EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000000539 (Gene tree)
Gene ID
112160781
Gene Symbol
CPSF7
Alias
-
Full Name
cleavage and polyadenylation specificity factor subunit 7-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
7039 bases
Position
chrNVQA01000027.1:19339222-19346260
Accession
112160781
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000018786RRM_1PF00076.220.0001811
ENSOMEP00000034115RRM_1PF00076.220.0001811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000027855CPSF7-2024056-ENSOMEP00000018786453 (aa)XP_024151344UPI000CF7D0F2
ENSOMET00000027833CPSF7-2013221-ENSOMEP00000034115453 (aa)XP_024151344UPI000CF7D0F2
Gene Model
Click here to download ENSOMEG00000000539's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000539's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000000539CPSF77240.805ENSOMEG00000009425cpsf66836.797
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000000539CPSF77838.235ENSG00000111605CPSF67236.797Homo_sapiens
ENSOMEG00000000539CPSF78637.129ENSG00000149532CPSF79740.750Homo_sapiens
ENSOMEG00000000539CPSF76049.206ENSAMEG00000016595CPSF76444.444Ailuropoda_melanoleuca
ENSOMEG00000000539CPSF77838.235ENSAMEG00000011781CPSF66937.799Ailuropoda_melanoleuca
ENSOMEG00000000539CPSF77240.462ENSACIG00000018413cpsf66537.229Amphilophus_citrinellus
ENSOMEG00000000539CPSF79459.735ENSAOCG00000012357CPSF710057.764Amphiprion_ocellaris
ENSOMEG00000000539CPSF77240.805ENSAOCG00000017865cpsf66836.797Amphiprion_ocellaris
ENSOMEG00000000539CPSF79459.735ENSAPEG00000015375CPSF710057.764Amphiprion_percula
ENSOMEG00000000539CPSF76940.244ENSACAG00000004381CPSF67135.371Anolis_carolinensis
ENSOMEG00000000539CPSF77037.267ENSANAG00000019240CPSF69730.425Aotus_nancymaae
ENSOMEG00000000539CPSF78033.886ENSANAG00000024635CPSF78933.787Aotus_nancymaae
ENSOMEG00000000539CPSF77340.462ENSACLG00000026325cpsf66537.069Astatotilapia_calliptera
ENSOMEG00000000539CPSF76741.584ENSAMXG00000016745CPSF66139.881Astyanax_mexicanus
ENSOMEG00000000539CPSF77838.235ENSBTAG00000007323CPSF67236.797Bos_taurus
ENSOMEG00000000539CPSF78037.530ENSBTAG00000015263CPSF79738.071Bos_taurus
ENSOMEG00000000539CPSF78336.927ENSCJAG00000019282CPSF79740.750Callithrix_jacchus
ENSOMEG00000000539CPSF77838.235ENSCJAG00000001798CPSF67236.797Callithrix_jacchus
ENSOMEG00000000539CPSF78337.156ENSCAFG00000016152CPSF79738.071Canis_familiaris
ENSOMEG00000000539CPSF77037.267ENSCAFG00000000424CPSF69230.353Canis_familiaris
ENSOMEG00000000539CPSF78037.767ENSCAFG00020012753CPSF79738.071Canis_lupus_dingo
ENSOMEG00000000539CPSF77838.235ENSCAFG00020016950CPSF67236.797Canis_lupus_dingo
ENSOMEG00000000539CPSF77838.235ENSCHIG00000010792CPSF67236.797Capra_hircus
ENSOMEG00000000539CPSF78037.530ENSCHIG00000014655CPSF79738.071Capra_hircus
