EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000359 (Gene tree)
Gene ID: 112136944
Gene Symbol: si:ch73-63e15.2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 84764 bases
Position: chrNVQA01000035.1:1934648-2019411
Accession: 112136944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000030217	ResIII	PF04851.15	3.1e-07	1	1
ENSOMEP00000012952	ResIII	PF04851.15	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000032947	-	8530	-	ENSOMEP00000030260	1587 (aa)	-	-
ENSOMET00000020434	-	8467	XM_024258995	ENSOMEP00000012952	1566 (aa)	XP_024114763	UPI000CF83114
ENSOMET00000032920	-	8383	-	ENSOMEP00000030217	1538 (aa)	-	-
ENSOMET00000032893	-	8157	-	ENSOMEP00000030244	1504 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000000359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000359	si:ch73-63e15.2	62	64.399	ENSOMEG00000019313	sbno1	68	64.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000359	si:ch73-63e15.2	79	63.737	ENSG00000064932	SBNO2	88	67.698	Homo_sapiens
ENSOMEG00000000359	si:ch73-63e15.2	100	79.319	ENSAPOG00000003185	si:ch73-63e15.2	100	79.924	Acanthochromis_polyacanthus
ENSOMEG00000000359	si:ch73-63e15.2	100	79.987	ENSAOCG00000016581	si:ch73-63e15.2	98	82.860	Amphiprion_ocellaris
ENSOMEG00000000359	si:ch73-63e15.2	100	79.987	ENSAPEG00000008862	si:ch73-63e15.2	100	80.469	Amphiprion_percula
ENSOMEG00000000359	si:ch73-63e15.2	91	80.962	ENSATEG00000023838	si:ch73-63e15.2	99	84.000	Anabas_testudineus
ENSOMEG00000000359	si:ch73-63e15.2	73	71.734	ENSAPLG00000007158	SBNO2	90	71.477	Anas_platyrhynchos
ENSOMEG00000000359	si:ch73-63e15.2	73	66.724	ENSANAG00000026685	SBNO2	89	66.810	Aotus_nancymaae
ENSOMEG00000000359	si:ch73-63e15.2	100	76.879	ENSACLG00000005090	si:ch73-63e15.2	100	77.278	Astatotilapia_calliptera
ENSOMEG00000000359	si:ch73-63e15.2	79	77.724	ENSAMXG00000015881	si:ch73-63e15.2	82	80.911	Astyanax_mexicanus
ENSOMEG00000000359	si:ch73-63e15.2	80	76.282	ENSAMXG00000018868	sbno2a	99	74.412	Astyanax_mexicanus
ENSOMEG00000000359	si:ch73-63e15.2	79	64.511	ENSBTAG00000020780	SBNO2	89	67.064	Bos_taurus
ENSOMEG00000000359	si:ch73-63e15.2	79	64.603	ENSCAFG00000019543	SBNO2	90	64.217	Canis_familiaris
ENSOMEG00000000359	si:ch73-63e15.2	79	64.603	ENSCAFG00020017115	SBNO2	96	64.217	Canis_lupus_dingo
ENSOMEG00000000359	si:ch73-63e15.2	79	64.353	ENSCHIG00000026127	SBNO2	90	64.178	Capra_hircus
ENSOMEG00000000359	si:ch73-63e15.2	73	66.667	ENSCAPG00000005731	SBNO2	94	66.580	Cavia_aperea
ENSOMEG00000000359	si:ch73-63e15.2	73	66.810	ENSCPOG00000007477	SBNO2	87	66.467	Cavia_porcellus
