EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000000940 (Gene tree)
Gene ID: 112143926
Gene Symbol: prpf3
Alias: -
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8799 bases
Position: chrNVQA01000006.1:7600736-7609534
Accession: 112143926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026789	PRP3	PF08572.10	1.1e-76	1	1
ENSOMEP00000026812	PRP3	PF08572.10	1.3e-76	1	1
ENSOMEP00000026789	PWI	PF01480.17	6.7e-12	1	1
ENSOMEP00000026812	PWI	PF01480.17	7.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000003568	-	2903	-	ENSOMEP00000026812	694 (aa)	XP_024123939	UPI000CF7D94D
ENSOMET00000003634	-	1905	-	ENSOMEP00000026789	634 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000000940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000000940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000000940	prpf3	99	71.777	ENSG00000117360	PRPF3	100	72.063	Homo_sapiens
ENSOMEG00000000940	prpf3	100	86.838	ENSAPOG00000015584	prpf3	100	87.411	Acanthochromis_polyacanthus
ENSOMEG00000000940	prpf3	99	71.920	ENSAMEG00000001630	PRPF3	100	72.206	Ailuropoda_melanoleuca
ENSOMEG00000000940	prpf3	100	86.080	ENSACIG00000007876	prpf3	100	86.364	Amphilophus_citrinellus
ENSOMEG00000000940	prpf3	100	86.533	ENSAOCG00000011449	prpf3	100	87.393	Amphiprion_ocellaris
ENSOMEG00000000940	prpf3	100	88.109	ENSATEG00000023583	prpf3	100	88.109	Anabas_testudineus
ENSOMEG00000000940	prpf3	99	73.209	ENSAPLG00000002440	PRPF3	100	73.066	Anas_platyrhynchos
ENSOMEG00000000940	prpf3	99	72.199	ENSACAG00000003176	PRPF3	100	72.624	Anolis_carolinensis
ENSOMEG00000000940	prpf3	99	71.777	ENSANAG00000026138	PRPF3	100	72.063	Aotus_nancymaae
ENSOMEG00000000940	prpf3	100	86.409	ENSACLG00000020127	prpf3	100	86.409	Astatotilapia_calliptera
ENSOMEG00000000940	prpf3	100	79.916	ENSAMXG00000007306	prpf3	100	79.412	Astyanax_mexicanus
ENSOMEG00000000940	prpf3	99	71.777	ENSBTAG00000013946	PRPF3	100	72.063	Bos_taurus
ENSOMEG00000000940	prpf3	86	39.964	WBGene00010844	prp-3	96	36.123	Caenorhabditis_elegans
ENSOMEG00000000940	prpf3	99	71.777	ENSCJAG00000009926	PRPF3	100	72.063	Callithrix_jacchus
ENSOMEG00000000940	prpf3	99	71.777	ENSCAFG00000011820	PRPF3	100	72.063	Canis_familiaris
ENSOMEG00000000940	prpf3	81	71.530	ENSCAFG00020019653	PRPF3	100	72.064	Canis_lupus_dingo
ENSOMEG00000000940	prpf3	99	71.777	ENSCHIG00000015434	PRPF3	100	72.063	Capra_hircus
ENSOMEG00000000940	prpf3	99	71.920	ENSTSYG00000001383	PRPF3	100	72.206	Carlito_syrichta
ENSOMEG00000000940	prpf3	92	64.309	ENSCAPG00000017812	PRPF3	95	64.145	Cavia_aperea
ENSOMEG00000000940	prpf3	99	71.777	ENSCPOG00000008068	PRPF3	100	72.063	Cavia_porcellus
ENSOMEG00000000940	prpf3	99	71.777	ENSCCAG00000026380	PRPF3	100	72.063	Cebus_capucinus
ENSOMEG00000000940	prpf3	99	59.033	ENSCATG00000041778	PRPF3	100	59.317	Cercocebus_atys
