EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000001001 (Gene tree)
Gene ID: 112155918
Gene Symbol: rbm4.1
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4825 bases
Position: chrNVQA01000020.1:611549-616373
Accession: 112155918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004281	zf-CCHC	PF00098.23	5.5e-08	1	1
ENSOMEP00000004281	RRM_5	PF13893.6	5.4e-07	1	1
ENSOMEP00000004281	RRM_1	PF00076.22	2.2e-30	1	2
ENSOMEP00000004281	RRM_1	PF00076.22	2.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000009422	-	2221	XM_024287960	ENSOMEP00000004281	417 (aa)	XP_024143728	UPI000CF7D63E

Gene Model

Click here to download ENSOMEG00000001001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000001001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000001001	rbm4.1	59	53.378	ENSOMEG00000005918	rbm4.3	81	53.378
ENSOMEG00000001001	rbm4.1	59	52.349	ENSOMEG00000005929	rbm4.3	80	51.656
ENSOMEG00000001001	rbm4.1	60	54.248	ENSOMEG00000005950	rbm4.3	91	54.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000001001	rbm4.1	100	80.285	ENSAPOG00000012353	rbm4.1	100	80.285	Acanthochromis_polyacanthus
ENSOMEG00000001001	rbm4.1	100	79.810	ENSACIG00000016482	rbm4.1	100	79.810	Amphilophus_citrinellus
ENSOMEG00000001001	rbm4.1	100	80.760	ENSAOCG00000010915	rbm4.1	100	80.760	Amphiprion_ocellaris
ENSOMEG00000001001	rbm4.1	100	80.760	ENSAPEG00000009494	rbm4.1	100	80.760	Amphiprion_percula
ENSOMEG00000001001	rbm4.1	100	79.097	ENSATEG00000001904	rbm4.1	100	79.097	Anabas_testudineus
ENSOMEG00000001001	rbm4.1	100	79.810	ENSACLG00000007722	rbm4.1	100	79.810	Astatotilapia_calliptera
ENSOMEG00000001001	rbm4.1	99	46.890	ENSACLG00000007740	-	99	46.905	Astatotilapia_calliptera
ENSOMEG00000001001	rbm4.1	100	62.143	ENSAMXG00000036611	rbm4.1	100	61.137	Astyanax_mexicanus
ENSOMEG00000001001	rbm4.1	100	69.286	ENSCSEG00000014365	rbm4.1	100	69.286	Cynoglossus_semilaevis
ENSOMEG00000001001	rbm4.1	95	49.380	ENSCSEG00000014359	-	95	49.750	Cynoglossus_semilaevis
ENSOMEG00000001001	rbm4.1	100	78.230	ENSCVAG00000019349	rbm4.1	100	78.230	Cyprinodon_variegatus
ENSOMEG00000001001	rbm4.1	100	66.589	ENSDARG00000036386	rbm4.1	100	66.589	Danio_rerio
ENSOMEG00000001001	rbm4.1	100	49.526	ENSDARG00000055080	rbm4.2	100	50.472	Danio_rerio
ENSOMEG00000001001	rbm4.1	100	61.538	ENSELUG00000013205	rbm4.1	100	60.277	Esox_lucius
ENSOMEG00000001001	rbm4.1	100	77.804	ENSFHEG00000022926	rbm4.1	100	77.804	Fundulus_heteroclitus
ENSOMEG00000001001	rbm4.1	92	48.985	ENSGMOG00000007455	-	99	49.763	Gadus_morhua
ENSOMEG00000001001	rbm4.1	100	64.846	ENSGMOG00000007464	rbm4.1	100	66.033	Gadus_morhua
ENSOMEG00000001001	rbm4.1	100	75.952	ENSGAFG00000019302	rbm4.1	100	75.952	Gambusia_affinis
ENSOMEG00000001001	rbm4.1	99	89.840	ENSGACG00000000822	rbm4.1	100	89.840	Gasterosteus_aculeatus
ENSOMEG00000001001	rbm4.1	90	49.072	ENSGACG00000000821	-	90	50.133	Gasterosteus_aculeatus
ENSOMEG00000001001	rbm4.1	100	79.810	ENSHBUG00000011610	rbm4.1	100	79.810	Haplochromis_burtoni
ENSOMEG00000001001	rbm4.1	92	68.462	ENSHCOG00000011403	rbm4.1	95	68.462	Hippocampus_comes
ENSOMEG00000001001	rbm4.1	100	58.810	ENSIPUG00000022931	rbm4.1	100	59.361	Ictalurus_punctatus
ENSOMEG00000001001	rbm4.1	100	48.341	ENSIPUG00000022937	rbm4.2	100	48.700	Ictalurus_punctatus
ENSOMEG00000001001	rbm4.1	100	75.714	ENSKMAG00000006556	rbm4.1	100	75.714	Kryptolebias_marmoratus
ENSOMEG00000001001	rbm4.1	100	78.385	ENSLBEG00000019782	rbm4.1	100	78.385	Labrus_bergylta
