EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000001225 (Gene tree)
Gene ID: 112145495
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 41260 bases
Position: chrNVQA01000009.1:24669456-24710715
Accession: 112145495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000000329	SHQ1	PF04925.15	4e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000016018	-	2675	-	ENSOMEP00000000329	552 (aa)	XP_024126531	UPI000CF818D2

Gene Model

Click here to download ENSOMEG00000001225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000001225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000001225	shq1	74	61.205	ENSG00000144736	SHQ1	96	68.750	Homo_sapiens
ENSOMEG00000001225	shq1	97	68.213	ENSAPOG00000000397	shq1	95	68.213	Acanthochromis_polyacanthus
ENSOMEG00000001225	shq1	77	60.092	ENSAMEG00000015140	SHQ1	75	60.185	Ailuropoda_melanoleuca
ENSOMEG00000001225	shq1	97	66.957	ENSACIG00000021249	shq1	95	68.522	Amphilophus_citrinellus
ENSOMEG00000001225	shq1	97	67.350	ENSAOCG00000023311	shq1	95	68.034	Amphiprion_ocellaris
ENSOMEG00000001225	shq1	97	67.931	ENSAPEG00000021686	shq1	95	68.448	Amphiprion_percula
ENSOMEG00000001225	shq1	92	70.709	ENSATEG00000008475	shq1	89	70.336	Anabas_testudineus
ENSOMEG00000001225	shq1	80	57.650	ENSAPLG00000013926	SHQ1	95	54.825	Anas_platyrhynchos
ENSOMEG00000001225	shq1	76	60.000	ENSACAG00000014809	SHQ1	64	60.970	Anolis_carolinensis
ENSOMEG00000001225	shq1	84	41.970	ENSANAG00000030500	-	72	43.468	Aotus_nancymaae
ENSOMEG00000001225	shq1	99	51.930	ENSANAG00000029241	SHQ1	75	60.185	Aotus_nancymaae
ENSOMEG00000001225	shq1	97	67.304	ENSACLG00000023077	shq1	92	68.000	Astatotilapia_calliptera
ENSOMEG00000001225	shq1	77	62.353	ENSAMXG00000043822	shq1	74	63.466	Astyanax_mexicanus
ENSOMEG00000001225	shq1	70	61.307	ENSBTAG00000005436	SHQ1	74	60.880	Bos_taurus
ENSOMEG00000001225	shq1	76	30.137	WBGene00021655	Y48A5A.1	92	30.288	Caenorhabditis_elegans
ENSOMEG00000001225	shq1	74	60.000	ENSCJAG00000015131	SHQ1	74	59.954	Callithrix_jacchus
ENSOMEG00000001225	shq1	70	60.553	ENSCAFG00000006434	SHQ1	74	59.722	Canis_familiaris
ENSOMEG00000001225	shq1	70	60.804	ENSCAFG00020016743	SHQ1	74	59.954	Canis_lupus_dingo
ENSOMEG00000001225	shq1	70	61.558	ENSCHIG00000012271	SHQ1	68	61.111	Capra_hircus
ENSOMEG00000001225	shq1	74	57.767	ENSTSYG00000014439	SHQ1	75	57.809	Carlito_syrichta
ENSOMEG00000001225	shq1	87	47.305	ENSCAPG00000009343	SHQ1	61	67.105	Cavia_aperea
ENSOMEG00000001225	shq1	80	59.508	ENSCPOG00000011443	SHQ1	74	60.557	Cavia_porcellus
ENSOMEG00000001225	shq1	98	41.081	ENSCCAG00000036087	-	73	45.972	Cebus_capucinus
ENSOMEG00000001225	shq1	74	51.325	ENSCCAG00000027080	SHQ1	73	51.852	Cebus_capucinus
ENSOMEG00000001225	shq1	74	61.205	ENSCATG00000041238	SHQ1	74	61.111	Cercocebus_atys
ENSOMEG00000001225	shq1	74	60.723	ENSCLAG00000004206	SHQ1	75	60.648	Chinchilla_lanigera
ENSOMEG00000001225	shq1	57	59.816	ENSCSAG00000011514	SHQ1	70	59.767	Chlorocebus_sabaeus