ENSOMEG00000000940	prpf3	99	71.920	ENSCLAG00000015009	PRPF3	100	72.206	Chinchilla_lanigera
ENSOMEG00000000940	prpf3	76	79.927	ENSCHOG00000011645	PRPF3	76	79.562	Choloepus_hoffmanni
ENSOMEG00000000940	prpf3	99	71.920	ENSCPBG00000008216	PRPF3	100	72.206	Chrysemys_picta_bellii
ENSOMEG00000000940	prpf3	65	58.273	ENSCING00000003312	-	99	58.273	Ciona_intestinalis
ENSOMEG00000000940	prpf3	85	53.125	ENSCSAVG00000008720	-	96	51.820	Ciona_savignyi
ENSOMEG00000000940	prpf3	99	71.203	ENSCANG00000036769	PRPF3	100	71.490	Colobus_angolensis_palliatus
ENSOMEG00000000940	prpf3	99	71.777	ENSCGRG00001019100	Prpf3	100	72.063	Cricetulus_griseus_chok1gshd
ENSOMEG00000000940	prpf3	99	71.777	ENSCGRG00000007322	Prpf3	100	72.063	Cricetulus_griseus_crigri
ENSOMEG00000000940	prpf3	100	86.250	ENSCSEG00000002532	prpf3	100	86.250	Cynoglossus_semilaevis
ENSOMEG00000000940	prpf3	100	88.235	ENSCVAG00000009318	prpf3	100	88.235	Cyprinodon_variegatus
ENSOMEG00000000940	prpf3	100	80.228	ENSDARG00000086425	prpf3	100	80.228	Danio_rerio
ENSOMEG00000000940	prpf3	99	73.488	ENSDNOG00000005904	PRPF3	100	73.333	Dasypus_novemcinctus
ENSOMEG00000000940	prpf3	93	71.649	ENSDORG00000008664	Prpf3	100	71.957	Dipodomys_ordii
ENSOMEG00000000940	prpf3	91	51.155	FBgn0036915	Prp3	99	53.047	Drosophila_melanogaster
ENSOMEG00000000940	prpf3	99	71.060	ENSETEG00000019124	PRPF3	100	71.347	Echinops_telfairi
ENSOMEG00000000940	prpf3	100	60.963	ENSEBUG00000011680	prpf3	100	61.497	Eptatretus_burgeri
ENSOMEG00000000940	prpf3	99	71.633	ENSEASG00005001566	PRPF3	100	71.920	Equus_asinus_asinus
ENSOMEG00000000940	prpf3	99	71.777	ENSECAG00000019840	PRPF3	100	72.063	Equus_caballus
ENSOMEG00000000940	prpf3	84	71.655	ENSEEUG00000007338	PRPF3	85	71.429	Erinaceus_europaeus
ENSOMEG00000000940	prpf3	100	74.432	ENSELUG00000013624	prpf3	100	74.646	Esox_lucius
ENSOMEG00000000940	prpf3	99	71.777	ENSFCAG00000013940	PRPF3	100	72.063	Felis_catus
ENSOMEG00000000940	prpf3	99	71.920	ENSFDAG00000010365	PRPF3	100	72.206	Fukomys_damarensis
ENSOMEG00000000940	prpf3	100	87.500	ENSFHEG00000021746	prpf3	100	87.500	Fundulus_heteroclitus
ENSOMEG00000000940	prpf3	100	81.650	ENSGMOG00000008535	prpf3	100	81.650	Gadus_morhua
ENSOMEG00000000940	prpf3	99	73.352	ENSGALG00000028205	PRPF3	100	73.209	Gallus_gallus
ENSOMEG00000000940	prpf3	100	87.356	ENSGAFG00000012671	prpf3	100	87.356	Gambusia_affinis
ENSOMEG00000000940	prpf3	100	85.328	ENSGACG00000011792	prpf3	100	85.328	Gasterosteus_aculeatus
ENSOMEG00000000940	prpf3	99	71.920	ENSGAGG00000013765	PRPF3	100	73.788	Gopherus_agassizii
ENSOMEG00000000940	prpf3	86	76.106	ENSGGOG00000013174	PRPF3	100	75.811	Gorilla_gorilla
ENSOMEG00000000940	prpf3	100	86.695	ENSHBUG00000003493	prpf3	100	86.695	Haplochromis_burtoni
ENSOMEG00000000940	prpf3	99	71.633	ENSHGLG00000016569	PRPF3	100	71.920	Heterocephalus_glaber_female