ENSOMEG00000000359	si:ch73-63e15.2	79	63.384	ENSCCAG00000037518	SBNO2	89	67.041	Cebus_capucinus
ENSOMEG00000000359	si:ch73-63e15.2	79	63.845	ENSCATG00000037046	SBNO2	88	67.526	Cercocebus_atys
ENSOMEG00000000359	si:ch73-63e15.2	73	67.965	ENSCLAG00000010178	SBNO2	98	68.449	Chinchilla_lanigera
ENSOMEG00000000359	si:ch73-63e15.2	79	63.845	ENSCSAG00000012317	SBNO2	90	63.845	Chlorocebus_sabaeus
ENSOMEG00000000359	si:ch73-63e15.2	75	69.070	ENSCPBG00000008920	SBNO2	82	82.213	Chrysemys_picta_bellii
ENSOMEG00000000359	si:ch73-63e15.2	75	63.749	ENSCANG00000036745	SBNO2	95	67.687	Colobus_angolensis_palliatus
ENSOMEG00000000359	si:ch73-63e15.2	73	65.722	ENSCGRG00001023960	Sbno2	85	65.751	Cricetulus_griseus_chok1gshd
ENSOMEG00000000359	si:ch73-63e15.2	73	67.296	ENSCGRG00000011984	Sbno2	86	67.324	Cricetulus_griseus_crigri
ENSOMEG00000000359	si:ch73-63e15.2	75	81.454	ENSCSEG00000006856	si:ch73-63e15.2	98	83.690	Cynoglossus_semilaevis
ENSOMEG00000000359	si:ch73-63e15.2	100	75.579	ENSCVAG00000005663	si:ch73-63e15.2	89	79.466	Cyprinodon_variegatus
ENSOMEG00000000359	si:ch73-63e15.2	82	73.926	ENSDARG00000098801	sbno2a	94	74.387	Danio_rerio
ENSOMEG00000000359	si:ch73-63e15.2	99	65.524	ENSDARG00000016188	SBNO2	98	68.000	Danio_rerio
ENSOMEG00000000359	si:ch73-63e15.2	74	67.772	ENSDORG00000002916	Sbno2	86	68.054	Dipodomys_ordii
ENSOMEG00000000359	si:ch73-63e15.2	79	64.291	ENSEASG00005021621	SBNO2	88	68.028	Equus_asinus_asinus
ENSOMEG00000000359	si:ch73-63e15.2	79	64.371	ENSECAG00000011827	SBNO2	88	68.115	Equus_caballus
ENSOMEG00000000359	si:ch73-63e15.2	99	71.215	ENSELUG00000020457	si:ch73-63e15.2	90	76.593	Esox_lucius
ENSOMEG00000000359	si:ch73-63e15.2	79	67.059	ENSFALG00000013988	SBNO2	89	68.196	Ficedula_albicollis
ENSOMEG00000000359	si:ch73-63e15.2	71	66.078	ENSFDAG00000015186	SBNO2	87	65.647	Fukomys_damarensis
ENSOMEG00000000359	si:ch73-63e15.2	100	75.000	ENSFHEG00000022262	si:ch73-63e15.2	88	80.832	Fundulus_heteroclitus
ENSOMEG00000000359	si:ch73-63e15.2	73	85.302	ENSGMOG00000007542	si:ch73-63e15.2	95	85.302	Gadus_morhua
ENSOMEG00000000359	si:ch73-63e15.2	81	66.921	ENSGALG00000037522	SBNO2	88	69.013	Gallus_gallus
ENSOMEG00000000359	si:ch73-63e15.2	80	86.698	ENSGAFG00000004860	si:ch73-63e15.2	93	87.126	Gambusia_affinis
ENSOMEG00000000359	si:ch73-63e15.2	73	87.295	ENSGACG00000013190	si:ch73-63e15.2	96	86.593	Gasterosteus_aculeatus
ENSOMEG00000000359	si:ch73-63e15.2	80	68.376	ENSGAGG00000008348	SBNO2	88	70.768	Gopherus_agassizii
