EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000000670 (Gene tree)
Gene ID: 112155720
Gene Symbol: ppargc1a
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator 1 alpha
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 53931 bases
Position: chrNVQA01000020.1:14599936-14653866
Accession: ZDB-GENE-080505-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004975	RRM_1	PF00076.22	2.1e-07	1	1
ENSOMEP00000004992	RRM_1	PF00076.22	2.5e-07	1	1
ENSOMEP00000005014	RRM_1	PF00076.22	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008223	-	6059	-	ENSOMEP00000004992	909 (aa)	-	-
ENSOMET00000008263	-	2334	-	ENSOMEP00000004975	777 (aa)	-	-
ENSOMET00000008194	-	6543	-	ENSOMEP00000005014	929 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000000670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000670's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000670	ppargc1a	91	81.098	ENSG00000109819	PPARGC1A	96	69.863	Homo_sapiens
ENSOMEG00000000670	ppargc1a	100	96.761	ENSAPOG00000018632	ppargc1a	97	96.735	Acanthochromis_polyacanthus
ENSOMEG00000000670	ppargc1a	95	81.098	ENSAMEG00000010421	PPARGC1A	69	81.212	Ailuropoda_melanoleuca
ENSOMEG00000000670	ppargc1a	100	80.076	ENSACIG00000009732	ppargc1a	100	81.211	Amphilophus_citrinellus
ENSOMEG00000000670	ppargc1a	100	96.761	ENSAOCG00000006754	ppargc1a	99	96.735	Amphiprion_ocellaris
ENSOMEG00000000670	ppargc1a	100	83.863	ENSAPEG00000022574	ppargc1a	97	96.735	Amphiprion_percula
ENSOMEG00000000670	ppargc1a	100	83.774	ENSATEG00000016702	ppargc1a	100	83.522	Anabas_testudineus
ENSOMEG00000000670	ppargc1a	91	81.818	ENSAPLG00000005303	PPARGC1A	69	81.818	Anas_platyrhynchos
ENSOMEG00000000670	ppargc1a	100	53.983	ENSACAG00000000741	PPARGC1A	69	80.606	Anolis_carolinensis
ENSOMEG00000000670	ppargc1a	100	54.621	ENSANAG00000035930	PPARGC1A	88	77.487	Aotus_nancymaae
ENSOMEG00000000670	ppargc1a	98	94.909	ENSACLG00000001002	ppargc1a	100	83.995	Astatotilapia_calliptera
ENSOMEG00000000670	ppargc1a	93	93.443	ENSAMXG00000002461	ppargc1a	89	89.091	Astyanax_mexicanus
ENSOMEG00000000670	ppargc1a	91	80.000	ENSBTAG00000017024	PPARGC1A	67	45.821	Bos_taurus
ENSOMEG00000000670	ppargc1a	100	54.028	ENSCJAG00000013024	PPARGC1A	69	81.212	Callithrix_jacchus
ENSOMEG00000000670	ppargc1a	100	52.151	ENSCAFG00000016519	PPARGC1A	69	81.212	Canis_familiaris
ENSOMEG00000000670	ppargc1a	99	52.604	ENSCAFG00020027242	PPARGC1A	71	78.947	Canis_lupus_dingo
ENSOMEG00000000670	ppargc1a	91	81.098	ENSTSYG00000010439	PPARGC1A	69	81.212	Carlito_syrichta
ENSOMEG00000000670	ppargc1a	90	80.488	ENSCAPG00000005150	PPARGC1A	65	77.083	Cavia_aperea
ENSOMEG00000000670	ppargc1a	93	80.488	ENSCPOG00000001518	PPARGC1A	69	80.606	Cavia_porcellus