ENSOMEG00000000539CPSF77037.267ENSTSYG00000008591CPSF69632.618Carlito_syrichta
ENSOMEG00000000539CPSF78037.767ENSTSYG00000010138-9738.071Carlito_syrichta
ENSOMEG00000000539CPSF77537.563ENSCAPG00000006384CPSF79638.191Cavia_aperea
ENSOMEG00000000539CPSF77537.267ENSCPOG00000015201CPSF67236.797Cavia_porcellus
ENSOMEG00000000539CPSF78037.767ENSCPOG00000009980CPSF79738.071Cavia_porcellus
ENSOMEG00000000539CPSF77838.235ENSCCAG00000028149CPSF67236.797Cebus_capucinus
ENSOMEG00000000539CPSF78336.927ENSCCAG00000032367CPSF79737.563Cebus_capucinus
ENSOMEG00000000539CPSF77838.235ENSCATG00000039288CPSF67236.797Cercocebus_atys
ENSOMEG00000000539CPSF78336.927ENSCATG00000042801CPSF79740.750Cercocebus_atys
ENSOMEG00000000539CPSF77537.037ENSCLAG00000010149CPSF67538.028Chinchilla_lanigera
ENSOMEG00000000539CPSF78037.767ENSCLAG00000003174CPSF79738.071Chinchilla_lanigera
ENSOMEG00000000539CPSF77838.235ENSCSAG00000004232CPSF66937.799Chlorocebus_sabaeus
ENSOMEG00000000539CPSF78038.835ENSCSAG00000006414CPSF79740.750Chlorocebus_sabaeus
ENSOMEG00000000539CPSF76537.267ENSCPBG00000013322CPSF67236.797Chrysemys_picta_bellii
ENSOMEG00000000539CPSF78738.710ENSCSAVG00000000161-6933.663Ciona_savignyi
ENSOMEG00000000539CPSF77037.267ENSCANG00000037294CPSF67136.797Colobus_angolensis_palliatus
ENSOMEG00000000539CPSF78037.767ENSCGRG00001020382Cpsf79738.071Cricetulus_griseus_chok1gshd
ENSOMEG00000000539CPSF77838.235ENSCGRG00001018082Cpsf67438.028Cricetulus_griseus_chok1gshd
ENSOMEG00000000539CPSF77037.267ENSCGRG00000016909Cpsf67338.028Cricetulus_griseus_crigri
ENSOMEG00000000539CPSF78040.686ENSCGRG00000017954Cpsf79740.602Cricetulus_griseus_crigri
ENSOMEG00000000539CPSF78455.844ENSCSEG00000001956CPSF79852.747Cynoglossus_semilaevis
ENSOMEG00000000539CPSF76540.606ENSCVAG00000014857cpsf69431.403Cyprinodon_variegatus
ENSOMEG00000000539CPSF78656.456ENSCVAG00000007392CPSF79854.371Cyprinodon_variegatus
ENSOMEG00000000539CPSF76439.306ENSDARG00000018618cpsf66040.000Danio_rerio
ENSOMEG00000000539CPSF77838.012ENSDNOG00000015292CPSF67236.797Dasypus_novemcinctus
ENSOMEG00000000539CPSF78038.830ENSDNOG00000018517CPSF79738.071Dasypus_novemcinctus
ENSOMEG00000000539CPSF77037.267ENSDORG00000002950Cpsf67238.028Dipodomys_ordii
ENSOMEG00000000539CPSF75340.000ENSETEG00000002097CPSF66433.333Echinops_telfairi
ENSOMEG00000000539CPSF78036.830ENSETEG00000003765CPSF79737.136Echinops_telfairi
ENSOMEG00000000539CPSF78037.767ENSEASG00005008196CPSF79738.071Equus_asinus_asinus
ENSOMEG00000000539CPSF77838.235ENSEASG00005008066CPSF67236.797Equus_asinus_asinus
ENSOMEG00000000539CPSF78038.889ENSECAG00000018521CPSF79735.349Equus_caballus
ENSOMEG00000000539CPSF77838.235ENSECAG00000015988CPSF67236.797Equus_caballus
