EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000001052 (Gene tree)
Gene ID: 112139473
Gene Symbol: sar1b
Alias: -
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8325 bases
Position: chrNVQA01000005.1:20545370-20553694
Accession: 112139473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000023392	MMR_HSR1	PF01926.23	5.5e-05	1	1
ENSOMEP00000002491	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012408	-	432	-	ENSOMEP00000002491	143 (aa)	-	-
ENSOMET00000012402	-	2648	-	ENSOMEP00000023392	198 (aa)	XP_024118053	UPI000CF83150

Gene Model

Click here to download ENSOMEG00000001052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000001052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000001052	sar1b	100	83.333	ENSOMEG00000004948	sar1ab	100	83.333
ENSOMEG00000001052	sar1b	89	30.556	ENSOMEG00000023152	-	86	30.556
ENSOMEG00000001052	sar1b	64	34.351	ENSOMEG00000004308	arl4d	65	34.351
ENSOMEG00000001052	sar1b	65	36.090	ENSOMEG00000023727	ARL10	53	36.090
ENSOMEG00000001052	sar1b	67	32.673	ENSOMEG00000007253	arl4cb	67	33.835
ENSOMEG00000001052	sar1b	100	85.859	ENSOMEG00000012020	-	100	85.859
ENSOMEG00000001052	sar1b	76	30.464	ENSOMEG00000023857	arl8bb	81	30.464
ENSOMEG00000001052	sar1b	66	34.815	ENSOMEG00000003868	arl4aa	71	34.815
ENSOMEG00000001052	sar1b	94	32.105	ENSOMEG00000017204	ARL6	96	32.105
ENSOMEG00000001052	sar1b	94	31.915	ENSOMEG00000005057	arl3l2	94	31.915
ENSOMEG00000001052	sar1b	87	30.233	ENSOMEG00000007691	arl3	94	30.233
ENSOMEG00000001052	sar1b	64	34.127	ENSOMEG00000010187	arl13b	51	34.127
ENSOMEG00000001052	sar1b	86	31.579	ENSOMEG00000003861	-	87	31.579
ENSOMEG00000001052	sar1b	64	32.824	ENSOMEG00000016904	arl14	72	32.824
ENSOMEG00000001052	sar1b	92	30.055	ENSOMEG00000008521	arl2	93	30.055
ENSOMEG00000001052	sar1b	66	38.346	ENSOMEG00000022678	-	80	38.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000001052	sar1b	100	92.424	ENSAPOG00000007186	sar1b	100	92.424	Acanthochromis_polyacanthus
ENSOMEG00000001052	sar1b	100	84.343	ENSAPOG00000017891	-	100	84.343	Acanthochromis_polyacanthus
ENSOMEG00000001052	sar1b	100	93.434	ENSACIG00000013634	sar1b	100	93.434	Amphilophus_citrinellus
ENSOMEG00000001052	sar1b	100	82.828	ENSACIG00000024513	-	100	82.828	Amphilophus_citrinellus
ENSOMEG00000001052	sar1b	100	91.919	ENSAOCG00000005888	sar1b	100	91.919	Amphiprion_ocellaris
ENSOMEG00000001052	sar1b	100	84.343	ENSAOCG00000002627	-	100	84.343	Amphiprion_ocellaris
ENSOMEG00000001052	sar1b	100	91.919	ENSAPEG00000022771	sar1b	100	91.919	Amphiprion_percula
ENSOMEG00000001052	sar1b	100	84.343	ENSAPEG00000019680	-	100	84.343	Amphiprion_percula
ENSOMEG00000001052	sar1b	100	82.828	ENSATEG00000023368	-	100	82.828	Anabas_testudineus
ENSOMEG00000001052	sar1b	100	94.949	ENSATEG00000012904	sar1b	100	94.949	Anabas_testudineus
ENSOMEG00000001052	sar1b	100	90.404	ENSACAG00000001470	-	100	90.404	Anolis_carolinensis
ENSOMEG00000001052	sar1b	100	93.434	ENSACLG00000014649	sar1b	100	93.434	Astatotilapia_calliptera
ENSOMEG00000001052	sar1b	100	83.838	ENSACLG00000005011	-	100	83.838	Astatotilapia_calliptera
