	TNRC6C	93	48.048	Canis_familiaris
ENSOMEG00000000357	tnrc6c1	99	46.984	ENSCAFG00020006661	TNRC6C	100	46.975	Canis_lupus_dingo
ENSOMEG00000000357	tnrc6c1	84	63.991	ENSCHIG00000026004	TNRC6C	89	63.728	Capra_hircus
ENSOMEG00000000357	tnrc6c1	94	49.810	ENSTSYG00000005403	TNRC6C	92	50.779	Carlito_syrichta
ENSOMEG00000000357	tnrc6c1	99	44.902	ENSCAPG00000007307	TNRC6C	93	44.415	Cavia_aperea
ENSOMEG00000000357	tnrc6c1	99	48.013	ENSCPOG00000000467	TNRC6C	99	47.944	Cavia_porcellus
ENSOMEG00000000357	tnrc6c1	99	48.852	ENSCCAG00000030524	TNRC6C	92	50.868	Cebus_capucinus
ENSOMEG00000000357	tnrc6c1	99	48.173	ENSCATG00000033135	TNRC6C	92	51.050	Cercocebus_atys
ENSOMEG00000000357	tnrc6c1	99	49.047	ENSCLAG00000011139	TNRC6C	93	48.778	Chinchilla_lanigera
ENSOMEG00000000357	tnrc6c1	99	48.477	ENSCSAG00000005167	TNRC6C	93	48.369	Chlorocebus_sabaeus
ENSOMEG00000000357	tnrc6c1	60	63.101	ENSCHOG00000000088	TNRC6C	63	62.597	Choloepus_hoffmanni
ENSOMEG00000000357	tnrc6c1	99	48.834	ENSCPBG00000027960	TNRC6C	100	48.289	Chrysemys_picta_bellii
ENSOMEG00000000357	tnrc6c1	99	48.121	ENSCANG00000041771	TNRC6C	92	51.050	Colobus_angolensis_palliatus
ENSOMEG00000000357	tnrc6c1	99	48.029	ENSCGRG00001022686	Tnrc6c	93	47.700	Cricetulus_griseus_chok1gshd
ENSOMEG00000000357	tnrc6c1	99	48.392	ENSCGRG00000018041	Tnrc6c	93	47.934	Cricetulus_griseus_crigri
ENSOMEG00000000357	tnrc6c1	99	74.457	ENSCSEG00000012744	tnrc6c1	95	74.383	Cynoglossus_semilaevis
ENSOMEG00000000357	tnrc6c1	93	74.405	ENSDARG00000076847	tnrc6c1	94	61.294	Danio_rerio
ENSOMEG00000000357	tnrc6c1	99	49.151	ENSDNOG00000003247	TNRC6C	95	48.667	Dasypus_novemcinctus
ENSOMEG00000000357	tnrc6c1	99	45.603	ENSDORG00000004558	Tnrc6c	94	45.200	Dipodomys_ordii
ENSOMEG00000000357	tnrc6c1	86	54.288	ENSETEG00000005527	TNRC6C	59	56.960	Echinops_telfairi
ENSOMEG00000000357	tnrc6c1	94	48.837	ENSEASG00005004799	TNRC6C	91	50.613	Equus_asinus_asinus
ENSOMEG00000000357	tnrc6c1	99	47.886	ENSECAG00000012486	TNRC6C	93	48.091	Equus_caballus
ENSOMEG00000000357	tnrc6c1	92	55.368	ENSEEUG00000010008	TNRC6C	92	55.311	Erinaceus_europaeus
ENSOMEG00000000357	tnrc6c1	99	44.324	ENSFCAG00000028358	TNRC6C	91	49.847	Felis_catus
ENSOMEG00000000357	tnrc6c1	94	48.540	ENSFALG00000000848	TNRC6C	92	49.795	Ficedula_albicollis
ENSOMEG00000000357	tnrc6c1	97	49.109	ENSFDAG00000010368	TNRC6C	99	48.455	Fukomys_damarensis
ENSOMEG00000000357	tnrc6c1	100	79.014	ENSFHEG00000002936	tnrc6c1	100	78.784	Fundulus_heteroclitus
ENSOMEG00000000357	tnrc6c1	100	48.866	ENSGALG00000001725	TNRC6C	100	48.372	Gallus_gallus
