EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000001170 (Gene tree)
Gene ID: 112151416
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 178409 bases
Position: chrNVQA01000015.1:19968186-20146594
Accession: 112151416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000000284	RRM_1	PF00076.22	2.2e-11	1	1
ENSOMEP00000021909	RRM_1	PF00076.22	2.2e-11	1	1
ENSOMEP00000000287	RRM_1	PF00076.22	9.7e-11	1	1
ENSOMEP00000000286	RRM_1	PF00076.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000016112	-	4362	-	ENSOMEP00000000286	292 (aa)	XP_024136126	UPI000CF827F9
ENSOMET00000016113	-	4314	-	ENSOMEP00000000287	276 (aa)	-	-
ENSOMET00000016110	-	1182	-	ENSOMEP00000000284	117 (aa)	-	-
ENSOMET00000016116	-	801	-	ENSOMEP00000021909	117 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000001170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000001170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000001170	-	66	79.221	ENSOMEG00000020488	-	83	50.000
ENSOMEG00000001170	-	66	80.519	ENSOMEG00000022665	-	94	48.562
ENSOMEG00000001170	-	100	72.973	ENSOMEG00000011821	-	100	71.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000001170	-	100	73.311	ENSAPOG00000008744	-	100	73.311	Acanthochromis_polyacanthus
ENSOMEG00000001170	-	95	70.690	ENSACIG00000007143	-	97	67.354	Amphilophus_citrinellus
ENSOMEG00000001170	-	100	97.603	ENSAOCG00000001605	-	100	97.603	Amphiprion_ocellaris
ENSOMEG00000001170	-	100	73.986	ENSAOCG00000023599	-	100	73.986	Amphiprion_ocellaris
ENSOMEG00000001170	-	94	71.304	ENSATEG00000022219	-	93	70.805	Anabas_testudineus
ENSOMEG00000001170	-	77	95.556	ENSATEG00000023356	-	87	95.556	Anabas_testudineus
ENSOMEG00000001170	-	100	74.237	ENSACLG00000011720	-	100	74.237	Astatotilapia_calliptera
ENSOMEG00000001170	-	100	97.270	ENSACLG00000006949	-	100	97.270	Astatotilapia_calliptera
ENSOMEG00000001170	-	100	89.726	ENSAMXG00000019031	-	100	89.726	Astyanax_mexicanus
ENSOMEG00000001170	-	100	64.983	ENSAMXG00000032617	-	100	64.983	Astyanax_mexicanus
ENSOMEG00000001170	-	100	67.905	ENSCSEG00000014237	-	100	67.568	Cynoglossus_semilaevis
ENSOMEG00000001170	-	100	72.973	ENSCVAG00000013624	-	100	72.973	Cyprinodon_variegatus
ENSOMEG00000001170	-	100	95.904	ENSCVAG00000018104	-	100	95.904	Cyprinodon_variegatus
ENSOMEG00000001170	-	88	71.296	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSOMEG00000001170	-	81	73.684	ENSELUG00000015350	-	93	78.824	Esox_lucius
ENSOMEG00000001170	-	94	75.269	ENSELUG00000001702	-	97	76.344	Esox_lucius
ENSOMEG00000001170	-	73	94.118	ENSGMOG00000005914	-	100	77.576	Gadus_morhua
ENSOMEG00000001170	-	73	94.118	ENSGACG00000004991	-	91	93.976	Gasterosteus_aculeatus
ENSOMEG00000001170	-	100	73.986	ENSHBUG00000010040	-	100	73.986	Haplochromis_burtoni
ENSOMEG00000001170	-	100	97.270	ENSHBUG00000015412	-	100	97.270	Haplochromis_burtoni
ENSOMEG00000001170	-	100	90.068	ENSIPUG00000000507	ralyl	100	90.068	Ictalurus_punctatus
ENSOMEG00000001170	-	100	70.608	ENSKMAG00000022093	-	100	72.297	Kryptolebias_marmoratus
ENSOMEG00000001170	-	100	96.233	ENSKMAG00000018155	-	100	96.233	Kryptolebias_marmoratus
ENSOMEG00000001170	-	100	73.649	ENSLBEG00000012873	-	100	73.311	Labrus_bergylta
ENSOMEG00000001170	-	100	93.174	ENSLBEG00000011011	-	100	93.515	Labrus_bergylta
ENSOMEG00000001170	-	100	84.247	ENSLOCG00000012787	ralyl	99	83.904	Lepisosteus_oculatus
ENSOMEG00000001170	-	99	70.000	ENSMAMG00000001723	-	97	70.000	Mastacembelus_armatus
ENSOMEG00000001170	-	100	74.237	ENSMZEG00005024447	-	100	74.237	Maylandia_zebra
