EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000000551 (Gene tree)
Gene ID: 112138587
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 18459 bases
Position: chrNVQA01001358.1:97118-115576
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000034244	YTH	PF04146.15	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000028077	-	6005	-	ENSOMEP00000034244	660 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000000551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000551	ythdc1	60	65.526	ENSG00000083896	YTHDC1	56	61.520	Homo_sapiens
ENSOMEG00000000551	ythdc1	95	71.969	ENSAPOG00000013997	ythdc1	93	73.858	Acanthochromis_polyacanthus
ENSOMEG00000000551	ythdc1	60	64.977	ENSAMEG00000005688	YTHDC1	57	61.149	Ailuropoda_melanoleuca
ENSOMEG00000000551	ythdc1	82	76.413	ENSACIG00000019728	ythdc1	90	76.601	Amphilophus_citrinellus
ENSOMEG00000000551	ythdc1	95	77.984	ENSAOCG00000000239	ythdc1	94	77.984	Amphiprion_ocellaris
ENSOMEG00000000551	ythdc1	85	78.634	ENSAPEG00000000618	ythdc1	88	79.225	Amphiprion_percula
ENSOMEG00000000551	ythdc1	89	75.788	ENSATEG00000023007	ythdc1	96	75.585	Anabas_testudineus
ENSOMEG00000000551	ythdc1	93	55.672	ENSAPLG00000009921	YTHDC1	60	61.379	Anas_platyrhynchos
ENSOMEG00000000551	ythdc1	94	55.213	ENSACAG00000009697	YTHDC1	93	52.098	Anolis_carolinensis
ENSOMEG00000000551	ythdc1	60	65.526	ENSANAG00000001522	YTHDC1	56	61.520	Aotus_nancymaae
ENSOMEG00000000551	ythdc1	95	78.173	ENSACLG00000019371	ythdc1	94	77.984	Astatotilapia_calliptera
ENSOMEG00000000551	ythdc1	94	60.060	ENSAMXG00000006978	ythdc1	92	59.847	Astyanax_mexicanus
ENSOMEG00000000551	ythdc1	60	64.286	ENSBTAG00000015572	YTHDC1	57	60.230	Bos_taurus
ENSOMEG00000000551	ythdc1	60	65.526	ENSCJAG00000009934	YTHDC1	56	61.520	Callithrix_jacchus
ENSOMEG00000000551	ythdc1	60	64.977	ENSCAFG00000002821	YTHDC1	57	61.149	Canis_familiaris
ENSOMEG00000000551	ythdc1	60	64.977	ENSCAFG00020027112	YTHDC1	57	61.149	Canis_lupus_dingo
ENSOMEG00000000551	ythdc1	72	53.371	ENSCHIG00000004810	YTHDC1	54	54.567	Capra_hircus
ENSOMEG00000000551	ythdc1	60	65.526	ENSTSYG00000011668	YTHDC1	56	61.520	Carlito_syrichta
ENSOMEG00000000551	ythdc1	94	50.143	ENSCPOG00000010929	YTHDC1	54	52.523	Cavia_porcellus
ENSOMEG00000000551	ythdc1	60	65.526	ENSCCAG00000035754	YTHDC1	56	61.520	Cebus_capucinus
ENSOMEG00000000551	ythdc1	72	53.818	ENSCATG00000036320	YTHDC1	56	61.520	Cercocebus_atys
ENSOMEG00000000551	ythdc1	93	54.751	ENSCLAG00000005482	YTHDC1	56	61.275	Chinchilla_lanigera
ENSOMEG00000000551	ythdc1	60	64.516	ENSCSAG00000005252	YTHDC1	57	60.230	Chlorocebus_sabaeus