ENSOMEG00000000357	tnrc6c1	100	80.704	ENSGAFG00000019019	tnrc6c1	100	81.083	Gambusia_affinis
ENSOMEG00000000357	tnrc6c1	99	70.153	ENSGACG00000012320	tnrc6c1	92	70.926	Gasterosteus_aculeatus
ENSOMEG00000000357	tnrc6c1	99	50.299	ENSGAGG00000022043	TNRC6C	100	49.243	Gopherus_agassizii
ENSOMEG00000000357	tnrc6c1	99	47.969	ENSGGOG00000011304	TNRC6C	92	50.718	Gorilla_gorilla
ENSOMEG00000000357	tnrc6c1	100	78.332	ENSHBUG00000010846	tnrc6c1	100	78.152	Haplochromis_burtoni
ENSOMEG00000000357	tnrc6c1	99	48.780	ENSHGLG00000004809	TNRC6C	93	47.766	Heterocephalus_glaber_female
ENSOMEG00000000357	tnrc6c1	99	48.097	ENSHGLG00100012597	TNRC6C	93	47.349	Heterocephalus_glaber_male
ENSOMEG00000000357	tnrc6c1	99	60.432	ENSIPUG00000000818	tnrc6c1	94	60.328	Ictalurus_punctatus
ENSOMEG00000000357	tnrc6c1	99	48.336	ENSSTOG00000009101	TNRC6C	99	48.350	Ictidomys_tridecemlineatus
ENSOMEG00000000357	tnrc6c1	99	47.838	ENSJJAG00000017055	Tnrc6c	93	47.218	Jaculus_jaculus
ENSOMEG00000000357	tnrc6c1	98	75.015	ENSKMAG00000021023	tnrc6c1	100	73.932	Kryptolebias_marmoratus
ENSOMEG00000000357	tnrc6c1	90	63.402	ENSLACG00000015283	TNRC6C	95	61.856	Latimeria_chalumnae
ENSOMEG00000000357	tnrc6c1	99	79.032	ENSLOCG00000013377	tnrc6c1	89	79.179	Lepisosteus_oculatus
ENSOMEG00000000357	tnrc6c1	99	47.762	ENSLAFG00000011122	TNRC6C	99	47.808	Loxodonta_africana
ENSOMEG00000000357	tnrc6c1	99	48.173	ENSMFAG00000043943	TNRC6C	92	51.050	Macaca_fascicularis
ENSOMEG00000000357	tnrc6c1	99	48.529	ENSMMUG00000011924	TNRC6C	91	51.044	Macaca_mulatta
ENSOMEG00000000357	tnrc6c1	99	48.121	ENSMNEG00000030405	TNRC6C	91	50.983	Macaca_nemestrina
ENSOMEG00000000357	tnrc6c1	99	48.173	ENSMLEG00000033436	TNRC6C	92	51.050	Mandrillus_leucophaeus
ENSOMEG00000000357	tnrc6c1	100	78.617	ENSMAMG00000023613	tnrc6c1	100	78.895	Mastacembelus_armatus
ENSOMEG00000000357	tnrc6c1	100	78.654	ENSMZEG00005010920	tnrc6c1	100	78.238	Maylandia_zebra
ENSOMEG00000000357	tnrc6c1	93	65.000	ENSMGAG00000003906	TNRC6C	87	65.000	Meleagris_gallopavo
ENSOMEG00000000357	tnrc6c1	94	48.707	ENSMAUG00000021618	Tnrc6c	91	49.482	Mesocricetus_auratus
ENSOMEG00000000357	tnrc6c1	99	47.656	ENSMICG00000003952	TNRC6C	92	50.571	Microcebus_murinus
ENSOMEG00000000357	tnrc6c1	99	47.895	ENSMOCG00000015879	Tnrc6c	99	48.272	Microtus_ochrogaster
ENSOMEG00000000357	tnrc6c1	94	76.340	ENSMMOG00000005203	tnrc6c1	100	76.314	Mola_mola
ENSOMEG00000000357	tnrc6c1	100	47.649	ENSMODG00000001785	TNRC6C	93	47.197	Monodelphis_domestica
ENSOMEG00000000357	tnrc6c1	99	47.657	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	47.916	Mus_caroli
ENSOMEG00000000357	tnrc6c1	99	47.865	ENSMUSG00000025571	Tnrc6c	99	48.004	Mus_musculus