ENSOMEG00000000670	ppargc1a	100	51.435	ENSCCAG00000024681	PPARGC1A	88	81.212	Cebus_capucinus
ENSOMEG00000000670	ppargc1a	91	81.098	ENSCATG00000032575	PPARGC1A	88	81.212	Cercocebus_atys
ENSOMEG00000000670	ppargc1a	100	54.038	ENSCLAG00000002058	PPARGC1A	69	80.000	Chinchilla_lanigera
ENSOMEG00000000670	ppargc1a	91	81.098	ENSCSAG00000016575	PPARGC1A	88	81.212	Chlorocebus_sabaeus
ENSOMEG00000000670	ppargc1a	100	53.389	ENSCANG00000033426	PPARGC1A	69	81.212	Colobus_angolensis_palliatus
ENSOMEG00000000670	ppargc1a	91	79.878	ENSCGRG00001015534	Ppargc1a	88	80.000	Cricetulus_griseus_chok1gshd
ENSOMEG00000000670	ppargc1a	91	79.878	ENSCGRG00000000200	Ppargc1a	88	80.000	Cricetulus_griseus_crigri
ENSOMEG00000000670	ppargc1a	93	94.758	ENSCSEG00000006884	ppargc1a	87	94.758	Cynoglossus_semilaevis
ENSOMEG00000000670	ppargc1a	100	71.580	ENSCVAG00000016547	ppargc1a	100	70.501	Cyprinodon_variegatus
ENSOMEG00000000670	ppargc1a	93	84.916	ENSDARG00000067829	ppargc1a	88	89.157	Danio_rerio
ENSOMEG00000000670	ppargc1a	100	54.255	ENSDNOG00000041106	PPARGC1A	84	81.212	Dasypus_novemcinctus
ENSOMEG00000000670	ppargc1a	67	79.268	ENSDORG00000016276	Ppargc1a	71	76.842	Dipodomys_ordii
ENSOMEG00000000670	ppargc1a	91	81.098	ENSEASG00005007984	PPARGC1A	69	81.212	Equus_asinus_asinus
ENSOMEG00000000670	ppargc1a	91	81.098	ENSECAG00000009164	PPARGC1A	70	78.421	Equus_caballus
ENSOMEG00000000670	ppargc1a	99	50.269	ENSEEUG00000009219	PPARGC1A	69	80.606	Erinaceus_europaeus
ENSOMEG00000000670	ppargc1a	92	90.171	ENSELUG00000017027	ppargc1a	100	64.853	Esox_lucius
ENSOMEG00000000670	ppargc1a	99	56.349	ENSFCAG00000000043	PPARGC1A	69	81.212	Felis_catus
ENSOMEG00000000670	ppargc1a	99	50.853	ENSFALG00000009211	PPARGC1A	68	81.818	Ficedula_albicollis
ENSOMEG00000000670	ppargc1a	91	78.659	ENSFDAG00000005659	PPARGC1A	69	78.788	Fukomys_damarensis
ENSOMEG00000000670	ppargc1a	100	94.606	ENSFHEG00000021990	ppargc1a	97	93.878	Fundulus_heteroclitus
ENSOMEG00000000670	ppargc1a	100	54.102	ENSGALG00000042851	PPARGC1A	72	78.947	Gallus_gallus
ENSOMEG00000000670	ppargc1a	100	94.191	ENSGAFG00000015514	ppargc1a	99	93.469	Gambusia_affinis
ENSOMEG00000000670	ppargc1a	99	53.333	ENSGAGG00000007043	PPARGC1A	69	81.212	Gopherus_agassizii
ENSOMEG00000000670	ppargc1a	91	81.098	ENSGGOG00000009810	PPARGC1A	69	81.212	Gorilla_gorilla
ENSOMEG00000000670	ppargc1a	100	95.142	ENSHBUG00000005269	ppargc1a	99	96.923	Haplochromis_burtoni
ENSOMEG00000000670	ppargc1a	91	78.659	ENSHGLG00000007022	PPARGC1A	69	78.788	Heterocephalus_glaber_female
ENSOMEG00000000670	ppargc1a	59	52.128	ENSHGLG00000005967	PPARGC1B	53	50.360	Heterocephalus_glaber_female
ENSOMEG00000000670	ppargc1a	91	78.659	ENSHGLG00100000133	PPARGC1A	69	78.788	Heterocephalus_glaber_male