ENSOMEG00000001225	shq1	51	68.333	ENSCHOG00000003273	-	84	68.333	Choloepus_hoffmanni
ENSOMEG00000001225	shq1	79	60.674	ENSCPBG00000006441	SHQ1	70	61.201	Chrysemys_picta_bellii
ENSOMEG00000001225	shq1	79	41.176	ENSCING00000008013	-	94	41.299	Ciona_intestinalis
ENSOMEG00000001225	shq1	78	40.000	ENSCSAVG00000002332	-	97	39.767	Ciona_savignyi
ENSOMEG00000001225	shq1	99	52.595	ENSCANG00000039295	SHQ1	75	61.574	Colobus_angolensis_palliatus
ENSOMEG00000001225	shq1	78	60.181	ENSCGRG00001012583	Shq1	76	60.880	Cricetulus_griseus_chok1gshd
ENSOMEG00000001225	shq1	78	60.181	ENSCGRG00000009849	Shq1	76	60.880	Cricetulus_griseus_crigri
ENSOMEG00000001225	shq1	96	64.510	ENSCSEG00000007829	shq1	92	65.559	Cynoglossus_semilaevis
ENSOMEG00000001225	shq1	92	71.483	ENSCVAG00000020049	shq1	96	69.395	Cyprinodon_variegatus
ENSOMEG00000001225	shq1	78	68.213	ENSDARG00000058522	shq1	72	68.310	Danio_rerio
ENSOMEG00000001225	shq1	74	61.446	ENSDNOG00000033937	SHQ1	75	61.343	Dasypus_novemcinctus
ENSOMEG00000001225	shq1	74	52.771	ENSETEG00000005766	SHQ1	75	53.009	Echinops_telfairi
ENSOMEG00000001225	shq1	65	46.883	ENSEBUG00000005445	shq1	73	48.916	Eptatretus_burgeri
ENSOMEG00000001225	shq1	80	59.867	ENSEASG00005002237	SHQ1	75	61.111	Equus_asinus_asinus
ENSOMEG00000001225	shq1	80	59.867	ENSECAG00000015673	SHQ1	73	61.111	Equus_caballus
ENSOMEG00000001225	shq1	80	60.802	ENSEEUG00000010568	SHQ1	75	61.574	Erinaceus_europaeus
ENSOMEG00000001225	shq1	74	71.253	ENSELUG00000003476	shq1	81	68.421	Esox_lucius
ENSOMEG00000001225	shq1	74	60.723	ENSFCAG00000012781	SHQ1	75	60.648	Felis_catus
ENSOMEG00000001225	shq1	74	62.053	ENSFALG00000013428	SHQ1	70	62.125	Ficedula_albicollis
ENSOMEG00000001225	shq1	80	58.575	ENSFDAG00000005595	SHQ1	67	59.908	Fukomys_damarensis
ENSOMEG00000001225	shq1	95	68.659	ENSFHEG00000017552	shq1	99	66.323	Fundulus_heteroclitus
ENSOMEG00000001225	shq1	70	72.680	ENSGMOG00000007350	shq1	100	72.680	Gadus_morhua
ENSOMEG00000001225	shq1	77	61.149	ENSGALG00000007798	SHQ1	71	60.739	Gallus_gallus
ENSOMEG00000001225	shq1	70	78.663	ENSGACG00000011797	shq1	100	78.663	Gasterosteus_aculeatus
ENSOMEG00000001225	shq1	74	60.723	ENSGGOG00000034818	SHQ1	74	60.648	Gorilla_gorilla
ENSOMEG00000001225	shq1	97	67.247	ENSHBUG00000010857	shq1	95	67.535	Haplochromis_burtoni
ENSOMEG00000001225	shq1	79	59.142	ENSHGLG00000003637	SHQ1	67	59.677	Heterocephalus_glaber_female
ENSOMEG00000001225	shq1	79	59.142	ENSHGLG00100011957	SHQ1	67	59.677	Heterocephalus_glaber_male
ENSOMEG00000001225	shq1	97	64.413	ENSHCOG00000010799	shq1	95	64.235	Hippocampus_comes
ENSOMEG00000001225	shq1	78	66.051	ENSIPUG00000001247	shq1	74	66.432	Ictalurus_punctatus
ENSOMEG00000001225	shq1	79	58.072	ENSSTOG00000010043	SHQ1	79	58.796	Ictidomys_tridecemlineatus
ENSOMEG00000001225	shq1	74	60.482	ENSJJAG00000017611	Shq1	76	60.648	Jaculus_jaculus
ENSOMEG00000001225	shq1	93	69.573	ENSKMAG00000004457	shq1	96	69.697	Kryptolebias_marmoratus