ENSOMEG00000000357	tnrc6c1	99	47.709	MGP_PahariEiJ_G0018593	Tnrc6c	99	47.953	Mus_pahari
ENSOMEG00000000357	tnrc6c1	99	47.760	MGP_SPRETEiJ_G0018309	Tnrc6c	99	47.896	Mus_spretus
ENSOMEG00000000357	tnrc6c1	99	47.252	ENSMPUG00000013348	TNRC6C	92	46.995	Mustela_putorius_furo
ENSOMEG00000000357	tnrc6c1	99	45.889	ENSMLUG00000014431	TNRC6C	92	46.321	Myotis_lucifugus
ENSOMEG00000000357	tnrc6c1	99	47.764	ENSNGAG00000012203	Tnrc6c	93	47.124	Nannospalax_galili
ENSOMEG00000000357	tnrc6c1	100	78.613	ENSNBRG00000005344	tnrc6c1	100	78.601	Neolamprologus_brichardi
ENSOMEG00000000357	tnrc6c1	99	46.670	ENSNLEG00000000047	TNRC6C	93	46.290	Nomascus_leucogenys
ENSOMEG00000000357	tnrc6c1	93	54.281	ENSMEUG00000005104	TNRC6C	96	65.271	Notamacropus_eugenii
ENSOMEG00000000357	tnrc6c1	94	49.668	ENSODEG00000012499	TNRC6C	91	51.008	Octodon_degus
ENSOMEG00000000357	tnrc6c1	94	79.250	ENSONIG00000002210	tnrc6c1	100	78.938	Oreochromis_niloticus
ENSOMEG00000000357	tnrc6c1	73	47.325	ENSOANG00000009758	-	55	56.518	Ornithorhynchus_anatinus
ENSOMEG00000000357	tnrc6c1	100	93.022	ENSORLG00000009837	tnrc6c1	100	93.081	Oryzias_latipes
ENSOMEG00000000357	tnrc6c1	100	93.229	ENSORLG00020016510	tnrc6c1	100	93.374	Oryzias_latipes_hni
ENSOMEG00000000357	tnrc6c1	80	92.793	ENSORLG00015000171	tnrc6c1	99	93.165	Oryzias_latipes_hsok
ENSOMEG00000000357	tnrc6c1	94	47.769	ENSOGAG00000007197	TNRC6C	92	49.610	Otolemur_garnettii
ENSOMEG00000000357	tnrc6c1	95	46.281	ENSOARG00000006041	TNRC6C	92	46.681	Ovis_aries
ENSOMEG00000000357	tnrc6c1	99	47.969	ENSPPAG00000027160	TNRC6C	92	50.629	Pan_paniscus
ENSOMEG00000000357	tnrc6c1	99	44.140	ENSPPRG00000018881	TNRC6C	91	49.847	Panthera_pardus
ENSOMEG00000000357	tnrc6c1	99	48.021	ENSPTRG00000009699	TNRC6C	92	50.689	Pan_troglodytes
ENSOMEG00000000357	tnrc6c1	99	48.173	ENSPANG00000019994	TNRC6C	91	51.106	Papio_anubis
ENSOMEG00000000357	tnrc6c1	94	54.954	ENSPKIG00000005428	tnrc6c1	100	55.174	Paramormyrops_kingsleyae
ENSOMEG00000000357	tnrc6c1	97	49.080	ENSPSIG00000018069	TNRC6C	99	48.186	Pelodiscus_sinensis
ENSOMEG00000000357	tnrc6c1	93	71.908	ENSPMGG00000022911	tnrc6c1	98	75.600	Periophthalmus_magnuspinnatus
ENSOMEG00000000357	tnrc6c1	99	48.181	ENSPEMG00000009785	Tnrc6c	93	47.672	Peromyscus_maniculatus_bairdii
ENSOMEG00000000357	tnrc6c1	51	38.492	ENSPCIG00000017421	-	85	39.071	Phascolarctos_cinereus
ENSOMEG00000000357	tnrc6c1	99	80.621	ENSPFOG00000012560	tnrc6c1	99	75.971	Poecilia_formosa
ENSOMEG00000000357	tnrc6c1	94	81.044	ENSPLAG00000021055	tnrc6c1	100	80.982	Poecilia_latipinna