ENSOMEG00000001052	sar1b	71	97.030	ENSAMXG00000018108	sar1b	84	92.308	Astyanax_mexicanus
ENSOMEG00000001052	sar1b	100	84.848	ENSAMXG00000034192	-	91	84.848	Astyanax_mexicanus
ENSOMEG00000001052	sar1b	100	86.869	ENSCSEG00000015238	sar1b	97	86.869	Cynoglossus_semilaevis
ENSOMEG00000001052	sar1b	100	83.333	ENSCSEG00000016976	-	100	83.333	Cynoglossus_semilaevis
ENSOMEG00000001052	sar1b	100	93.939	ENSCVAG00000022959	sar1b	100	93.939	Cyprinodon_variegatus
ENSOMEG00000001052	sar1b	100	92.424	ENSDARG00000103403	sar1b	100	92.424	Danio_rerio
ENSOMEG00000001052	sar1b	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSOMEG00000001052	sar1b	97	88.542	ENSEBUG00000011723	sar1b	97	88.542	Eptatretus_burgeri
ENSOMEG00000001052	sar1b	100	92.929	ENSELUG00000020912	sar1b	100	92.929	Esox_lucius
ENSOMEG00000001052	sar1b	100	93.939	ENSFHEG00000019865	sar1b	100	93.939	Fundulus_heteroclitus
ENSOMEG00000001052	sar1b	100	93.434	ENSGMOG00000008023	sar1b	100	93.434	Gadus_morhua
ENSOMEG00000001052	sar1b	100	92.424	ENSGAFG00000007081	sar1b	100	92.424	Gambusia_affinis
ENSOMEG00000001052	sar1b	100	91.919	ENSGACG00000001474	sar1b	100	91.919	Gasterosteus_aculeatus
ENSOMEG00000001052	sar1b	100	83.838	ENSHBUG00000018397	-	100	83.838	Haplochromis_burtoni
ENSOMEG00000001052	sar1b	100	93.434	ENSHBUG00000000915	sar1b	100	93.434	Haplochromis_burtoni
ENSOMEG00000001052	sar1b	100	92.929	ENSHCOG00000010953	sar1b	100	92.929	Hippocampus_comes
ENSOMEG00000001052	sar1b	100	91.414	ENSIPUG00000020925	sar1b	100	91.414	Ictalurus_punctatus
ENSOMEG00000001052	sar1b	100	85.354	ENSIPUG00000010046	sar1b	100	85.354	Ictalurus_punctatus
ENSOMEG00000001052	sar1b	100	82.828	ENSKMAG00000014875	-	100	82.828	Kryptolebias_marmoratus
ENSOMEG00000001052	sar1b	100	93.434	ENSKMAG00000019693	sar1b	100	93.434	Kryptolebias_marmoratus
ENSOMEG00000001052	sar1b	100	90.404	ENSLBEG00000027550	sar1b	100	90.404	Labrus_bergylta
ENSOMEG00000001052	sar1b	100	84.848	ENSLBEG00000016945	-	100	84.848	Labrus_bergylta
ENSOMEG00000001052	sar1b	100	86.364	ENSLACG00000010795	sar1b	100	86.364	Latimeria_chalumnae
ENSOMEG00000001052	sar1b	100	72.362	ENSLACG00000017029	-	100	72.362	Latimeria_chalumnae
ENSOMEG00000001052	sar1b	100	92.929	ENSLOCG00000010197	sar1b	100	92.929	Lepisosteus_oculatus
ENSOMEG00000001052	sar1b	100	89.394	ENSLOCG00000005214	-	100	89.394	Lepisosteus_oculatus
ENSOMEG00000001052	sar1b	100	92.929	ENSMAMG00000021732	sar1b	100	92.929	Mastacembelus_armatus
ENSOMEG00000001052	sar1b	100	93.434	ENSMZEG00005008942	sar1b	100	93.434	Maylandia_zebra
ENSOMEG00000001052	sar1b	100	83.838	ENSMZEG00005001012	-	100	83.838	Maylandia_zebra
ENSOMEG00000001052	sar1b	90	91.620	ENSMGAG00000005387	-	91	91.620	Meleagris_gallopavo
ENSOMEG00000001052	sar1b	100	83.333	ENSMMOG00000013803	-	100	83.333	Mola_mola
ENSOMEG00000001052	sar1b	100	93.434	ENSMALG00000016635	sar1b	97	91.758	Monopterus_albus
ENSOMEG00000001052	sar1b	100	93.939	ENSNBRG00000008013	sar1b	100	93.939	Neolamprologus_brichardi
ENSOMEG00000001052	sar1b	100	83.838	ENSNBRG00000014004	-	100	83.838	Neolamprologus_brichardi