ENSOMEG00000000670	ppargc1a	99	91.093	ENSHCOG00000014886	ppargc1a	93	89.759	Hippocampus_comes
ENSOMEG00000000670	ppargc1a	92	94.737	ENSIPUG00000020313	ppargc1a	60	94.737	Ictalurus_punctatus
ENSOMEG00000000670	ppargc1a	91	79.878	ENSSTOG00000012522	PPARGC1A	69	80.000	Ictidomys_tridecemlineatus
ENSOMEG00000000670	ppargc1a	99	82.062	ENSKMAG00000005390	ppargc1a	100	80.500	Kryptolebias_marmoratus
ENSOMEG00000000670	ppargc1a	98	95.851	ENSLBEG00000019562	ppargc1a	99	95.102	Labrus_bergylta
ENSOMEG00000000670	ppargc1a	92	84.795	ENSLACG00000014054	PPARGC1A	69	86.061	Latimeria_chalumnae
ENSOMEG00000000670	ppargc1a	65	45.113	ENSLOCG00000012195	ppargc1b	52	45.113	Lepisosteus_oculatus
ENSOMEG00000000670	ppargc1a	73	56.418	ENSLOCG00000012350	ppargc1a	67	56.866	Lepisosteus_oculatus
ENSOMEG00000000670	ppargc1a	100	53.964	ENSLAFG00000012981	PPARGC1A	65	80.606	Loxodonta_africana
ENSOMEG00000000670	ppargc1a	91	81.098	ENSMFAG00000000534	PPARGC1A	88	81.212	Macaca_fascicularis
ENSOMEG00000000670	ppargc1a	91	81.098	ENSMMUG00000001844	PPARGC1A	88	81.212	Macaca_mulatta
ENSOMEG00000000670	ppargc1a	91	81.098	ENSMNEG00000028682	PPARGC1A	88	81.212	Macaca_nemestrina
ENSOMEG00000000670	ppargc1a	91	81.098	ENSMLEG00000034233	PPARGC1A	88	81.212	Mandrillus_leucophaeus
ENSOMEG00000000670	ppargc1a	98	95.935	ENSMAMG00000005531	ppargc1a	92	95.547	Mastacembelus_armatus
ENSOMEG00000000670	ppargc1a	100	95.142	ENSMZEG00005001739	ppargc1a	69	95.565	Maylandia_zebra
ENSOMEG00000000670	ppargc1a	95	82.424	ENSMGAG00000012485	PPARGC1A	69	82.424	Meleagris_gallopavo
ENSOMEG00000000670	ppargc1a	91	79.268	ENSMAUG00000011811	Ppargc1a	88	79.394	Mesocricetus_auratus
ENSOMEG00000000670	ppargc1a	91	81.098	ENSMICG00000015390	PPARGC1A	84	81.212	Microcebus_murinus
ENSOMEG00000000670	ppargc1a	91	79.268	ENSMOCG00000008765	Ppargc1a	88	79.394	Microtus_ochrogaster
ENSOMEG00000000670	ppargc1a	99	94.355	ENSMMOG00000011847	ppargc1a	98	95.152	Mola_mola
ENSOMEG00000000670	ppargc1a	95	81.098	ENSMODG00000000549	PPARGC1A	64	81.212	Monodelphis_domestica
ENSOMEG00000000670	ppargc1a	100	94.332	ENSMALG00000004625	ppargc1a	89	94.715	Monopterus_albus
ENSOMEG00000000670	ppargc1a	91	77.439	MGP_CAROLIEiJ_G0027213	Ppargc1a	88	77.576	Mus_caroli
ENSOMEG00000000670	ppargc1a	91	77.439	ENSMUSG00000029167	Ppargc1a	88	77.576	Mus_musculus
ENSOMEG00000000670	ppargc1a	91	77.439	MGP_PahariEiJ_G0016995	Ppargc1a	88	77.576	Mus_pahari
ENSOMEG00000000670	ppargc1a	91	76.829	MGP_SPRETEiJ_G0028208	Ppargc1a	69	76.970	Mus_spretus
ENSOMEG00000000670	ppargc1a	95	81.098	ENSMPUG00000016736	PPARGC1A	88	81.212	Mustela_putorius_furo
ENSOMEG00000000670	ppargc1a	99	51.717	ENSMLUG00000016307	PPARGC1A	69	81.212	Myotis_lucifugus