ENSOMEG00000000551	ythdc1	93	57.054	ENSCPBG00000021965	YTHDC1	94	51.835	Chrysemys_picta_bellii
ENSOMEG00000000551	ythdc1	72	53.631	ENSCANG00000004769	YTHDC1	56	61.520	Colobus_angolensis_palliatus
ENSOMEG00000000551	ythdc1	94	54.383	ENSCGRG00001000816	Ythdc1	56	61.275	Cricetulus_griseus_chok1gshd
ENSOMEG00000000551	ythdc1	93	54.217	ENSCGRG00000009807	Ythdc1	56	61.275	Cricetulus_griseus_crigri
ENSOMEG00000000551	ythdc1	95	74.884	ENSCSEG00000020404	ythdc1	94	74.884	Cynoglossus_semilaevis
ENSOMEG00000000551	ythdc1	95	73.717	ENSCVAG00000022349	ythdc1	94	75.078	Cyprinodon_variegatus
ENSOMEG00000000551	ythdc1	94	59.366	ENSDARG00000051953	ythdc1	92	58.025	Danio_rerio
ENSOMEG00000000551	ythdc1	94	54.690	ENSDNOG00000004949	YTHDC1	57	60.460	Dasypus_novemcinctus
ENSOMEG00000000551	ythdc1	60	65.526	ENSDORG00000013045	Ythdc1	58	60.230	Dipodomys_ordii
ENSOMEG00000000551	ythdc1	76	70.000	ENSETEG00000001878	YTHDC1	59	71.930	Echinops_telfairi
ENSOMEG00000000551	ythdc1	61	64.679	ENSEASG00005018383	YTHDC1	61	61.149	Equus_asinus_asinus
ENSOMEG00000000551	ythdc1	86	66.184	ENSECAG00000018303	YTHDC1	62	67.030	Equus_caballus
ENSOMEG00000000551	ythdc1	60	64.286	ENSEEUG00000015466	YTHDC1	57	60.460	Erinaceus_europaeus
ENSOMEG00000000551	ythdc1	94	58.406	ENSELUG00000014029	ythdc1	92	59.581	Esox_lucius
ENSOMEG00000000551	ythdc1	60	65.770	ENSFCAG00000026791	YTHDC1	56	62.500	Felis_catus
ENSOMEG00000000551	ythdc1	70	66.098	ENSFALG00000006581	YTHDC1	87	62.103	Ficedula_albicollis
ENSOMEG00000000551	ythdc1	93	55.673	ENSFDAG00000018560	YTHDC1	57	61.520	Fukomys_damarensis
ENSOMEG00000000551	ythdc1	95	57.143	ENSFHEG00000001286	ythdc1	68	70.000	Fundulus_heteroclitus
ENSOMEG00000000551	ythdc1	93	56.124	ENSGALG00000035906	YTHDC1	85	52.255	Gallus_gallus
ENSOMEG00000000551	ythdc1	71	68.723	ENSGAFG00000001759	ythdc1	51	84.519	Gambusia_affinis
ENSOMEG00000000551	ythdc1	95	66.327	ENSGACG00000015486	ythdc1	94	65.896	Gasterosteus_aculeatus
ENSOMEG00000000551	ythdc1	94	57.473	ENSGAGG00000007108	YTHDC1	92	55.077	Gopherus_agassizii
ENSOMEG00000000551	ythdc1	72	53.717	ENSGGOG00000021958	YTHDC1	56	61.520	Gorilla_gorilla
ENSOMEG00000000551	ythdc1	95	78.173	ENSHBUG00000019288	ythdc1	94	77.984	Haplochromis_burtoni
ENSOMEG00000000551	ythdc1	94	55.755	ENSHGLG00000006319	-	56	61.520	Heterocephalus_glaber_female
ENSOMEG00000000551	ythdc1	96	44.801	ENSHGLG00000003239	-	52	47.912	Heterocephalus_glaber_female
ENSOMEG00000000551	ythdc1	96	43.379	ENSHGLG00100008060	-	53	45.610	Heterocephalus_glaber_male
ENSOMEG00000000551	ythdc1	94	55.126	ENSHGLG00100001556	-	56	60.437	Heterocephalus_glaber_male
