EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000000521 (Gene tree)
Gene ID: 112161431
Gene Symbol: tomm20a
Alias: -
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 36903 bases
Position: chrNVQA01000028.1:26570519-26607421
Accession: 112161431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000033510	Tudor-knot	PF11717.8	6e-10	1	1
ENSOMEP00000033560	Tudor-knot	PF11717.8	6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000026689	-	4008	-	ENSOMEP00000033510	1282 (aa)	-	UPI000CF7D4CF
ENSOMET00000035015	-	5480	XM_024296523	ENSOMEP00000017902	1221 (aa)	XP_024152291	UPI000CF8253F
ENSOMET00000026784	-	5663	XM_024296519	ENSOMEP00000033560	1282 (aa)	XP_024152287	UPI000CF7D4CF

Gene Model

Click here to download ENSOMEG00000000521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000521	tomm20a	100	57.368	ENSG00000054267	ARID4B	86	75.240	Homo_sapiens
ENSOMEG00000000521	tomm20a	100	82.096	ENSAPOG00000010823	tomm20a	100	82.249	Acanthochromis_polyacanthus
ENSOMEG00000000521	tomm20a	92	87.112	ENSACIG00000006313	tomm20a	100	87.112	Amphilophus_citrinellus
ENSOMEG00000000521	tomm20a	100	81.714	ENSAOCG00000003330	tomm20a	100	81.867	Amphiprion_ocellaris
ENSOMEG00000000521	tomm20a	100	81.943	ENSAPEG00000024018	tomm20a	100	82.096	Amphiprion_percula
ENSOMEG00000000521	tomm20a	100	79.954	ENSATEG00000014930	tomm20a	100	80.490	Anabas_testudineus
ENSOMEG00000000521	tomm20a	61	45.789	ENSAPLG00000004422	ARID4B	59	45.585	Anas_platyrhynchos
ENSOMEG00000000521	tomm20a	53	60.820	ENSACAG00000001289	ARID4B	99	51.286	Anolis_carolinensis
ENSOMEG00000000521	tomm20a	93	77.273	ENSACLG00000023521	tomm20a	100	75.598	Astatotilapia_calliptera
ENSOMEG00000000521	tomm20a	95	58.767	ENSAMXG00000003657	tomm20a	88	75.545	Astyanax_mexicanus
ENSOMEG00000000521	tomm20a	54	60.676	ENSCJAG00000018055	ARID4B	100	51.983	Callithrix_jacchus
ENSOMEG00000000521	tomm20a	99	51.460	ENSCHIG00000020742	ARID4B	100	50.724	Capra_hircus
ENSOMEG00000000521	tomm20a	54	60.876	ENSTSYG00000010028	ARID4B	100	51.908	Carlito_syrichta
ENSOMEG00000000521	tomm20a	54	60.163	ENSCCAG00000021520	ARID4B	100	52.029	Cebus_capucinus
ENSOMEG00000000521	tomm20a	54	60.190	ENSCATG00000042166	ARID4B	100	52.052	Cercocebus_atys
ENSOMEG00000000521	tomm20a	54	60.300	ENSCSAG00000010069	ARID4B	100	52.124	Chlorocebus_sabaeus
ENSOMEG00000000521	tomm20a	53	58.457	ENSCPBG00000004501	ARID4B	100	50.435	Chrysemys_picta_bellii
ENSOMEG00000000521	tomm20a	54	57.916	ENSCANG00000027498	ARID4B	100	50.397	Colobus_angolensis_palliatus
ENSOMEG00000000521	tomm20a	99	75.736	ENSCSEG00000012928	tomm20a	100	76.049	Cynoglossus_semilaevis
ENSOMEG00000000521	tomm20a	100	77.778	ENSCVAG00000003244	tomm20a	100	78.851	Cyprinodon_variegatus
ENSOMEG00000000521	tomm20a	100	64.828	ENSDARG00000090656	tomm20a	100	64.747	Danio_rerio