ENSOMEG00000001225	shq1	79	60.674	ENSLACG00000014243	SHQ1	65	62.269	Latimeria_chalumnae
ENSOMEG00000001225	shq1	80	67.550	ENSLOCG00000009970	shq1	75	67.735	Lepisosteus_oculatus
ENSOMEG00000001225	shq1	74	60.964	ENSMFAG00000039148	SHQ1	74	60.880	Macaca_fascicularis
ENSOMEG00000001225	shq1	74	42.647	ENSMFAG00000037396	-	72	43.294	Macaca_fascicularis
ENSOMEG00000001225	shq1	80	43.084	ENSMMUG00000021761	-	72	43.294	Macaca_mulatta
ENSOMEG00000001225	shq1	65	59.946	ENSMMUG00000009571	SHQ1	69	59.896	Macaca_mulatta
ENSOMEG00000001225	shq1	74	60.964	ENSMNEG00000032667	SHQ1	74	60.880	Macaca_nemestrina
ENSOMEG00000001225	shq1	74	60.723	ENSMLEG00000038493	SHQ1	74	60.648	Mandrillus_leucophaeus
ENSOMEG00000001225	shq1	96	67.483	ENSMAMG00000023432	shq1	89	66.782	Mastacembelus_armatus
ENSOMEG00000001225	shq1	97	67.596	ENSMZEG00005008649	shq1	95	68.118	Maylandia_zebra
ENSOMEG00000001225	shq1	77	60.780	ENSMGAG00000009640	SHQ1	72	60.599	Meleagris_gallopavo
ENSOMEG00000001225	shq1	79	59.417	ENSMAUG00000022030	Shq1	76	60.417	Mesocricetus_auratus
ENSOMEG00000001225	shq1	82	56.144	ENSMICG00000009224	SHQ1	74	58.565	Microcebus_murinus
ENSOMEG00000001225	shq1	80	59.243	ENSMOCG00000017836	Shq1	76	60.417	Microtus_ochrogaster
ENSOMEG00000001225	shq1	92	66.231	ENSMMOG00000010569	shq1	91	66.791	Mola_mola
ENSOMEG00000001225	shq1	77	57.666	ENSMODG00000003926	SHQ1	78	57.737	Monodelphis_domestica
ENSOMEG00000001225	shq1	99	66.667	ENSMALG00000008870	shq1	95	67.776	Monopterus_albus
ENSOMEG00000001225	shq1	81	58.811	MGP_CAROLIEiJ_G0028689	Shq1	76	61.111	Mus_caroli
ENSOMEG00000001225	shq1	81	59.031	ENSMUSG00000035378	Shq1	76	61.574	Mus_musculus
ENSOMEG00000001225	shq1	81	58.862	MGP_PahariEiJ_G0022440	Shq1	76	61.574	Mus_pahari
ENSOMEG00000001225	shq1	89	56.040	MGP_SPRETEiJ_G0029717	Shq1	76	61.574	Mus_spretus
ENSOMEG00000001225	shq1	95	51.246	ENSMPUG00000017006	SHQ1	73	59.954	Mustela_putorius_furo
ENSOMEG00000001225	shq1	87	49.809	ENSMLUG00000013539	SHQ1	73	58.290	Myotis_lucifugus
ENSOMEG00000001225	shq1	85	50.622	ENSNGAG00000023317	Shq1	75	54.137	Nannospalax_galili
ENSOMEG00000001225	shq1	79	64.271	ENSNBRG00000024004	shq1	94	64.742	Neolamprologus_brichardi
ENSOMEG00000001225	shq1	84	57.464	ENSNLEG00000002731	SHQ1	74	61.111	Nomascus_leucogenys
ENSOMEG00000001225	shq1	72	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSOMEG00000001225	shq1	80	57.812	ENSODEG00000009192	SHQ1	79	59.629	Octodon_degus
ENSOMEG00000001225	shq1	99	65.385	ENSONIG00000020264	shq1	99	66.054	Oreochromis_niloticus
ENSOMEG00000001225	shq1	74	61.538	ENSOCUG00000016695	SHQ1	74	61.432	Oryctolagus_cuniculus
ENSOMEG00000001225	shq1	100	87.568	ENSORLG00000023538	shq1	99	88.829	Oryzias_latipes
ENSOMEG00000001225	shq1	100	88.288	ENSORLG00020003697	shq1	99	89.550	Oryzias_latipes_hni
ENSOMEG00000001225	shq1	100	86.667	ENSORLG00015021040	shq1	99	87.928	Oryzias_latipes_hsok
ENSOMEG00000001225	shq1	82	57.505	ENSOGAG00000003898	SHQ1	76	59.540	Otolemur_garnettii
