EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000000628 (Gene tree)
Gene ID: 112148547
Gene Symbol: srsf5a
Alias: -
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3131 bases
Position: chrNVQA01000001.1:1039559-1042689
Accession: 112148547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035784	RRM_1	PF00076.22	4e-33	1	2
ENSOMEP00000035784	RRM_1	PF00076.22	4e-33	2	2
ENSOMEP00000035784	RRM_3	PF08777.11	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000036549	-	816	-	ENSOMEP00000035784	271 (aa)	XP_024131516	UPI000CF7C068

Gene Model

Click here to download ENSOMEG00000000628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000000628	srsf5a	93	36.576	ENSOMEG00000017711	-	67	46.243
ENSOMEG00000000628	srsf5a	67	54.396	ENSOMEG00000006001	srsf6a	55	52.830
ENSOMEG00000000628	srsf5a	59	43.114	ENSOMEG00000004106	srsf1a	64	44.311
ENSOMEG00000000628	srsf5a	66	41.885	ENSOMEG00000002601	srsf9	74	42.408
ENSOMEG00000000628	srsf5a	65	63.842	ENSOMEG00000005541	srsf4	50	64.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000628	srsf5a	100	79.392	ENSAPOG00000017395	srsf5a	78	77.056	Acanthochromis_polyacanthus
ENSOMEG00000000628	srsf5a	84	80.172	ENSACIG00000011892	srsf5a	96	82.090	Amphilophus_citrinellus
ENSOMEG00000000628	srsf5a	83	83.404	ENSAOCG00000014967	srsf5a	80	76.068	Amphiprion_ocellaris
ENSOMEG00000000628	srsf5a	83	83.404	ENSAPEG00000009297	srsf5a	80	76.068	Amphiprion_percula
ENSOMEG00000000628	srsf5a	92	84.291	ENSATEG00000000198	srsf5a	82	83.761	Anabas_testudineus
ENSOMEG00000000628	srsf5a	66	78.022	ENSAPLG00000002469	-	70	76.923	Anas_platyrhynchos
ENSOMEG00000000628	srsf5a	66	77.778	ENSACAG00000029015	-	68	77.901	Anolis_carolinensis
ENSOMEG00000000628	srsf5a	83	84.519	ENSACLG00000027166	srsf5a	80	85.294	Astatotilapia_calliptera
ENSOMEG00000000628	srsf5a	66	87.027	ENSAMXG00000030476	srsf5a	67	86.486	Astyanax_mexicanus
ENSOMEG00000000628	srsf5a	66	80.110	ENSCPBG00000021518	-	70	79.006	Chrysemys_picta_bellii
ENSOMEG00000000628	srsf5a	66	56.633	ENSCSAVG00000011376	-	78	56.122	Ciona_savignyi
ENSOMEG00000000628	srsf5a	84	84.362	ENSCSEG00000008109	srsf5a	77	74.167	Cynoglossus_semilaevis
ENSOMEG00000000628	srsf5a	83	81.557	ENSCVAG00000016982	srsf5a	97	79.104	Cyprinodon_variegatus
ENSOMEG00000000628	srsf5a	68	86.702	ENSDARG00000029818	srsf5a	100	84.211	Danio_rerio
ENSOMEG00000000628	srsf5a	66	80.829	ENSELUG00000020439	srsf5a	62	81.865	Esox_lucius
ENSOMEG00000000628	srsf5a	66	77.778	ENSFALG00000005098	-	64	77.222	Ficedula_albicollis
ENSOMEG00000000628	srsf5a	85	79.845	ENSFHEG00000003955	srsf5a	97	75.172	Fundulus_heteroclitus
ENSOMEG00000000628	srsf5a	66	87.222	ENSGMOG00000000869	srsf5a	94	86.667	Gadus_morhua
ENSOMEG00000000628	srsf5a	66	78.333	ENSGALG00000033259	SRSF5A	63	77.222	Gallus_gallus
ENSOMEG00000000628	srsf5a	85	75.000	ENSGAFG00000018237	srsf5a	54	77.778	Gambusia_affinis
ENSOMEG00000000628	srsf5a	66	91.667	ENSGACG00000011761	srsf5a	70	91.667	Gasterosteus_aculeatus
ENSOMEG00000000628	srsf5a	66	80.110	ENSGAGG00000007312	-	70	79.006	Gopherus_agassizii
ENSOMEG00000000628	srsf5a	83	84.874	ENSHBUG00000014048	srsf5a	80	85.654	Haplochromis_burtoni
ENSOMEG00000000628	srsf5a	66	87.634	ENSHCOG00000017557	srsf5a	62	87.634	Hippocampus_comes