ENSOMEG00000000521	tomm20a	99	53.061	ENSDORG00000006422	Arid4b	100	52.357	Dipodomys_ordii
ENSOMEG00000000521	tomm20a	71	54.944	ENSELUG00000018441	tomm20a	90	53.735	Esox_lucius
ENSOMEG00000000521	tomm20a	54	61.096	ENSFDAG00000014194	ARID4B	99	52.838	Fukomys_damarensis
ENSOMEG00000000521	tomm20a	100	77.846	ENSFHEG00000003798	tomm20a	100	77.659	Fundulus_heteroclitus
ENSOMEG00000000521	tomm20a	90	70.980	ENSGMOG00000018747	tomm20a	93	72.161	Gadus_morhua
ENSOMEG00000000521	tomm20a	99	74.981	ENSGACG00000004298	tomm20a	100	75.381	Gasterosteus_aculeatus
ENSOMEG00000000521	tomm20a	54	60.465	ENSGGOG00000022080	ARID4B	100	51.905	Gorilla_gorilla
ENSOMEG00000000521	tomm20a	100	77.820	ENSHBUG00000020369	tomm20a	100	78.281	Haplochromis_burtoni
ENSOMEG00000000521	tomm20a	98	79.476	ENSHCOG00000010376	tomm20a	100	74.587	Hippocampus_comes
ENSOMEG00000000521	tomm20a	100	61.890	ENSIPUG00000014234	arid4b	99	62.162	Ictalurus_punctatus
ENSOMEG00000000521	tomm20a	53	59.973	ENSJJAG00000021368	Arid4b	55	61.885	Jaculus_jaculus
ENSOMEG00000000521	tomm20a	90	74.341	ENSKMAG00000010987	tomm20a	99	75.300	Kryptolebias_marmoratus
ENSOMEG00000000521	tomm20a	100	60.456	ENSLOCG00000015899	tomm20a	100	61.229	Lepisosteus_oculatus
ENSOMEG00000000521	tomm20a	54	60.660	ENSLAFG00000014295	ARID4B	99	52.058	Loxodonta_africana
ENSOMEG00000000521	tomm20a	54	60.300	ENSMFAG00000044016	ARID4B	100	52.052	Macaca_fascicularis
ENSOMEG00000000521	tomm20a	54	60.300	ENSMMUG00000007141	ARID4B	100	52.052	Macaca_mulatta
ENSOMEG00000000521	tomm20a	53	60.333	ENSMLEG00000033583	ARID4B	100	51.997	Mandrillus_leucophaeus
ENSOMEG00000000521	tomm20a	93	78.454	ENSMAMG00000017134	tomm20a	99	78.926	Mastacembelus_armatus
ENSOMEG00000000521	tomm20a	100	77.897	ENSMZEG00005009879	tomm20a	100	78.358	Maylandia_zebra
ENSOMEG00000000521	tomm20a	99	52.894	ENSMICG00000016358	ARID4B	100	51.969	Microcebus_murinus
ENSOMEG00000000521	tomm20a	93	83.772	ENSMMOG00000000561	tomm20a	100	82.675	Mola_mola
ENSOMEG00000000521	tomm20a	100	79.739	ENSMALG00000005205	tomm20a	100	79.969	Monopterus_albus
ENSOMEG00000000521	tomm20a	93	84.561	ENSNBRG00000019684	tomm20a	100	85.748	Neolamprologus_brichardi
ENSOMEG00000000521	tomm20a	54	60.437	ENSNLEG00000002665	ARID4B	100	51.908	Nomascus_leucogenys
ENSOMEG00000000521	tomm20a	54	61.202	ENSODEG00000005373	ARID4B	100	52.475	Octodon_degus
ENSOMEG00000000521	tomm20a	54	59.891	ENSOCUG00000006605	ARID4B	99	51.478	Oryctolagus_cuniculus
ENSOMEG00000000521	tomm20a	100	92.320	ENSORLG00000012510	tomm20a	100	92.475	Oryzias_latipes
ENSOMEG00000000521	tomm20a	92	90.909	ENSORLG00020013988	tomm20a	100	93.541	Oryzias_latipes_hni
ENSOMEG00000000521	tomm20a	92	91.587	ENSORLG00015022835	tomm20a	100	93.750	Oryzias_latipes_hsok
ENSOMEG00000000521	tomm20a	54	57.547	ENSOGAG00000012476	ARID4B	56	57.373	Otolemur_garnettii