ENSOMEG00000001170	-	98	92.440	ENSMZEG00005018748	-	99	91.409	Maylandia_zebra
ENSOMEG00000001170	-	99	66.942	ENSMMOG00000020441	-	86	64.333	Mola_mola
ENSOMEG00000001170	-	100	74.324	ENSMALG00000019019	-	78	74.324	Monopterus_albus
ENSOMEG00000001170	-	100	95.548	ENSMALG00000012952	-	100	95.548	Monopterus_albus
ENSOMEG00000001170	-	98	93.471	ENSNBRG00000011376	-	99	93.471	Neolamprologus_brichardi
ENSOMEG00000001170	-	97	68.041	ENSNBRG00000011206	-	97	68.041	Neolamprologus_brichardi
ENSOMEG00000001170	-	100	98.973	ENSORLG00000012719	-	100	98.973	Oryzias_latipes
ENSOMEG00000001170	-	100	72.635	ENSORLG00000017934	-	100	70.608	Oryzias_latipes
ENSOMEG00000001170	-	100	98.973	ENSORLG00020004438	-	100	98.973	Oryzias_latipes_hni
ENSOMEG00000001170	-	100	71.284	ENSORLG00020000082	-	100	70.270	Oryzias_latipes_hni
ENSOMEG00000001170	-	100	72.635	ENSORLG00015004280	-	100	70.608	Oryzias_latipes_hsok
ENSOMEG00000001170	-	100	98.973	ENSORLG00015004727	-	100	98.973	Oryzias_latipes_hsok
ENSOMEG00000001170	-	100	79.522	ENSPKIG00000015926	-	100	79.522	Paramormyrops_kingsleyae
ENSOMEG00000001170	-	99	67.230	ENSPMGG00000009532	-	99	67.230	Periophthalmus_magnuspinnatus
ENSOMEG00000001170	-	73	96.471	ENSPMGG00000014481	-	98	81.780	Periophthalmus_magnuspinnatus
ENSOMEG00000001170	-	97	70.470	ENSPFOG00000006120	-	99	70.470	Poecilia_formosa
ENSOMEG00000001170	-	97	69.853	ENSPLAG00000009877	-	76	69.343	Poecilia_latipinna
ENSOMEG00000001170	-	97	97.203	ENSPLAG00000011323	ralyl	100	97.203	Poecilia_latipinna
ENSOMEG00000001170	-	97	97.203	ENSPMEG00000023847	ralyl	100	97.203	Poecilia_mexicana
ENSOMEG00000001170	-	97	69.853	ENSPMEG00000013624	-	80	69.343	Poecilia_mexicana
ENSOMEG00000001170	-	97	73.171	ENSPREG00000013805	-	100	68.038	Poecilia_reticulata
ENSOMEG00000001170	-	97	95.105	ENSPREG00000001956	ralyl	100	95.105	Poecilia_reticulata
ENSOMEG00000001170	-	98	92.440	ENSPNYG00000003548	-	99	91.409	Pundamilia_nyererei
ENSOMEG00000001170	-	97	68.041	ENSPNYG00000008772	-	97	68.041	Pundamilia_nyererei
ENSOMEG00000001170	-	100	90.411	ENSPNAG00000000498	-	88	90.068	Pygocentrus_nattereri
ENSOMEG00000001170	-	100	68.601	ENSPNAG00000026098	-	100	67.808	Pygocentrus_nattereri
ENSOMEG00000001170	-	100	90.136	ENSSFOG00015009401	-	100	88.435	Scleropages_formosus
ENSOMEG00000001170	-	100	72.302	ENSSFOG00015004575	-	96	79.401	Scleropages_formosus
ENSOMEG00000001170	-	97	70.877	ENSSMAG00000015907	-	93	70.877	Scophthalmus_maximus
ENSOMEG00000001170	-	100	93.836	ENSSMAG00000005608	-	100	93.836	Scophthalmus_maximus
ENSOMEG00000001170	-	100	73.986	ENSSDUG00000012473	-	100	73.986	Seriola_dumerili
ENSOMEG00000001170	-	100	97.464	ENSSDUG00000007587	-	100	97.464	Seriola_dumerili
ENSOMEG00000001170	-	100	96.587	ENSSLDG00000020603	-	100	96.587	Seriola_lalandi_dorsalis
ENSOMEG00000001170	-	100	73.649	ENSSLDG00000011534	-	100	73.649	Seriola_lalandi_dorsalis
ENSOMEG00000001170	-	73	89.412	ENSSPAG00000013858	-	96	63.604	Stegastes_partitus
ENSOMEG00000001170	-	89	72.477	ENSTRUG00000003829	-	95	71.378	Takifugu_rubripes
ENSOMEG00000001170	-	97	68.027	ENSTNIG00000005594	-	99	68.027	Tetraodon_nigroviridis
ENSOMEG00000001170	-	100	71.769	ENSXETG00000017729	ralyl	99	72.789	Xenopus_tropicalis
ENSOMEG00000001170	-	97	94.218	ENSXCOG00000015156	-	93	94.218	Xiphophorus_couchianus
ENSOMEG00000001170	-	100	73.986	ENSXMAG00000007614	-	100	73.986	Xiphophorus_maculatus
ENSOMEG00000001170	-	100	98.551	ENSXMAG00000008396	-	100	98.551	Xiphophorus_maculatus