ENSOMEG00000000551	ythdc1	69	75.853	ENSHCOG00000001520	ythdc1	93	75.789	Hippocampus_comes
ENSOMEG00000000551	ythdc1	94	62.187	ENSIPUG00000018136	ythdc1	92	59.688	Ictalurus_punctatus
ENSOMEG00000000551	ythdc1	60	64.269	ENSSTOG00000013652	YTHDC1	56	60.337	Ictidomys_tridecemlineatus
ENSOMEG00000000551	ythdc1	60	65.526	ENSJJAG00000010268	Ythdc1	57	61.765	Jaculus_jaculus
ENSOMEG00000000551	ythdc1	61	82.254	ENSKMAG00000006483	ythdc1	86	82.494	Kryptolebias_marmoratus
ENSOMEG00000000551	ythdc1	68	91.111	ENSLBEG00000020831	ythdc1	81	67.961	Labrus_bergylta
ENSOMEG00000000551	ythdc1	60	64.778	ENSLACG00000004893	YTHDC1	75	57.371	Latimeria_chalumnae
ENSOMEG00000000551	ythdc1	94	56.196	ENSLOCG00000003045	ythdc1	87	54.624	Lepisosteus_oculatus
ENSOMEG00000000551	ythdc1	94	54.208	ENSLAFG00000021592	YTHDC1	65	64.402	Loxodonta_africana
ENSOMEG00000000551	ythdc1	72	53.631	ENSMFAG00000031927	YTHDC1	56	61.520	Macaca_fascicularis
ENSOMEG00000000551	ythdc1	60	65.526	ENSMMUG00000002265	YTHDC1	56	61.520	Macaca_mulatta
ENSOMEG00000000551	ythdc1	72	53.631	ENSMNEG00000033751	YTHDC1	56	61.520	Macaca_nemestrina
ENSOMEG00000000551	ythdc1	72	53.631	ENSMLEG00000042147	YTHDC1	56	61.520	Mandrillus_leucophaeus
ENSOMEG00000000551	ythdc1	60	83.415	ENSMAMG00000013122	ythdc1	92	75.538	Mastacembelus_armatus
ENSOMEG00000000551	ythdc1	95	78.173	ENSMZEG00005023173	ythdc1	94	77.984	Maylandia_zebra
ENSOMEG00000000551	ythdc1	94	55.735	ENSMGAG00000010391	YTHDC1	58	61.432	Meleagris_gallopavo
ENSOMEG00000000551	ythdc1	94	54.235	ENSMAUG00000001286	Ythdc1	56	61.275	Mesocricetus_auratus
ENSOMEG00000000551	ythdc1	94	54.545	ENSMICG00000034640	YTHDC1	55	62.010	Microcebus_murinus
ENSOMEG00000000551	ythdc1	60	65.281	ENSMOCG00000020201	Ythdc1	56	61.275	Microtus_ochrogaster
ENSOMEG00000000551	ythdc1	76	71.136	ENSMMOG00000021200	ythdc1	93	66.514	Mola_mola
ENSOMEG00000000551	ythdc1	94	55.670	ENSMODG00000020754	-	92	53.304	Monodelphis_domestica
ENSOMEG00000000551	ythdc1	52	49.860	ENSMODG00000004117	-	93	50.755	Monodelphis_domestica
ENSOMEG00000000551	ythdc1	98	38.988	ENSMODG00000010076	-	57	51.752	Monodelphis_domestica
ENSOMEG00000000551	ythdc1	65	47.210	ENSMODG00000009173	-	74	51.482	Monodelphis_domestica
ENSOMEG00000000551	ythdc1	85	78.646	ENSMALG00000013412	ythdc1	93	78.207	Monopterus_albus
ENSOMEG00000000551	ythdc1	60	65.281	MGP_CAROLIEiJ_G0027347	Ythdc1	56	61.275	Mus_caroli
ENSOMEG00000000551	ythdc1	94	53.858	ENSMUSG00000035851	Ythdc1	56	61.029	Mus_musculus
ENSOMEG00000000551	ythdc1	94	54.154	MGP_PahariEiJ_G0017126	Ythdc1	56	61.275	Mus_pahari
ENSOMEG00000000551	ythdc1	94	54.154	MGP_SPRETEiJ_G0028339	Ythdc1	56	61.275	Mus_spretus