ENSOMEG00000000521	tomm20a	99	52.859	ENSOARG00000003481	ARID4B	97	52.467	Ovis_aries
ENSOMEG00000000521	tomm20a	54	60.246	ENSPPAG00000031651	ARID4B	100	51.796	Pan_paniscus
ENSOMEG00000000521	tomm20a	100	52.830	ENSPPRG00000013739	ARID4B	100	53.416	Panthera_pardus
ENSOMEG00000000521	tomm20a	100	53.245	ENSPTIG00000012520	ARID4B	100	53.761	Panthera_tigris_altaica
ENSOMEG00000000521	tomm20a	54	60.246	ENSPTRG00000002129	ARID4B	100	51.868	Pan_troglodytes
ENSOMEG00000000521	tomm20a	54	59.178	ENSPANG00000013611	ARID4B	99	51.659	Papio_anubis
ENSOMEG00000000521	tomm20a	93	48.926	ENSPSIG00000011632	ARID4B	99	48.452	Pelodiscus_sinensis
ENSOMEG00000000521	tomm20a	100	52.597	ENSPCIG00000029756	ARID4B	100	52.902	Phascolarctos_cinereus
ENSOMEG00000000521	tomm20a	100	79.068	ENSPFOG00000019430	tomm20a	100	78.839	Poecilia_formosa
ENSOMEG00000000521	tomm20a	100	79.068	ENSPLAG00000010554	tomm20a	100	78.839	Poecilia_latipinna
ENSOMEG00000000521	tomm20a	100	77.113	ENSPMEG00000003093	tomm20a	100	72.802	Poecilia_mexicana
ENSOMEG00000000521	tomm20a	100	79.096	ENSPREG00000007996	tomm20a	100	79.173	Poecilia_reticulata
ENSOMEG00000000521	tomm20a	54	60.656	ENSPPYG00000000098	ARID4B	100	51.940	Pongo_abelii
ENSOMEG00000000521	tomm20a	93	56.314	ENSPVAG00000015159	ARID4B	100	52.314	Pteropus_vampyrus
ENSOMEG00000000521	tomm20a	99	72.713	ENSPNYG00000013988	tomm20a	100	73.021	Pundamilia_nyererei
ENSOMEG00000000521	tomm20a	100	65.185	ENSPNAG00000000523	tomm20a	93	64.834	Pygocentrus_nattereri
ENSOMEG00000000521	tomm20a	87	47.714	ENSRNOG00000016391	LOC100912163	98	47.277	Rattus_norvegicus
ENSOMEG00000000521	tomm20a	88	58.496	ENSRBIG00000042029	ARID4B	96	48.868	Rhinopithecus_bieti
ENSOMEG00000000521	tomm20a	54	60.164	ENSRROG00000045203	ARID4B	100	51.908	Rhinopithecus_roxellana
ENSOMEG00000000521	tomm20a	54	59.918	ENSSHAG00000015214	ARID4B	100	51.916	Sarcophilus_harrisii
ENSOMEG00000000521	tomm20a	75	52.069	ENSSFOG00015008923	tomm20a	100	53.869	Scleropages_formosus
ENSOMEG00000000521	tomm20a	100	59.358	ENSSFOG00015000132	arid4b	100	60.942	Scleropages_formosus
ENSOMEG00000000521	tomm20a	100	77.102	ENSSMAG00000010430	tomm20a	100	77.794	Scophthalmus_maximus
ENSOMEG00000000521	tomm20a	100	81.825	ENSSDUG00000003019	tomm20a	100	81.902	Seriola_dumerili
ENSOMEG00000000521	tomm20a	100	80.778	ENSSPAG00000007358	tomm20a	100	81.379	Stegastes_partitus
ENSOMEG00000000521	tomm20a	68	67.728	ENSTRUG00000002893	tomm20a	100	67.947	Takifugu_rubripes
ENSOMEG00000000521	tomm20a	71	68.127	ENSTBEG00000003961	ARID4B	69	67.397	Tupaia_belangeri
ENSOMEG00000000521	tomm20a	100	51.571	ENSTTRG00000002228	ARID4B	100	51.854	Tursiops_truncatus
ENSOMEG00000000521	tomm20a	100	49.741	ENSXETG00000024651	arid4b	67	71.981	Xenopus_tropicalis
ENSOMEG00000000521	tomm20a	100	79.231	ENSXMAG00000006538	tomm20a	100	79.231	Xiphophorus_maculatus