ENSOMEG00000000539CPSF75150.442ENSEEUG00000005966-6550.442Erinaceus_europaeus
ENSOMEG00000000539CPSF77037.267ENSEEUG00000015039CPSF66837.799Erinaceus_europaeus
ENSOMEG00000000539CPSF77838.235ENSFCAG00000002855CPSF67236.797Felis_catus
ENSOMEG00000000539CPSF78337.156ENSFCAG00000013677CPSF79738.071Felis_catus
ENSOMEG00000000539CPSF76037.037ENSFALG00000010157CPSF67338.028Ficedula_albicollis
ENSOMEG00000000539CPSF78036.500ENSFALG00000011927CPSF77551.128Ficedula_albicollis
ENSOMEG00000000539CPSF78038.498ENSFDAG00000003919CPSF79738.579Fukomys_damarensis
ENSOMEG00000000539CPSF77037.267ENSFDAG00000002281CPSF66936.797Fukomys_damarensis
ENSOMEG00000000539CPSF78135.922ENSGALG00000040962CPSF77439.651Gallus_gallus
ENSOMEG00000000539CPSF76147.458ENSGACG00000019685cpsf67034.649Gasterosteus_aculeatus
ENSOMEG00000000539CPSF76537.267ENSGAGG00000010228CPSF67236.797Gopherus_agassizii
ENSOMEG00000000539CPSF77838.012ENSGGOG00000008211CPSF67438.028Gorilla_gorilla
ENSOMEG00000000539CPSF77340.462ENSHBUG00000005998cpsf66937.069Haplochromis_burtoni
ENSOMEG00000000539CPSF77537.267ENSHGLG00000000792CPSF67236.797Heterocephalus_glaber_female
ENSOMEG00000000539CPSF78039.078ENSHGLG00000019090-9738.693Heterocephalus_glaber_female
ENSOMEG00000000539CPSF78039.750ENSHGLG00100013933-9236.667Heterocephalus_glaber_male
ENSOMEG00000000539CPSF77037.267ENSHGLG00100013861CPSF67136.797Heterocephalus_glaber_male
ENSOMEG00000000539CPSF76246.875ENSHCOG00000014555cpsf67037.768Hippocampus_comes
ENSOMEG00000000539CPSF77037.267ENSSTOG00000014133CPSF67338.028Ictidomys_tridecemlineatus
ENSOMEG00000000539CPSF78037.767ENSSTOG00000007708CPSF79738.071Ictidomys_tridecemlineatus
ENSOMEG00000000539CPSF77037.267ENSJJAG00000014647Cpsf67338.028Jaculus_jaculus
ENSOMEG00000000539CPSF78039.078ENSJJAG00000019390Cpsf79740.852Jaculus_jaculus
ENSOMEG00000000539CPSF75744.444ENSKMAG00000014794cpsf66039.394Kryptolebias_marmoratus
ENSOMEG00000000539CPSF76146.610ENSLBEG00000015762cpsf66435.371Labrus_bergylta
ENSOMEG00000000539CPSF78060.541ENSLBEG00000000947CPSF79658.478Labrus_bergylta
ENSOMEG00000000539CPSF77838.235ENSLOCG00000016190cpsf65639.535Lepisosteus_oculatus
ENSOMEG00000000539CPSF78037.767ENSLAFG00000032084CPSF79738.071Loxodonta_africana
ENSOMEG00000000539CPSF77838.235ENSLAFG00000030413CPSF68433.005Loxodonta_africana
ENSOMEG00000000539CPSF77838.235ENSMFAG00000045318CPSF67236.797Macaca_fascicularis
ENSOMEG00000000539CPSF78336.927ENSMFAG00000001401CPSF79737.563Macaca_fascicularis
ENSOMEG00000000539CPSF78336.927ENSMMUG00000015280CPSF79740.750Macaca_mulatta
ENSOMEG00000000539CPSF77838.012ENSMMUG00000002921CPSF67438.028Macaca_mulatta
ENSOMEG00000000539CPSF78038.835ENSMNEG00000029585CPSF79740.750Macaca_nemestrina
ENSOMEG00000000539CPSF77838.235ENSMNEG00000036311CPSF67236.797Macaca_nemestrina