ENSOMEG00000000551	ythdc1	69	70.079	ENSMPUG00000001743	YTHDC1	62	67.164	Mustela_putorius_furo
ENSOMEG00000000551	ythdc1	93	54.745	ENSMLUG00000016300	YTHDC1	58	60.920	Myotis_lucifugus
ENSOMEG00000000551	ythdc1	73	78.846	ENSNBRG00000007663	ythdc1	87	78.118	Neolamprologus_brichardi
ENSOMEG00000000551	ythdc1	72	52.985	ENSNLEG00000009202	YTHDC1	92	52.362	Nomascus_leucogenys
ENSOMEG00000000551	ythdc1	70	68.790	ENSOPRG00000008986	YTHDC1	66	65.484	Ochotona_princeps
ENSOMEG00000000551	ythdc1	94	54.627	ENSODEG00000001715	YTHDC1	56	61.275	Octodon_degus
ENSOMEG00000000551	ythdc1	95	93.182	ENSONIG00000012651	ythdc1	95	93.333	Oreochromis_niloticus
ENSOMEG00000000551	ythdc1	88	49.776	ENSOANG00000014398	YTHDC1	55	61.631	Ornithorhynchus_anatinus
ENSOMEG00000000551	ythdc1	95	51.453	ENSOCUG00000015886	YTHDC1	58	71.186	Oryctolagus_cuniculus
ENSOMEG00000000551	ythdc1	95	87.244	ENSORLG00000030544	ythdc1	100	88.376	Oryzias_latipes
ENSOMEG00000000551	ythdc1	95	87.893	ENSORLG00020019316	ythdc1	100	88.839	Oryzias_latipes_hni
ENSOMEG00000000551	ythdc1	60	64.977	ENSOGAG00000003362	YTHDC1	57	60.690	Otolemur_garnettii
ENSOMEG00000000551	ythdc1	60	64.286	ENSOARG00000008633	YTHDC1	57	60.230	Ovis_aries
ENSOMEG00000000551	ythdc1	72	53.818	ENSPPAG00000041315	YTHDC1	93	53.242	Pan_paniscus
ENSOMEG00000000551	ythdc1	60	65.770	ENSPPRG00000011979	YTHDC1	56	62.500	Panthera_pardus
ENSOMEG00000000551	ythdc1	60	65.526	ENSPTIG00000015527	YTHDC1	56	62.255	Panthera_tigris_altaica
ENSOMEG00000000551	ythdc1	72	53.818	ENSPTRG00000016105	YTHDC1	93	53.242	Pan_troglodytes
ENSOMEG00000000551	ythdc1	60	65.526	ENSPANG00000021590	YTHDC1	56	61.520	Papio_anubis
ENSOMEG00000000551	ythdc1	94	59.057	ENSPKIG00000018497	ythdc1	64	61.039	Paramormyrops_kingsleyae
ENSOMEG00000000551	ythdc1	93	55.522	ENSPSIG00000002782	YTHDC1	92	52.608	Pelodiscus_sinensis
ENSOMEG00000000551	ythdc1	60	68.732	ENSPMGG00000000970	-	77	69.697	Periophthalmus_magnuspinnatus
ENSOMEG00000000551	ythdc1	60	65.281	ENSPEMG00000013850	Ythdc1	57	61.275	Peromyscus_maniculatus_bairdii
ENSOMEG00000000551	ythdc1	94	56.569	ENSPCIG00000006870	YTHDC1	92	53.823	Phascolarctos_cinereus
ENSOMEG00000000551	ythdc1	95	74.725	ENSPFOG00000013404	ythdc1	94	75.824	Poecilia_formosa
ENSOMEG00000000551	ythdc1	61	81.553	ENSPLAG00000011079	ythdc1	86	82.039	Poecilia_latipinna
ENSOMEG00000000551	ythdc1	95	74.725	ENSPMEG00000009238	ythdc1	94	75.824	Poecilia_mexicana
ENSOMEG00000000551	ythdc1	95	67.722	ENSPREG00000016973	ythdc1	90	75.763	Poecilia_reticulata
ENSOMEG00000000551	ythdc1	60	64.516	ENSPPYG00000014726	YTHDC1	65	60.230	Pongo_abelii