ENSOMEG00000000940	prpf3	99	51.885	ENSHGLG00000016033	-	96	65.455	Heterocephalus_glaber_female
ENSOMEG00000000940	prpf3	99	52.374	ENSHGLG00100008951	-	96	65.455	Heterocephalus_glaber_male
ENSOMEG00000000940	prpf3	99	71.633	ENSHGLG00100007590	PRPF3	100	71.920	Heterocephalus_glaber_male
ENSOMEG00000000940	prpf3	100	82.546	ENSHCOG00000014058	prpf3	100	82.976	Hippocampus_comes
ENSOMEG00000000940	prpf3	100	80.057	ENSIPUG00000000902	PRPF3	100	80.199	Ictalurus_punctatus
ENSOMEG00000000940	prpf3	99	71.777	ENSSTOG00000001889	PRPF3	100	72.063	Ictidomys_tridecemlineatus
ENSOMEG00000000940	prpf3	100	88.170	ENSKMAG00000001390	prpf3	100	88.013	Kryptolebias_marmoratus
ENSOMEG00000000940	prpf3	100	89.590	ENSLBEG00000026310	prpf3	100	89.590	Labrus_bergylta
ENSOMEG00000000940	prpf3	93	67.534	ENSLACG00000010541	PRPF3	100	67.381	Latimeria_chalumnae
ENSOMEG00000000940	prpf3	99	71.777	ENSLAFG00000004713	PRPF3	100	72.063	Loxodonta_africana
ENSOMEG00000000940	prpf3	99	71.777	ENSMFAG00000039791	PRPF3	100	72.063	Macaca_fascicularis
ENSOMEG00000000940	prpf3	90	72.276	ENSMMUG00000016301	PRPF3	97	72.756	Macaca_mulatta
ENSOMEG00000000940	prpf3	99	71.777	ENSMNEG00000038161	PRPF3	100	72.063	Macaca_nemestrina
ENSOMEG00000000940	prpf3	98	49.422	ENSMLEG00000041065	-	97	48.555	Mandrillus_leucophaeus
ENSOMEG00000000940	prpf3	86	76.106	ENSMLEG00000040609	PRPF3	100	75.811	Mandrillus_leucophaeus
ENSOMEG00000000940	prpf3	100	88.125	ENSMAMG00000014968	prpf3	100	88.125	Mastacembelus_armatus
ENSOMEG00000000940	prpf3	100	88.193	ENSMZEG00005015970	prpf3	100	88.193	Maylandia_zebra
ENSOMEG00000000940	prpf3	99	73.352	ENSMGAG00000000707	PRPF3	100	73.209	Meleagris_gallopavo
ENSOMEG00000000940	prpf3	99	71.633	ENSMAUG00000017112	Prpf3	100	72.063	Mesocricetus_auratus
ENSOMEG00000000940	prpf3	99	71.633	ENSMICG00000015386	PRPF3	100	73.514	Microcebus_murinus
ENSOMEG00000000940	prpf3	99	71.777	ENSMOCG00000000242	Prpf3	100	72.063	Microtus_ochrogaster
ENSOMEG00000000940	prpf3	100	80.536	ENSMMOG00000016131	prpf3	100	80.677	Mola_mola
ENSOMEG00000000940	prpf3	99	71.960	ENSMODG00000018774	PRPF3	100	72.246	Monodelphis_domestica
ENSOMEG00000000940	prpf3	100	84.165	ENSMALG00000007257	prpf3	100	84.165	Monopterus_albus
ENSOMEG00000000940	prpf3	99	71.490	MGP_CAROLIEiJ_G0025354	Prpf3	100	71.777	Mus_caroli
ENSOMEG00000000940	prpf3	99	71.490	ENSMUSG00000015748	Prpf3	100	71.777	Mus_musculus
ENSOMEG00000000940	prpf3	99	71.612	MGP_PahariEiJ_G0026798	Prpf3	100	71.897	Mus_pahari
ENSOMEG00000000940	prpf3	99	71.490	MGP_SPRETEiJ_G0026298	Prpf3	100	71.777	Mus_spretus
ENSOMEG00000000940	prpf3	99	70.344	ENSMPUG00000005080	PRPF3	100	70.630	Mustela_putorius_furo
ENSOMEG00000000940	prpf3	99	71.817	ENSMLUG00000004646	-	100	72.103	Myotis_lucifugus
ENSOMEG00000000940	prpf3	99	71.777	ENSNGAG00000000910	Prpf3	100	72.063	Nannospalax_galili