ENSOMEG00000000357	tnrc6c1	99	48.502	ENSPPYG00000008679	TNRC6C	92	48.463	Pongo_abelii
ENSOMEG00000000357	tnrc6c1	86	65.479	ENSPCAG00000012510	TNRC6C	78	65.702	Procavia_capensis
ENSOMEG00000000357	tnrc6c1	94	49.556	ENSPCOG00000021451	TNRC6C	92	50.540	Propithecus_coquereli
ENSOMEG00000000357	tnrc6c1	70	61.194	ENSPVAG00000002008	TNRC6C	95	60.150	Pteropus_vampyrus
ENSOMEG00000000357	tnrc6c1	100	78.711	ENSPNYG00000014477	tnrc6c1	100	78.567	Pundamilia_nyererei
ENSOMEG00000000357	tnrc6c1	91	48.686	ENSRNOG00000022395	Tnrc6c	91	49.541	Rattus_norvegicus
ENSOMEG00000000357	tnrc6c1	99	48.292	ENSRBIG00000027777	TNRC6C	92	51.050	Rhinopithecus_bieti
ENSOMEG00000000357	tnrc6c1	99	48.292	ENSRROG00000042912	TNRC6C	92	51.050	Rhinopithecus_roxellana
ENSOMEG00000000357	tnrc6c1	99	48.137	ENSSBOG00000023981	TNRC6C	92	50.780	Saimiri_boliviensis_boliviensis
ENSOMEG00000000357	tnrc6c1	51	63.589	ENSSHAG00000018330	-	99	62.749	Sarcophilus_harrisii
ENSOMEG00000000357	tnrc6c1	99	57.842	ENSSFOG00015006475	tnrc6c1	96	57.510	Scleropages_formosus
ENSOMEG00000000357	tnrc6c1	94	62.500	ENSSFOG00015004735	-	99	65.063	Scleropages_formosus
ENSOMEG00000000357	tnrc6c1	100	77.999	ENSSMAG00000012761	tnrc6c1	100	78.150	Scophthalmus_maximus
ENSOMEG00000000357	tnrc6c1	99	81.272	ENSSDUG00000002366	tnrc6c1	98	81.095	Seriola_dumerili
ENSOMEG00000000357	tnrc6c1	94	81.157	ENSSLDG00000025613	tnrc6c1	100	80.970	Seriola_lalandi_dorsalis
ENSOMEG00000000357	tnrc6c1	66	61.728	ENSSARG00000006816	TNRC6C	91	61.728	Sorex_araneus
ENSOMEG00000000357	tnrc6c1	79	53.069	ENSSPUG00000007341	TNRC6C	88	52.699	Sphenodon_punctatus
ENSOMEG00000000357	tnrc6c1	98	81.775	ENSSPAG00000014977	tnrc6c1	98	82.183	Stegastes_partitus
ENSOMEG00000000357	tnrc6c1	94	50.858	ENSSSCG00000034373	TNRC6C	92	49.670	Sus_scrofa
ENSOMEG00000000357	tnrc6c1	97	49.461	ENSTGUG00000007733	TNRC6C	99	48.838	Taeniopygia_guttata
ENSOMEG00000000357	tnrc6c1	99	72.701	ENSTRUG00000011685	tnrc6c1	99	73.780	Takifugu_rubripes
ENSOMEG00000000357	tnrc6c1	99	68.041	ENSTNIG00000005273	tnrc6c1	100	75.313	Tetraodon_nigroviridis
ENSOMEG00000000357	tnrc6c1	65	49.664	ENSTBEG00000005046	TNRC6C	100	48.964	Tupaia_belangeri
ENSOMEG00000000357	tnrc6c1	97	48.841	ENSTTRG00000010828	TNRC6C	99	48.725	Tursiops_truncatus
ENSOMEG00000000357	tnrc6c1	99	46.840	ENSUMAG00000013614	TNRC6C	93	46.945	Ursus_maritimus
ENSOMEG00000000357	tnrc6c1	92	51.155	ENSVVUG00000015268	TNRC6C	100	50.364	Vulpes_vulpes
ENSOMEG00000000357	tnrc6c1	94	49.249	ENSXETG00000019470	tnrc6c	99	48.708	Xenopus_tropicalis
ENSOMEG00000000357	tnrc6c1	100	80.469	ENSXMAG00000025971	tnrc6c1	100	81.021	Xiphophorus_maculatus