ENSOMEG00000000551	ythdc1	94	51.946	ENSPCOG00000019105	YTHDC1	54	56.511	Propithecus_coquereli
ENSOMEG00000000551	ythdc1	60	61.751	ENSPVAG00000015551	YTHDC1	56	57.931	Pteropus_vampyrus
ENSOMEG00000000551	ythdc1	95	78.173	ENSPNYG00000011687	ythdc1	94	77.984	Pundamilia_nyererei
ENSOMEG00000000551	ythdc1	94	62.423	ENSPNAG00000028365	ythdc1	92	59.726	Pygocentrus_nattereri
ENSOMEG00000000551	ythdc1	60	63.122	ENSRNOG00000001996	Ythdc1	57	58.916	Rattus_norvegicus
ENSOMEG00000000551	ythdc1	72	53.271	ENSRBIG00000028279	YTHDC1	54	56.511	Rhinopithecus_bieti
ENSOMEG00000000551	ythdc1	72	53.631	ENSRROG00000035028	YTHDC1	56	61.520	Rhinopithecus_roxellana
ENSOMEG00000000551	ythdc1	72	53.631	ENSSBOG00000022353	YTHDC1	56	61.520	Saimiri_boliviensis_boliviensis
ENSOMEG00000000551	ythdc1	94	55.081	ENSSHAG00000002538	YTHDC1	91	53.274	Sarcophilus_harrisii
ENSOMEG00000000551	ythdc1	94	60.429	ENSSFOG00015003298	ythdc1	59	70.244	Scleropages_formosus
ENSOMEG00000000551	ythdc1	95	73.913	ENSSMAG00000009086	ythdc1	94	74.689	Scophthalmus_maximus
ENSOMEG00000000551	ythdc1	95	77.692	ENSSDUG00000022008	ythdc1	94	78.000	Seriola_dumerili
ENSOMEG00000000551	ythdc1	95	77.692	ENSSLDG00000007926	ythdc1	94	78.000	Seriola_lalandi_dorsalis
ENSOMEG00000000551	ythdc1	61	63.991	ENSSARG00000010960	YTHDC1	72	60.690	Sorex_araneus
ENSOMEG00000000551	ythdc1	94	54.421	ENSSPUG00000009357	YTHDC1	61	60.460	Sphenodon_punctatus
ENSOMEG00000000551	ythdc1	95	77.538	ENSSPAG00000011449	ythdc1	94	78.462	Stegastes_partitus
ENSOMEG00000000551	ythdc1	60	64.977	ENSSSCG00000035505	YTHDC1	61	60.045	Sus_scrofa
ENSOMEG00000000551	ythdc1	94	55.588	ENSTGUG00000004452	-	59	60.690	Taeniopygia_guttata
ENSOMEG00000000551	ythdc1	93	62.184	ENSTRUG00000010142	ythdc1	63	72.464	Takifugu_rubripes
ENSOMEG00000000551	ythdc1	98	68.923	ENSTNIG00000013243	ythdc1	62	82.963	Tetraodon_nigroviridis
ENSOMEG00000000551	ythdc1	60	63.825	ENSTTRG00000005083	YTHDC1	57	60.000	Tursiops_truncatus
ENSOMEG00000000551	ythdc1	61	65.450	ENSUAMG00000010388	YTHDC1	60	62.500	Ursus_americanus
ENSOMEG00000000551	ythdc1	93	51.534	ENSUMAG00000013668	YTHDC1	90	47.184	Ursus_maritimus
ENSOMEG00000000551	ythdc1	94	54.396	ENSVPAG00000009040	YTHDC1	56	61.765	Vicugna_pacos
ENSOMEG00000000551	ythdc1	61	64.679	ENSVVUG00000005387	YTHDC1	61	61.149	Vulpes_vulpes
ENSOMEG00000000551	ythdc1	94	57.846	ENSXETG00000017960	ythdc1	92	55.778	Xenopus_tropicalis
ENSOMEG00000000551	ythdc1	54	72.816	ENSXCOG00000000530	ythdc1	81	72.115	Xiphophorus_couchianus
ENSOMEG00000000551	ythdc1	95	76.138	ENSXMAG00000005196	ythdc1	94	75.824	Xiphophorus_maculatus