ENSOMEG00000000940	prpf3	100	87.060	ENSNBRG00000003462	prpf3	100	87.060	Neolamprologus_brichardi
ENSOMEG00000000940	prpf3	90	72.276	ENSNLEG00000009841	PRPF3	99	72.756	Nomascus_leucogenys
ENSOMEG00000000940	prpf3	83	64.583	ENSMEUG00000008733	PRPF3	89	65.833	Notamacropus_eugenii
ENSOMEG00000000940	prpf3	99	71.777	ENSOPRG00000010139	PRPF3	100	72.063	Ochotona_princeps
ENSOMEG00000000940	prpf3	99	54.184	ENSODEG00000014412	-	100	54.326	Octodon_degus
ENSOMEG00000000940	prpf3	99	71.633	ENSODEG00000011363	-	100	71.920	Octodon_degus
ENSOMEG00000000940	prpf3	100	88.336	ENSONIG00000006394	prpf3	100	88.336	Oreochromis_niloticus
ENSOMEG00000000940	prpf3	99	54.326	ENSOANG00000015441	PRPF3	100	54.326	Ornithorhynchus_anatinus
ENSOMEG00000000940	prpf3	99	71.777	ENSOCUG00000011760	PRPF3	100	72.063	Oryctolagus_cuniculus
ENSOMEG00000000940	prpf3	100	96.110	ENSORLG00000010330	prpf3	100	96.110	Oryzias_latipes
ENSOMEG00000000940	prpf3	100	96.254	ENSORLG00020009054	prpf3	100	96.254	Oryzias_latipes_hni
ENSOMEG00000000940	prpf3	100	96.110	ENSORLG00015015016	prpf3	100	96.110	Oryzias_latipes_hsok
ENSOMEG00000000940	prpf3	99	67.806	ENSOGAG00000005352	PRPF3	100	68.091	Otolemur_garnettii
ENSOMEG00000000940	prpf3	99	71.777	ENSOARG00000020798	PRPF3	100	72.063	Ovis_aries
ENSOMEG00000000940	prpf3	99	71.633	ENSPPAG00000030983	PRPF3	100	71.920	Pan_paniscus
ENSOMEG00000000940	prpf3	98	55.604	ENSPPAG00000043769	-	99	54.942	Pan_paniscus
ENSOMEG00000000940	prpf3	99	71.777	ENSPPRG00000000731	PRPF3	100	72.063	Panthera_pardus
ENSOMEG00000000940	prpf3	99	71.777	ENSPTIG00000005516	PRPF3	100	72.063	Panthera_tigris_altaica
ENSOMEG00000000940	prpf3	99	71.777	ENSPTRG00000001254	PRPF3	100	72.063	Pan_troglodytes
ENSOMEG00000000940	prpf3	98	54.731	ENSPTRG00000047819	-	99	54.070	Pan_troglodytes
ENSOMEG00000000940	prpf3	99	71.633	ENSPANG00000000499	PRPF3	100	71.920	Papio_anubis
ENSOMEG00000000940	prpf3	100	82.418	ENSPKIG00000010501	prpf3	100	82.104	Paramormyrops_kingsleyae
ENSOMEG00000000940	prpf3	99	72.675	ENSPSIG00000014877	PRPF3	100	72.675	Pelodiscus_sinensis
ENSOMEG00000000940	prpf3	100	82.732	ENSPMGG00000007776	prpf3	100	82.575	Periophthalmus_magnuspinnatus
ENSOMEG00000000940	prpf3	99	71.777	ENSPEMG00000011672	Prpf3	100	72.063	Peromyscus_maniculatus_bairdii
ENSOMEG00000000940	prpf3	68	70.023	ENSPMAG00000005588	prpf3	97	70.023	Petromyzon_marinus
ENSOMEG00000000940	prpf3	99	71.960	ENSPCIG00000008795	PRPF3	100	72.246	Phascolarctos_cinereus
ENSOMEG00000000940	prpf3	100	86.895	ENSPFOG00000013638	prpf3	100	87.179	Poecilia_formosa
ENSOMEG00000000940	prpf3	100	87.356	ENSPLAG00000018103	prpf3	100	87.644	Poecilia_latipinna
ENSOMEG00000000940	prpf3	100	87.213	ENSPMEG00000023546	prpf3	100	87.500	Poecilia_mexicana
ENSOMEG00000000940	prpf3	100	88.075	ENSPREG00000017216	prpf3	100	88.075	Poecilia_reticulata