ENSOMEG00000001052	sar1b	100	93.939	ENSONIG00000017278	sar1b	100	93.939	Oreochromis_niloticus
ENSOMEG00000001052	sar1b	100	97.475	ENSORLG00000000932	sar1b	100	97.475	Oryzias_latipes
ENSOMEG00000001052	sar1b	100	97.475	ENSORLG00020021985	sar1b	100	97.475	Oryzias_latipes_hni
ENSOMEG00000001052	sar1b	100	97.475	ENSORLG00015007044	sar1b	100	97.475	Oryzias_latipes_hsok
ENSOMEG00000001052	sar1b	100	92.929	ENSPKIG00000017353	-	100	92.929	Paramormyrops_kingsleyae
ENSOMEG00000001052	sar1b	100	91.919	ENSPKIG00000010688	sar1b	100	91.919	Paramormyrops_kingsleyae
ENSOMEG00000001052	sar1b	75	92.523	ENSPMGG00000001234	sar1b	91	95.690	Periophthalmus_magnuspinnatus
ENSOMEG00000001052	sar1b	100	84.577	ENSPMAG00000003593	sar1b	100	84.577	Petromyzon_marinus
ENSOMEG00000001052	sar1b	100	92.424	ENSPFOG00000005666	sar1b	100	92.424	Poecilia_formosa
ENSOMEG00000001052	sar1b	100	91.919	ENSPLAG00000012223	sar1b	100	91.919	Poecilia_latipinna
ENSOMEG00000001052	sar1b	72	91.262	ENSPLAG00000001016	-	75	88.034	Poecilia_latipinna
ENSOMEG00000001052	sar1b	100	92.424	ENSPMEG00000016831	sar1b	100	92.424	Poecilia_mexicana
ENSOMEG00000001052	sar1b	84	76.744	ENSPREG00000002020	-	87	87.288	Poecilia_reticulata
ENSOMEG00000001052	sar1b	100	92.424	ENSPREG00000005312	sar1b	90	92.424	Poecilia_reticulata
ENSOMEG00000001052	sar1b	100	93.434	ENSPNYG00000012440	sar1b	100	93.434	Pundamilia_nyererei
ENSOMEG00000001052	sar1b	100	83.838	ENSPNYG00000021357	-	100	83.838	Pundamilia_nyererei
ENSOMEG00000001052	sar1b	100	85.859	ENSPNAG00000001123	-	100	85.859	Pygocentrus_nattereri
ENSOMEG00000001052	sar1b	100	91.919	ENSPNAG00000014683	sar1b	100	91.919	Pygocentrus_nattereri
ENSOMEG00000001052	sar1b	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSOMEG00000001052	sar1b	100	92.929	ENSSFOG00015020051	sar1b	100	92.929	Scleropages_formosus
ENSOMEG00000001052	sar1b	100	84.343	ENSSMAG00000002165	-	100	84.343	Scophthalmus_maximus
ENSOMEG00000001052	sar1b	100	89.899	ENSSMAG00000007106	sar1b	80	89.899	Scophthalmus_maximus
ENSOMEG00000001052	sar1b	100	94.444	ENSSDUG00000020926	sar1b	100	94.444	Seriola_dumerili
ENSOMEG00000001052	sar1b	100	83.838	ENSSDUG00000019629	-	100	83.838	Seriola_dumerili
ENSOMEG00000001052	sar1b	100	94.444	ENSSLDG00000017052	sar1b	100	94.444	Seriola_lalandi_dorsalis
ENSOMEG00000001052	sar1b	100	83.838	ENSSLDG00000024197	-	100	83.838	Seriola_lalandi_dorsalis
ENSOMEG00000001052	sar1b	100	90.404	ENSSPUG00000010247	-	100	90.404	Sphenodon_punctatus
ENSOMEG00000001052	sar1b	100	83.838	ENSSPAG00000015626	-	100	83.838	Stegastes_partitus
ENSOMEG00000001052	sar1b	100	92.929	ENSSPAG00000017634	sar1b	100	92.929	Stegastes_partitus
ENSOMEG00000001052	sar1b	100	86.869	ENSTRUG00000023908	sar1b	100	86.869	Takifugu_rubripes
ENSOMEG00000001052	sar1b	100	88.384	ENSTNIG00000016097	sar1b	100	88.384	Tetraodon_nigroviridis
ENSOMEG00000001052	sar1b	72	91.262	ENSXCOG00000006154	-	81	85.000	Xiphophorus_couchianus
ENSOMEG00000001052	sar1b	90	91.573	ENSXCOG00000004160	sar1b	87	91.573	Xiphophorus_couchianus
ENSOMEG00000001052	sar1b	100	92.424	ENSXMAG00000008294	sar1b	100	92.424	Xiphophorus_maculatus