ENSOMEG00000000670	ppargc1a	91	79.268	ENSNGAG00000015090	Ppargc1a	66	79.394	Nannospalax_galili
ENSOMEG00000000670	ppargc1a	100	84.813	ENSNBRG00000023403	ppargc1a	100	84.813	Neolamprologus_brichardi
ENSOMEG00000000670	ppargc1a	79	81.098	ENSNLEG00000016760	PPARGC1A	69	80.625	Nomascus_leucogenys
ENSOMEG00000000670	ppargc1a	91	79.878	ENSOPRG00000012899	PPARGC1A	69	80.000	Ochotona_princeps
ENSOMEG00000000670	ppargc1a	99	74.162	ENSONIG00000007635	ppargc1a	100	71.831	Oreochromis_niloticus
ENSOMEG00000000670	ppargc1a	100	53.151	ENSOANG00000006680	PPARGC1A	69	82.424	Ornithorhynchus_anatinus
ENSOMEG00000000670	ppargc1a	91	80.488	ENSOCUG00000014668	PPARGC1A	50	80.606	Oryctolagus_cuniculus
ENSOMEG00000000670	ppargc1a	100	99.190	ENSORLG00000004788	ppargc1a	99	99.184	Oryzias_latipes
ENSOMEG00000000670	ppargc1a	100	99.190	ENSORLG00020014690	ppargc1a	100	90.506	Oryzias_latipes_hni
ENSOMEG00000000670	ppargc1a	100	98.785	ENSORLG00015012206	ppargc1a	99	100.000	Oryzias_latipes_hsok
ENSOMEG00000000670	ppargc1a	100	53.964	ENSOGAG00000014559	PPARGC1A	88	80.000	Otolemur_garnettii
ENSOMEG00000000670	ppargc1a	91	80.606	ENSOARG00000005581	PPARGC1A	67	80.606	Ovis_aries
ENSOMEG00000000670	ppargc1a	91	81.098	ENSPPAG00000034694	PPARGC1A	69	81.212	Pan_paniscus
ENSOMEG00000000670	ppargc1a	99	56.499	ENSPPRG00000001711	PPARGC1A	69	81.212	Panthera_pardus
ENSOMEG00000000670	ppargc1a	99	56.499	ENSPTIG00000007378	PPARGC1A	69	81.212	Panthera_tigris_altaica
ENSOMEG00000000670	ppargc1a	91	81.098	ENSPTRG00000015954	PPARGC1A	69	81.212	Pan_troglodytes
ENSOMEG00000000670	ppargc1a	91	81.098	ENSPANG00000005420	PPARGC1A	88	81.212	Papio_anubis
ENSOMEG00000000670	ppargc1a	92	77.473	ENSPKIG00000002531	ppargc1a	63	80.606	Paramormyrops_kingsleyae
ENSOMEG00000000670	ppargc1a	99	56.667	ENSPSIG00000011790	PPARGC1A	69	81.818	Pelodiscus_sinensis
ENSOMEG00000000670	ppargc1a	100	72.210	ENSPMGG00000019204	ppargc1a	100	72.319	Periophthalmus_magnuspinnatus
ENSOMEG00000000670	ppargc1a	100	50.477	ENSPEMG00000010892	Ppargc1a	88	78.916	Peromyscus_maniculatus_bairdii
ENSOMEG00000000670	ppargc1a	100	54.731	ENSPCIG00000015835	PPARGC1A	88	80.606	Phascolarctos_cinereus
ENSOMEG00000000670	ppargc1a	98	95.417	ENSPFOG00000001263	ppargc1a	98	81.760	Poecilia_formosa
ENSOMEG00000000670	ppargc1a	100	77.819	ENSPLAG00000002827	ppargc1a	94	95.082	Poecilia_latipinna
ENSOMEG00000000670	ppargc1a	100	95.417	ENSPMEG00000000720	ppargc1a	92	94.737	Poecilia_mexicana
ENSOMEG00000000670	ppargc1a	99	95.436	ENSPREG00000019171	ppargc1a	99	94.694	Poecilia_reticulata
ENSOMEG00000000670	ppargc1a	91	81.098	ENSPPYG00000014640	PPARGC1A	69	81.212	Pongo_abelii
ENSOMEG00000000670	ppargc1a	99	50.966	ENSPCAG00000016308	PPARGC1A	65	79.394	Procavia_capensis