ENSOMEG00000000940	prpf3	76	62.879	ENSPPYG00000018646	-	99	63.447	Pongo_abelii
ENSOMEG00000000940	prpf3	93	70.615	ENSPPYG00000000900	PRPF3	99	70.923	Pongo_abelii
ENSOMEG00000000940	prpf3	86	74.054	ENSPCAG00000014908	PRPF3	87	72.772	Procavia_capensis
ENSOMEG00000000940	prpf3	99	71.633	ENSPCOG00000013828	PRPF3	100	71.920	Propithecus_coquereli
ENSOMEG00000000940	prpf3	99	71.060	ENSPVAG00000013472	PRPF3	100	71.347	Pteropus_vampyrus
ENSOMEG00000000940	prpf3	100	87.201	ENSPNYG00000004279	prpf3	100	87.201	Pundamilia_nyererei
ENSOMEG00000000940	prpf3	100	83.333	ENSPNAG00000001799	prpf3	100	82.862	Pygocentrus_nattereri
ENSOMEG00000000940	prpf3	99	71.633	ENSRNOG00000025629	Prpf3	100	71.920	Rattus_norvegicus
ENSOMEG00000000940	prpf3	83	70.213	ENSRBIG00000028854	PRPF3	98	69.504	Rhinopithecus_bieti
ENSOMEG00000000940	prpf3	99	71.777	ENSRROG00000027464	PRPF3	100	72.063	Rhinopithecus_roxellana
ENSOMEG00000000940	prpf3	99	65.473	ENSSBOG00000033104	PRPF3	100	65.759	Saimiri_boliviensis_boliviensis
ENSOMEG00000000940	prpf3	99	71.857	ENSSHAG00000009548	PRPF3	100	72.143	Sarcophilus_harrisii
ENSOMEG00000000940	prpf3	100	83.359	ENSSFOG00015022014	prpf3	100	82.889	Scleropages_formosus
ENSOMEG00000000940	prpf3	100	87.324	ENSSMAG00000015739	prpf3	100	87.324	Scophthalmus_maximus
ENSOMEG00000000940	prpf3	100	83.429	ENSSDUG00000006840	prpf3	100	83.718	Seriola_dumerili
ENSOMEG00000000940	prpf3	100	85.795	ENSSLDG00000015423	prpf3	100	86.357	Seriola_lalandi_dorsalis
ENSOMEG00000000940	prpf3	99	71.920	ENSSARG00000011064	PRPF3	100	72.206	Sorex_araneus
ENSOMEG00000000940	prpf3	99	71.469	ENSSPUG00000000809	PRPF3	100	71.328	Sphenodon_punctatus
ENSOMEG00000000940	prpf3	100	88.328	ENSSPAG00000018721	prpf3	100	88.170	Stegastes_partitus
ENSOMEG00000000940	prpf3	99	71.777	ENSSSCG00000030119	PRPF3	100	73.694	Sus_scrofa
ENSOMEG00000000940	prpf3	99	62.447	ENSTGUG00000004552	PRPF3	100	62.304	Taeniopygia_guttata
ENSOMEG00000000940	prpf3	100	83.190	ENSTRUG00000014923	prpf3	100	83.070	Takifugu_rubripes
ENSOMEG00000000940	prpf3	99	83.949	ENSTNIG00000008058	prpf3	100	83.665	Tetraodon_nigroviridis
ENSOMEG00000000940	prpf3	81	70.975	ENSTBEG00000014072	PRPF3	88	72.109	Tupaia_belangeri
ENSOMEG00000000940	prpf3	99	67.049	ENSTTRG00000010616	PRPF3	100	67.335	Tursiops_truncatus
ENSOMEG00000000940	prpf3	86	73.694	ENSUAMG00000009345	PRPF3	100	73.694	Ursus_americanus
ENSOMEG00000000940	prpf3	99	71.777	ENSUMAG00000003720	PRPF3	100	72.063	Ursus_maritimus
ENSOMEG00000000940	prpf3	88	76.190	ENSVPAG00000005425	PRPF3	89	75.964	Vicugna_pacos
ENSOMEG00000000940	prpf3	99	73.406	ENSVVUG00000007933	PRPF3	100	73.250	Vulpes_vulpes
ENSOMEG00000000940	prpf3	99	69.986	ENSXETG00000018654	prpf3	100	70.555	Xenopus_tropicalis
ENSOMEG00000000940	prpf3	100	87.539	ENSXMAG00000016347	prpf3	100	87.787	Xiphophorus_maculatus