ENSOMEG00000000539CPSF77037.267ENSMLEG00000003957CPSF67136.797Mandrillus_leucophaeus
ENSOMEG00000000539CPSF78336.927ENSMLEG00000031269CPSF79737.563Mandrillus_leucophaeus
ENSOMEG00000000539CPSF75839.884ENSMAMG00000010385cpsf66836.207Mastacembelus_armatus
ENSOMEG00000000539CPSF77340.462ENSMZEG00005007975cpsf66937.069Maylandia_zebra
ENSOMEG00000000539CPSF77440.777ENSMGAG00000004876CPSF76145.455Meleagris_gallopavo
ENSOMEG00000000539CPSF76037.267ENSMGAG00000010552CPSF67836.797Meleagris_gallopavo
ENSOMEG00000000539CPSF77838.235ENSMAUG00000013240Cpsf67236.797Mesocricetus_auratus
ENSOMEG00000000539CPSF78037.767ENSMAUG00000013020Cpsf79738.071Mesocricetus_auratus
ENSOMEG00000000539CPSF78037.767ENSMICG00000013788CPSF79738.071Microcebus_murinus
ENSOMEG00000000539CPSF77838.235ENSMICG00000007385-7438.028Microcebus_murinus
ENSOMEG00000000539CPSF77838.235ENSMOCG00000013982Cpsf67438.028Microtus_ochrogaster
ENSOMEG00000000539CPSF78038.005ENSMOCG00000000072Cpsf79738.071Microtus_ochrogaster
ENSOMEG00000000539CPSF77537.267ENSMODG00000007123CPSF67236.797Monodelphis_domestica
ENSOMEG00000000539CPSF77240.805ENSMALG00000014908cpsf67437.229Monopterus_albus
ENSOMEG00000000539CPSF77838.235MGP_CAROLIEiJ_G0015834Cpsf67438.028Mus_caroli
ENSOMEG00000000539CPSF78037.972MGP_CAROLIEiJ_G0022690Cpsf79738.071Mus_caroli
ENSOMEG00000000539CPSF76838.235ENSMUSG00000055531Cpsf67438.028Mus_musculus
ENSOMEG00000000539CPSF78037.972ENSMUSG00000034820Cpsf79738.071Mus_musculus
ENSOMEG00000000539CPSF78037.972MGP_PahariEiJ_G0014184Cpsf79738.071Mus_pahari
ENSOMEG00000000539CPSF76838.235MGP_SPRETEiJ_G0016657Cpsf67438.028Mus_spretus
ENSOMEG00000000539CPSF78037.972MGP_SPRETEiJ_G0023604Cpsf79738.071Mus_spretus
ENSOMEG00000000539CPSF76838.827ENSMPUG00000014163CPSF79137.056Mustela_putorius_furo
ENSOMEG00000000539CPSF76237.013ENSMPUG00000017502CPSF65238.028Mustela_putorius_furo
ENSOMEG00000000539CPSF76237.013ENSMLUG00000004172-5238.028Myotis_lucifugus
ENSOMEG00000000539CPSF78038.835ENSMLUG00000013278CPSF79740.602Myotis_lucifugus
ENSOMEG00000000539CPSF77838.235ENSNGAG00000015901Cpsf67438.028Nannospalax_galili
ENSOMEG00000000539CPSF78037.767ENSNGAG00000005031Cpsf79738.071Nannospalax_galili
ENSOMEG00000000539CPSF77240.462ENSNBRG00000004089cpsf66837.069Neolamprologus_brichardi
ENSOMEG00000000539CPSF77838.235ENSNLEG00000003798CPSF67236.797Nomascus_leucogenys
ENSOMEG00000000539CPSF78237.123ENSNLEG00000002529CPSF79137.563Nomascus_leucogenys
ENSOMEG00000000539CPSF76344.660ENSMEUG00000015041CPSF66937.321Notamacropus_eugenii
ENSOMEG00000000539CPSF76037.267ENSOPRG00000005199CPSF66837.799Ochotona_princeps
ENSOMEG00000000539CPSF77137.037ENSODEG00000004418-7336.530Octodon_degus
ENSOMEG00000000539CPSF78037.500ENSODEG00000002610CPSF79738.000Octodon_degus