ENSOMEG00000000670	ppargc1a	100	53.609	ENSPCOG00000022858	PPARGC1A	88	81.212	Propithecus_coquereli
ENSOMEG00000000670	ppargc1a	95	80.488	ENSPVAG00000004965	PPARGC1A	69	80.606	Pteropus_vampyrus
ENSOMEG00000000670	ppargc1a	100	95.547	ENSPNYG00000006846	ppargc1a	100	84.942	Pundamilia_nyererei
ENSOMEG00000000670	ppargc1a	93	93.443	ENSPNAG00000010393	ppargc1a	78	89.759	Pygocentrus_nattereri
ENSOMEG00000000670	ppargc1a	91	78.049	ENSRNOG00000004473	Ppargc1a	69	78.182	Rattus_norvegicus
ENSOMEG00000000670	ppargc1a	91	81.098	ENSRBIG00000032333	PPARGC1A	69	81.212	Rhinopithecus_bieti
ENSOMEG00000000670	ppargc1a	91	81.098	ENSRROG00000010419	PPARGC1A	69	81.212	Rhinopithecus_roxellana
ENSOMEG00000000670	ppargc1a	99	56.919	ENSSBOG00000006423	PPARGC1A	69	81.212	Saimiri_boliviensis_boliviensis
ENSOMEG00000000670	ppargc1a	99	52.253	ENSSHAG00000010033	PPARGC1A	61	81.212	Sarcophilus_harrisii
ENSOMEG00000000670	ppargc1a	100	52.839	ENSSFOG00015018522	ppargc1a	90	73.292	Scleropages_formosus
ENSOMEG00000000670	ppargc1a	91	74.882	ENSSFOG00015001633	ppargc1a	78	74.762	Scleropages_formosus
ENSOMEG00000000670	ppargc1a	100	94.737	ENSSMAG00000011571	ppargc1a	87	95.161	Scophthalmus_maximus
ENSOMEG00000000670	ppargc1a	100	79.302	ENSSDUG00000007408	ppargc1a	97	97.835	Seriola_dumerili
ENSOMEG00000000670	ppargc1a	100	80.778	ENSSLDG00000006987	ppargc1a	100	80.432	Seriola_lalandi_dorsalis
ENSOMEG00000000670	ppargc1a	91	80.000	ENSSARG00000000575	PPARGC1A	83	80.000	Sorex_araneus
ENSOMEG00000000670	ppargc1a	93	58.022	ENSSPUG00000013556	PPARGC1A	69	82.424	Sphenodon_punctatus
ENSOMEG00000000670	ppargc1a	98	95.319	ENSSPAG00000023514	ppargc1a	100	85.157	Stegastes_partitus
ENSOMEG00000000670	ppargc1a	95	81.098	ENSSSCG00000029275	PPARGC1A	72	78.421	Sus_scrofa
ENSOMEG00000000670	ppargc1a	100	50.159	ENSTGUG00000009487	PPARGC1A	69	81.818	Taeniopygia_guttata
ENSOMEG00000000670	ppargc1a	89	91.329	ENSTRUG00000007210	ppargc1a	93	73.756	Takifugu_rubripes
ENSOMEG00000000670	ppargc1a	99	53.906	ENSTTRG00000005327	PPARGC1A	66	81.212	Tursiops_truncatus
ENSOMEG00000000670	ppargc1a	89	80.368	ENSUAMG00000020843	PPARGC1A	68	78.307	Ursus_americanus
ENSOMEG00000000670	ppargc1a	93	81.098	ENSUMAG00000003557	PPARGC1A	72	78.947	Ursus_maritimus
ENSOMEG00000000670	ppargc1a	86	80.606	ENSVPAG00000003478	PPARGC1A	69	80.606	Vicugna_pacos
ENSOMEG00000000670	ppargc1a	100	52.151	ENSVVUG00000013365	PPARGC1A	69	81.212	Vulpes_vulpes
ENSOMEG00000000670	ppargc1a	100	52.738	ENSXETG00000020468	ppargc1a	86	78.182	Xenopus_tropicalis
ENSOMEG00000000670	ppargc1a	98	95.000	ENSXCOG00000004835	ppargc1a	100	78.867	Xiphophorus_couchianus
ENSOMEG00000000670	ppargc1a	100	94.583	ENSXMAG00000007748	ppargc1a	69	93.952	Xiphophorus_maculatus