ENSOMEG00000000359	si:ch73-63e15.2	100	76.627	ENSHBUG00000010742	si:ch73-63e15.2	100	77.632	Haplochromis_burtoni
ENSOMEG00000000359	si:ch73-63e15.2	73	67.869	ENSHGLG00000008739	SBNO2	91	64.229	Heterocephalus_glaber_female
ENSOMEG00000000359	si:ch73-63e15.2	73	67.609	ENSHGLG00100005269	SBNO2	98	68.139	Heterocephalus_glaber_male
ENSOMEG00000000359	si:ch73-63e15.2	84	77.887	ENSHCOG00000000884	si:ch73-63e15.2	99	77.660	Hippocampus_comes
ENSOMEG00000000359	si:ch73-63e15.2	79	77.860	ENSIPUG00000000537	si:ch73-63e15.2	85	79.452	Ictalurus_punctatus
ENSOMEG00000000359	si:ch73-63e15.2	79	78.194	ENSIPUG00000019672	sbno2	99	75.912	Ictalurus_punctatus
ENSOMEG00000000359	si:ch73-63e15.2	73	67.842	ENSSTOG00000025832	SBNO2	90	64.959	Ictidomys_tridecemlineatus
ENSOMEG00000000359	si:ch73-63e15.2	73	64.872	ENSJJAG00000017397	Sbno2	85	65.169	Jaculus_jaculus
ENSOMEG00000000359	si:ch73-63e15.2	100	77.650	ENSKMAG00000005541	si:ch73-63e15.2	100	78.152	Kryptolebias_marmoratus
ENSOMEG00000000359	si:ch73-63e15.2	93	77.424	ENSLBEG00000025016	si:ch73-63e15.2	95	89.689	Labrus_bergylta
ENSOMEG00000000359	si:ch73-63e15.2	79	80.815	ENSLOCG00000004643	si:ch73-63e15.2	84	84.528	Lepisosteus_oculatus
ENSOMEG00000000359	si:ch73-63e15.2	72	65.191	ENSLAFG00000008824	SBNO2	90	65.066	Loxodonta_africana
ENSOMEG00000000359	si:ch73-63e15.2	79	62.609	ENSMFAG00000040030	SBNO2	91	65.185	Macaca_fascicularis
ENSOMEG00000000359	si:ch73-63e15.2	79	63.845	ENSMMUG00000010886	SBNO2	88	66.380	Macaca_mulatta
ENSOMEG00000000359	si:ch73-63e15.2	79	63.924	ENSMNEG00000039927	SBNO2	88	67.612	Macaca_nemestrina
ENSOMEG00000000359	si:ch73-63e15.2	73	64.274	ENSMLEG00000038556	SBNO2	98	64.530	Mandrillus_leucophaeus
ENSOMEG00000000359	si:ch73-63e15.2	100	76.438	ENSMAMG00000018758	si:ch73-63e15.2	100	76.456	Mastacembelus_armatus
ENSOMEG00000000359	si:ch73-63e15.2	100	77.258	ENSMZEG00005010682	si:ch73-63e15.2	100	77.215	Maylandia_zebra
ENSOMEG00000000359	si:ch73-63e15.2	75	69.810	ENSMGAG00000003801	SBNO2	92	69.447	Meleagris_gallopavo
ENSOMEG00000000359	si:ch73-63e15.2	73	67.096	ENSMAUG00000008034	Sbno2	85	67.530	Mesocricetus_auratus
ENSOMEG00000000359	si:ch73-63e15.2	79	63.918	ENSMICG00000013071	SBNO2	88	67.736	Microcebus_murinus
ENSOMEG00000000359	si:ch73-63e15.2	73	67.178	ENSMOCG00000010504	Sbno2	86	67.438	Microtus_ochrogaster
ENSOMEG00000000359	si:ch73-63e15.2	79	66.431	ENSMODG00000005382	SBNO2	87	67.233	Monodelphis_domestica
ENSOMEG00000000359	si:ch73-63e15.2	60	84.004	ENSMALG00000021831	si:ch73-63e15.2	96	84.004	Monopterus_albus