ENSOMEG00000000539CPSF77941.463ENSODEG00000018399-5938.596Octodon_degus
ENSOMEG00000000539CPSF77240.462ENSONIG00000011702cpsf66537.500Oreochromis_niloticus
ENSOMEG00000000539CPSF75143.750ENSOANG00000005944CPSF66941.406Ornithorhynchus_anatinus
ENSOMEG00000000539CPSF78037.915ENSOCUG00000024726CPSF78937.500Oryctolagus_cuniculus
ENSOMEG00000000539CPSF77838.235ENSOCUG00000013505CPSF66937.799Oryctolagus_cuniculus
ENSOMEG00000000539CPSF77239.884ENSORLG00000013893cpsf66836.797Oryzias_latipes
ENSOMEG00000000539CPSF710083.007ENSORLG00000006495CPSF710083.224Oryzias_latipes
ENSOMEG00000000539CPSF710083.442ENSORLG00020012657CPSF710083.660Oryzias_latipes_hni
ENSOMEG00000000539CPSF77239.884ENSORLG00020016593cpsf66836.797Oryzias_latipes_hni
ENSOMEG00000000539CPSF77239.884ENSORLG00015015558cpsf66836.797Oryzias_latipes_hsok
ENSOMEG00000000539CPSF710081.481ENSORLG00015011091CPSF710081.046Oryzias_latipes_hsok
ENSOMEG00000000539CPSF78337.156ENSOGAG00000027958CPSF79338.071Otolemur_garnettii
ENSOMEG00000000539CPSF76237.013ENSOGAG00000031988CPSF65338.028Otolemur_garnettii
ENSOMEG00000000539CPSF76049.194ENSOARG00000012937CPSF75947.482Ovis_aries
ENSOMEG00000000539CPSF77037.037ENSOARG00000020532CPSF66838.028Ovis_aries
ENSOMEG00000000539CPSF78237.123ENSPPAG00000028232CPSF79637.563Pan_paniscus
ENSOMEG00000000539CPSF77037.037ENSPPAG00000005301CPSF66536.813Pan_paniscus
ENSOMEG00000000539CPSF78740.659ENSPPRG00000008538CPSF79338.071Panthera_pardus
ENSOMEG00000000539CPSF77838.235ENSPPRG00000021620CPSF67236.797Panthera_pardus
ENSOMEG00000000539CPSF78037.767ENSPTIG00000021699CPSF79738.071Panthera_tigris_altaica
ENSOMEG00000000539CPSF75140.217ENSPTIG00000004079CPSF66939.048Panthera_tigris_altaica
ENSOMEG00000000539CPSF78037.530ENSPTRG00000003742CPSF79737.563Pan_troglodytes
ENSOMEG00000000539CPSF77838.012ENSPTRG00000005205CPSF67438.028Pan_troglodytes
ENSOMEG00000000539CPSF78336.927ENSPANG00000006037CPSF79437.563Papio_anubis
ENSOMEG00000000539CPSF78843.750ENSPANG00000011641CPSF67537.879Papio_anubis
ENSOMEG00000000539CPSF78039.078ENSPEMG00000012648Cpsf79740.852Peromyscus_maniculatus_bairdii
ENSOMEG00000000539CPSF77937.267ENSPEMG00000007973Cpsf67037.838Peromyscus_maniculatus_bairdii
ENSOMEG00000000539CPSF77537.267ENSPCIG00000019063CPSF67236.797Phascolarctos_cinereus
ENSOMEG00000000539CPSF78735.111ENSPCIG00000002551CPSF79736.099Phascolarctos_cinereus
ENSOMEG00000000539CPSF78037.530ENSPPYG00000003188CPSF79737.563Pongo_abelii
ENSOMEG00000000539CPSF77838.235ENSPPYG00000004756CPSF67236.797Pongo_abelii
ENSOMEG00000000539CPSF77838.235ENSPCAG00000011574CPSF66937.799Procavia_capensis
ENSOMEG00000000539CPSF77537.037ENSPCOG00000024384CPSF67236.087Propithecus_coquereli
ENSOMEG00000000539CPSF78037.767ENSPCOG00000011976CPSF79738.071Propithecus_coquereli