ENSOMEG00000001001	rbm4.1	99	46.778	ENSLBEG00000019756	-	90	61.538	Labrus_bergylta
ENSOMEG00000001001	rbm4.1	95	50.124	ENSMAMG00000001760	-	95	49.132	Mastacembelus_armatus
ENSOMEG00000001001	rbm4.1	100	80.048	ENSMAMG00000001765	rbm4.1	100	80.048	Mastacembelus_armatus
ENSOMEG00000001001	rbm4.1	100	79.810	ENSMZEG00005009205	rbm4.1	100	79.810	Maylandia_zebra
ENSOMEG00000001001	rbm4.1	100	77.069	ENSMMOG00000020479	rbm4.1	100	77.069	Mola_mola
ENSOMEG00000001001	rbm4.1	100	79.286	ENSMALG00000020544	rbm4.1	100	79.286	Monopterus_albus
ENSOMEG00000001001	rbm4.1	96	49.389	ENSMALG00000020557	-	96	50.370	Monopterus_albus
ENSOMEG00000001001	rbm4.1	100	79.810	ENSNBRG00000017755	rbm4.1	100	79.810	Neolamprologus_brichardi
ENSOMEG00000001001	rbm4.1	100	79.572	ENSONIG00000015730	rbm4.1	100	79.572	Oreochromis_niloticus
ENSOMEG00000001001	rbm4.1	100	97.842	ENSORLG00000012496	rbm4.1	100	97.842	Oryzias_latipes
ENSOMEG00000001001	rbm4.1	100	97.842	ENSORLG00020012454	rbm4.1	100	97.842	Oryzias_latipes_hni
ENSOMEG00000001001	rbm4.1	100	98.082	ENSORLG00015013678	rbm4.1	100	98.082	Oryzias_latipes_hsok
ENSOMEG00000001001	rbm4.1	100	55.955	ENSPKIG00000020805	rbm4.1	85	78.261	Paramormyrops_kingsleyae
ENSOMEG00000001001	rbm4.1	100	76.190	ENSPFOG00000012675	rbm4.1	100	76.190	Poecilia_formosa
ENSOMEG00000001001	rbm4.1	99	46.377	ENSPFOG00000012685	-	99	46.336	Poecilia_formosa
ENSOMEG00000001001	rbm4.1	100	76.190	ENSPLAG00000018572	rbm4.1	100	76.190	Poecilia_latipinna
ENSOMEG00000001001	rbm4.1	100	76.190	ENSPMEG00000006290	rbm4.1	100	76.190	Poecilia_mexicana
ENSOMEG00000001001	rbm4.1	100	76.190	ENSPREG00000003724	rbm4.1	100	76.190	Poecilia_reticulata
ENSOMEG00000001001	rbm4.1	99	68.333	ENSPREG00000003764	-	99	43.972	Poecilia_reticulata
ENSOMEG00000001001	rbm4.1	100	79.810	ENSPNYG00000004662	rbm4.1	100	79.810	Pundamilia_nyererei
ENSOMEG00000001001	rbm4.1	100	50.935	ENSPNAG00000013057	rbm4.2	100	50.820	Pygocentrus_nattereri
ENSOMEG00000001001	rbm4.1	100	63.700	ENSPNAG00000002539	rbm4.1	100	64.169	Pygocentrus_nattereri
ENSOMEG00000001001	rbm4.1	100	60.422	ENSSFOG00015021996	sf1	100	61.253	Scleropages_formosus
ENSOMEG00000001001	rbm4.1	100	75.297	ENSSMAG00000007571	rbm4.1	100	75.772	Scophthalmus_maximus
ENSOMEG00000001001	rbm4.1	99	48.333	ENSSDUG00000003936	-	99	48.148	Seriola_dumerili
ENSOMEG00000001001	rbm4.1	100	80.523	ENSSDUG00000003925	rbm4.1	100	80.523	Seriola_dumerili
ENSOMEG00000001001	rbm4.1	99	48.201	ENSSLDG00000013157	-	99	48.848	Seriola_lalandi_dorsalis
ENSOMEG00000001001	rbm4.1	100	80.523	ENSSLDG00000013147	rbm4.1	100	80.523	Seriola_lalandi_dorsalis
ENSOMEG00000001001	rbm4.1	99	46.318	ENSSPAG00000019046	-	99	46.283	Stegastes_partitus
ENSOMEG00000001001	rbm4.1	100	80.332	ENSSPAG00000019053	rbm4.1	100	81.280	Stegastes_partitus
ENSOMEG00000001001	rbm4.1	100	71.905	ENSTRUG00000013334	rbm4.1	100	71.905	Takifugu_rubripes
ENSOMEG00000001001	rbm4.1	99	45.084	ENSTRUG00000013328	-	99	44.836	Takifugu_rubripes
ENSOMEG00000001001	rbm4.1	96	46.040	ENSTNIG00000000316	-	96	46.081	Tetraodon_nigroviridis
ENSOMEG00000001001	rbm4.1	100	53.589	ENSTNIG00000004821	rbm4.1	100	85.116	Tetraodon_nigroviridis
ENSOMEG00000001001	rbm4.1	100	75.714	ENSXCOG00000003731	rbm4.1	100	75.714	Xiphophorus_couchianus
ENSOMEG00000001001	rbm4.1	100	75.952	ENSXMAG00000008069	rbm4.1	100	75.952	Xiphophorus_maculatus
ENSOMEG00000001001	rbm4.1	95	72.393	ENSXMAG00000008059	-	99	46.714	Xiphophorus_maculatus