ENSOMEG00000000359	si:ch73-63e15.2	73	66.781	ENSMUSG00000035673	Sbno2	93	67.040	Mus_musculus
ENSOMEG00000000359	si:ch73-63e15.2	73	66.954	MGP_PahariEiJ_G0030976	Sbno2	85	67.212	Mus_pahari
ENSOMEG00000000359	si:ch73-63e15.2	73	67.040	MGP_SPRETEiJ_G0016381	Sbno2	91	67.298	Mus_spretus
ENSOMEG00000000359	si:ch73-63e15.2	63	70.289	ENSMPUG00000008747	SBNO2	91	70.020	Mustela_putorius_furo
ENSOMEG00000000359	si:ch73-63e15.2	73	66.894	ENSNGAG00000004308	Sbno2	86	67.013	Nannospalax_galili
ENSOMEG00000000359	si:ch73-63e15.2	78	88.054	ENSNBRG00000022968	si:ch73-63e15.2	99	89.595	Neolamprologus_brichardi
ENSOMEG00000000359	si:ch73-63e15.2	74	68.618	ENSNLEG00000001305	SBNO2	90	68.618	Nomascus_leucogenys
ENSOMEG00000000359	si:ch73-63e15.2	61	67.053	ENSMEUG00000013511	-	78	66.737	Notamacropus_eugenii
ENSOMEG00000000359	si:ch73-63e15.2	72	67.892	ENSOPRG00000017238	SBNO2	94	68.154	Ochotona_princeps
ENSOMEG00000000359	si:ch73-63e15.2	73	67.296	ENSODEG00000011822	SBNO2	86	67.041	Octodon_degus
ENSOMEG00000000359	si:ch73-63e15.2	100	78.026	ENSONIG00000002490	si:ch73-63e15.2	98	86.390	Oreochromis_niloticus
ENSOMEG00000000359	si:ch73-63e15.2	100	94.388	ENSORLG00000000913	si:ch73-63e15.2	100	94.388	Oryzias_latipes
ENSOMEG00000000359	si:ch73-63e15.2	100	94.675	ENSORLG00020010978	si:ch73-63e15.2	100	94.705	Oryzias_latipes_hni
ENSOMEG00000000359	si:ch73-63e15.2	100	94.452	ENSORLG00015000202	si:ch73-63e15.2	100	94.772	Oryzias_latipes_hsok
ENSOMEG00000000359	si:ch73-63e15.2	75	64.244	ENSOARG00000011130	SBNO2	88	64.394	Ovis_aries
ENSOMEG00000000359	si:ch73-63e15.2	79	62.922	ENSPPAG00000032482	SBNO2	90	66.695	Pan_paniscus
ENSOMEG00000000359	si:ch73-63e15.2	73	67.354	ENSPTRG00000010185	SBNO2	88	67.897	Pan_troglodytes
ENSOMEG00000000359	si:ch73-63e15.2	79	60.680	ENSPANG00000009658	SBNO2	87	63.832	Papio_anubis
ENSOMEG00000000359	si:ch73-63e15.2	65	78.338	ENSPKIG00000009707	-	86	76.892	Paramormyrops_kingsleyae
ENSOMEG00000000359	si:ch73-63e15.2	92	78.947	ENSPKIG00000024201	si:ch73-63e15.2	83	81.700	Paramormyrops_kingsleyae
ENSOMEG00000000359	si:ch73-63e15.2	62	72.892	ENSPSIG00000002852	SBNO2	99	72.691	Pelodiscus_sinensis
ENSOMEG00000000359	si:ch73-63e15.2	82	78.878	ENSPMGG00000014375	si:ch73-63e15.2	95	78.488	Periophthalmus_magnuspinnatus
ENSOMEG00000000359	si:ch73-63e15.2	73	67.448	ENSPEMG00000024122	Sbno2	85	67.448	Peromyscus_maniculatus_bairdii
ENSOMEG00000000359	si:ch73-63e15.2	79	66.877	ENSPCIG00000011264	SBNO2	89	67.690	Phascolarctos_cinereus