ENSOMEG00000000628	srsf5a	66	84.737	ENSIPUG00000003439	srsf5a	69	83.158	Ictalurus_punctatus
ENSOMEG00000000628	srsf5a	83	83.691	ENSKMAG00000014937	srsf5a	71	83.051	Kryptolebias_marmoratus
ENSOMEG00000000628	srsf5a	66	83.590	ENSLBEG00000017153	srsf5a	74	83.590	Labrus_bergylta
ENSOMEG00000000628	srsf5a	66	81.111	ENSLACG00000017874	-	70	81.111	Latimeria_chalumnae
ENSOMEG00000000628	srsf5a	66	85.946	ENSLOCG00000014075	srsf5a	81	77.459	Lepisosteus_oculatus
ENSOMEG00000000628	srsf5a	100	86.429	ENSMAMG00000000192	srsf5a	82	86.283	Mastacembelus_armatus
ENSOMEG00000000628	srsf5a	83	84.874	ENSMZEG00005010485	srsf5a	80	85.654	Maylandia_zebra
ENSOMEG00000000628	srsf5a	70	77.487	ENSMGAG00000011888	-	96	77.160	Meleagris_gallopavo
ENSOMEG00000000628	srsf5a	100	80.952	ENSMMOG00000009793	srsf5a	77	88.106	Mola_mola
ENSOMEG00000000628	srsf5a	100	72.598	ENSMALG00000021194	srsf5a	79	83.482	Monopterus_albus
ENSOMEG00000000628	srsf5a	83	85.232	ENSNBRG00000000771	srsf5a	80	86.017	Neolamprologus_brichardi
ENSOMEG00000000628	srsf5a	83	85.232	ENSONIG00000019583	srsf5a	80	86.017	Oreochromis_niloticus
ENSOMEG00000000628	srsf5a	100	97.059	ENSORLG00000009268	srsf5a	100	97.059	Oryzias_latipes
ENSOMEG00000000628	srsf5a	100	97.059	ENSORLG00020003281	srsf5	100	97.059	Oryzias_latipes_hni
ENSOMEG00000000628	srsf5a	100	97.059	ENSORLG00015023075	srsf5	100	97.059	Oryzias_latipes_hsok
ENSOMEG00000000628	srsf5a	66	86.559	ENSPKIG00000002054	srsf5a	68	85.484	Paramormyrops_kingsleyae
ENSOMEG00000000628	srsf5a	66	79.558	ENSPSIG00000008238	-	69	75.138	Pelodiscus_sinensis
ENSOMEG00000000628	srsf5a	85	64.082	ENSPMGG00000020125	srsf5a	72	64.854	Periophthalmus_magnuspinnatus
ENSOMEG00000000628	srsf5a	85	81.176	ENSPFOG00000022993	srsf5a	78	81.526	Poecilia_formosa
ENSOMEG00000000628	srsf5a	85	81.102	ENSPLAG00000005508	srsf5a	77	81.452	Poecilia_latipinna
ENSOMEG00000000628	srsf5a	85	81.569	ENSPMEG00000016339	srsf5a	78	81.928	Poecilia_mexicana
ENSOMEG00000000628	srsf5a	85	80.859	ENSPREG00000018091	srsf5a	79	81.600	Poecilia_reticulata
ENSOMEG00000000628	srsf5a	83	84.874	ENSPNYG00000021245	srsf5a	80	85.654	Pundamilia_nyererei
ENSOMEG00000000628	srsf5a	66	86.957	ENSPNAG00000021333	srsf5a	66	86.413	Pygocentrus_nattereri
ENSOMEG00000000628	srsf5a	66	86.559	ENSSFOG00015008377	srsf5	86	77.778	Scleropages_formosus
ENSOMEG00000000628	srsf5a	100	77.705	ENSSMAG00000010899	srsf5a	83	78.571	Scophthalmus_maximus
ENSOMEG00000000628	srsf5a	92	82.443	ENSSDUG00000006103	srsf5a	80	76.419	Seriola_dumerili
ENSOMEG00000000628	srsf5a	100	82.069	ENSSLDG00000004146	srsf5a	79	76.856	Seriola_lalandi_dorsalis
ENSOMEG00000000628	srsf5a	66	75.000	ENSSPUG00000002052	-	68	75.138	Sphenodon_punctatus
ENSOMEG00000000628	srsf5a	83	84.483	ENSSPAG00000002821	srsf5a	80	83.478	Stegastes_partitus
ENSOMEG00000000628	srsf5a	66	78.333	ENSTGUG00000011492	-	68	77.222	Taeniopygia_guttata
ENSOMEG00000000628	srsf5a	83	82.158	ENSTRUG00000022908	srsf5a	81	72.385	Takifugu_rubripes
ENSOMEG00000000628	srsf5a	69	75.897	ENSXETG00000017937	srsf5a	72	77.128	Xenopus_tropicalis
ENSOMEG00000000628	srsf5a	85	81.967	ENSXCOG00000015338	srsf5a	61	80.412	Xiphophorus_couchianus
ENSOMEG00000000628	srsf5a	85	81.176	ENSXMAG00000012823	srsf5a	79	78.656	Xiphophorus_maculatus