ENSOMEG00000000539CPSF76837.647ENSPVAG00000015753CPSF66937.981Pteropus_vampyrus
ENSOMEG00000000539CPSF78037.767ENSPVAG00000010675CPSF79738.071Pteropus_vampyrus
ENSOMEG00000000539CPSF77340.462ENSPNYG00000020315cpsf66537.069Pundamilia_nyererei
ENSOMEG00000000539CPSF76838.235ENSRNOG00000005927Cpsf67236.797Rattus_norvegicus
ENSOMEG00000000539CPSF78039.277ENSRNOG00000020668Cpsf79741.000Rattus_norvegicus
ENSOMEG00000000539CPSF78336.927ENSRBIG00000031429CPSF79740.750Rhinopithecus_bieti
ENSOMEG00000000539CPSF77838.012ENSRBIG00000042827CPSF67236.797Rhinopithecus_bieti
ENSOMEG00000000539CPSF77838.235ENSRROG00000042758CPSF67236.797Rhinopithecus_roxellana
ENSOMEG00000000539CPSF78336.927ENSRROG00000045009CPSF79737.563Rhinopithecus_roxellana
ENSOMEG00000000539CPSF77037.037ENSSBOG00000010652CPSF66740.217Saimiri_boliviensis_boliviensis
ENSOMEG00000000539CPSF78037.530ENSSBOG00000018431CPSF79737.563Saimiri_boliviensis_boliviensis
ENSOMEG00000000539CPSF76435.673ENSSHAG00000006635CPSF67032.857Sarcophilus_harrisii
ENSOMEG00000000539CPSF79247.100ENSSFOG00015010288cpsf79845.064Scleropages_formosus
ENSOMEG00000000539CPSF77241.040ENSSFOG00015001688CPSF66036.364Scleropages_formosus
ENSOMEG00000000539CPSF77239.884ENSSDUG00000005024cpsf66836.207Seriola_dumerili
ENSOMEG00000000539CPSF77239.884ENSSLDG00000009042cpsf66836.207Seriola_lalandi_dorsalis
ENSOMEG00000000539CPSF78439.130ENSSARG00000006743CPSF66736.087Sorex_araneus
ENSOMEG00000000539CPSF75642.982ENSSPUG00000001238CPSF65043.836Sphenodon_punctatus
ENSOMEG00000000539CPSF76047.458ENSSPAG00000013906cpsf66836.364Stegastes_partitus
ENSOMEG00000000539CPSF78039.096ENSSSCG00000013083CPSF79738.071Sus_scrofa
ENSOMEG00000000539CPSF77838.235ENSSSCG00000038031CPSF67236.797Sus_scrofa
ENSOMEG00000000539CPSF77339.884ENSTRUG00000016461cpsf67037.768Takifugu_rubripes
ENSOMEG00000000539CPSF76238.947ENSTNIG00000007576cpsf67037.768Tetraodon_nigroviridis
ENSOMEG00000000539CPSF76841.499ENSTTRG00000011085CPSF79637.755Tursiops_truncatus
ENSOMEG00000000539CPSF78037.767ENSUAMG00000017809CPSF79738.071Ursus_americanus
ENSOMEG00000000539CPSF75140.217ENSUAMG00000023492CPSF66740.217Ursus_americanus
ENSOMEG00000000539CPSF75140.217ENSUMAG00000020779CPSF66741.111Ursus_maritimus
ENSOMEG00000000539CPSF78039.078ENSUMAG00000011825CPSF79740.852Ursus_maritimus
ENSOMEG00000000539CPSF77037.267ENSVPAG00000008469CPSF66837.799Vicugna_pacos
ENSOMEG00000000539CPSF75140.217ENSVVUG00000010156-6440.217Vulpes_vulpes
ENSOMEG00000000539CPSF78337.327ENSVVUG00000004939CPSF78438.071Vulpes_vulpes
ENSOMEG00000000539CPSF76638.418ENSXETG00000006715cpsf76343.949Xenopus_tropicalis
ENSOMEG00000000539CPSF76439.000ENSXCOG00000013423cpsf67636.245Xiphophorus_couchianus

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