ENSOMEG00000000359	si:ch73-63e15.2	100	76.074	ENSPFOG00000004096	si:ch73-63e15.2	100	86.530	Poecilia_formosa
ENSOMEG00000000359	si:ch73-63e15.2	96	75.969	ENSPLAG00000014653	si:ch73-63e15.2	89	81.484	Poecilia_latipinna
ENSOMEG00000000359	si:ch73-63e15.2	100	75.875	ENSPMEG00000002129	si:ch73-63e15.2	96	84.175	Poecilia_mexicana
ENSOMEG00000000359	si:ch73-63e15.2	100	76.126	ENSPREG00000006755	si:ch73-63e15.2	100	76.064	Poecilia_reticulata
ENSOMEG00000000359	si:ch73-63e15.2	67	69.061	ENSPCAG00000012256	SBNO2	77	68.571	Procavia_capensis
ENSOMEG00000000359	si:ch73-63e15.2	79	59.239	ENSPCOG00000015216	SBNO2	90	59.233	Propithecus_coquereli
ENSOMEG00000000359	si:ch73-63e15.2	100	76.802	ENSPNYG00000019926	si:ch73-63e15.2	100	77.814	Pundamilia_nyererei
ENSOMEG00000000359	si:ch73-63e15.2	80	78.776	ENSPNAG00000020260	si:ch73-63e15.2	86	79.553	Pygocentrus_nattereri
ENSOMEG00000000359	si:ch73-63e15.2	80	76.683	ENSPNAG00000026609	sbno2a	99	69.846	Pygocentrus_nattereri
ENSOMEG00000000359	si:ch73-63e15.2	73	67.270	ENSRNOG00000013987	Sbno2	89	67.440	Rattus_norvegicus
ENSOMEG00000000359	si:ch73-63e15.2	73	63.354	ENSRBIG00000009740	SBNO2	86	67.108	Rhinopithecus_bieti
ENSOMEG00000000359	si:ch73-63e15.2	70	64.871	ENSRROG00000044671	SBNO2	85	69.807	Rhinopithecus_roxellana
ENSOMEG00000000359	si:ch73-63e15.2	79	63.442	ENSSBOG00000023562	SBNO2	89	66.926	Saimiri_boliviensis_boliviensis
ENSOMEG00000000359	si:ch73-63e15.2	73	68.825	ENSSHAG00000010241	SBNO2	99	68.569	Sarcophilus_harrisii
ENSOMEG00000000359	si:ch73-63e15.2	86	80.157	ENSSFOG00015005861	si:ch73-63e15.2	95	79.745	Scleropages_formosus
ENSOMEG00000000359	si:ch73-63e15.2	100	77.295	ENSSMAG00000012489	si:ch73-63e15.2	100	77.171	Scophthalmus_maximus
ENSOMEG00000000359	si:ch73-63e15.2	93	80.606	ENSSPAG00000017717	si:ch73-63e15.2	99	80.606	Stegastes_partitus
ENSOMEG00000000359	si:ch73-63e15.2	79	64.167	ENSSSCG00000030042	SBNO2	89	67.767	Sus_scrofa
ENSOMEG00000000359	si:ch73-63e15.2	71	86.637	ENSTRUG00000018193	si:ch73-63e15.2	86	87.364	Takifugu_rubripes
ENSOMEG00000000359	si:ch73-63e15.2	73	64.888	ENSUAMG00000006568	SBNO2	93	70.561	Ursus_americanus
ENSOMEG00000000359	si:ch73-63e15.2	79	64.286	ENSVVUG00000022823	SBNO2	89	63.997	Vulpes_vulpes
ENSOMEG00000000359	si:ch73-63e15.2	67	74.701	ENSXETG00000021579	sbno2	90	75.100	Xenopus_tropicalis
ENSOMEG00000000359	si:ch73-63e15.2	83	88.687	ENSXCOG00000009209	si:ch73-63e15.2	94	89.410	Xiphophorus_couchianus
ENSOMEG00000000359	si:ch73-63e15.2	100	76.400	ENSXMAG00000012091	si:ch73-63e15.2	93	87.040	Xiphophorus_maculatus