ENSOMEG00000001225	shq1	80	58.901	ENSOARG00000009547	SHQ1	75	60.092	Ovis_aries
ENSOMEG00000001225	shq1	74	61.446	ENSPPAG00000027714	SHQ1	74	61.343	Pan_paniscus
ENSOMEG00000001225	shq1	99	40.179	ENSPPAG00000043263	-	72	43.692	Pan_paniscus
ENSOMEG00000001225	shq1	74	60.723	ENSPPRG00000004769	SHQ1	75	60.648	Panthera_pardus
ENSOMEG00000001225	shq1	74	57.561	ENSPTIG00000011478	SHQ1	74	57.611	Panthera_tigris_altaica
ENSOMEG00000001225	shq1	99	39.929	ENSPTRG00000048303	-	72	43.357	Pan_troglodytes
ENSOMEG00000001225	shq1	74	61.446	ENSPTRG00000015106	SHQ1	74	61.343	Pan_troglodytes
ENSOMEG00000001225	shq1	74	60.000	ENSPANG00000002881	SHQ1	74	61.111	Papio_anubis
ENSOMEG00000001225	shq1	76	67.933	ENSPKIG00000021517	shq1	72	68.215	Paramormyrops_kingsleyae
ENSOMEG00000001225	shq1	80	59.424	ENSPSIG00000005536	SHQ1	80	56.939	Pelodiscus_sinensis
ENSOMEG00000001225	shq1	97	60.854	ENSPMGG00000008838	shq1	96	61.032	Periophthalmus_magnuspinnatus
ENSOMEG00000001225	shq1	74	60.723	ENSPEMG00000000251	Shq1	76	60.648	Peromyscus_maniculatus_bairdii
ENSOMEG00000001225	shq1	77	57.339	ENSPMAG00000005372	shq1	94	58.273	Petromyzon_marinus
ENSOMEG00000001225	shq1	96	68.529	ENSPFOG00000003118	shq1	98	68.901	Poecilia_formosa
ENSOMEG00000001225	shq1	80	67.489	ENSPMEG00000011076	shq1	98	67.265	Poecilia_mexicana
ENSOMEG00000001225	shq1	87	67.909	ENSPREG00000000591	shq1	92	68.323	Poecilia_reticulata
ENSOMEG00000001225	shq1	74	61.446	ENSPPYG00000013717	SHQ1	74	61.343	Pongo_abelii
ENSOMEG00000001225	shq1	74	60.287	ENSPCAG00000009035	SHQ1	75	60.648	Procavia_capensis
ENSOMEG00000001225	shq1	74	59.712	ENSPCOG00000008415	SHQ1	74	59.447	Propithecus_coquereli
ENSOMEG00000001225	shq1	74	60.241	ENSPVAG00000017392	SHQ1	75	60.185	Pteropus_vampyrus
ENSOMEG00000001225	shq1	97	67.304	ENSPNYG00000003878	shq1	95	68.000	Pundamilia_nyererei
ENSOMEG00000001225	shq1	77	68.310	ENSPNAG00000026840	shq1	70	68.852	Pygocentrus_nattereri
ENSOMEG00000001225	shq1	80	58.628	ENSRNOG00000005433	Shq1	71	60.880	Rattus_norvegicus
ENSOMEG00000001225	shq1	99	51.053	ENSRBIG00000026280	SHQ1	74	59.434	Rhinopithecus_bieti
ENSOMEG00000001225	shq1	99	52.768	ENSRROG00000034126	SHQ1	75	61.574	Rhinopithecus_roxellana
ENSOMEG00000001225	shq1	74	53.976	ENSSBOG00000021038	SHQ1	73	54.167	Saimiri_boliviensis_boliviensis
ENSOMEG00000001225	shq1	78	59.681	ENSSHAG00000015077	SHQ1	77	59.815	Sarcophilus_harrisii
ENSOMEG00000001225	shq1	80	70.455	ENSSFOG00015016241	shq1	77	71.395	Scleropages_formosus
ENSOMEG00000001225	shq1	97	68.917	ENSSMAG00000016151	shq1	93	68.739	Scophthalmus_maximus
ENSOMEG00000001225	shq1	97	67.863	ENSSDUG00000011986	shq1	96	68.889	Seriola_dumerili
ENSOMEG00000001225	shq1	97	67.986	ENSSLDG00000013908	shq1	96	67.814	Seriola_lalandi_dorsalis
ENSOMEG00000001225	shq1	92	45.936	ENSSARG00000007119	SHQ1	60	57.185	Sorex_araneus
ENSOMEG00000001225	shq1	63	58.427	ENSSPUG00000011526	-	64	59.302	Sphenodon_punctatus
ENSOMEG00000001225	shq1	99	51.897	ENSSSCG00000011518	SHQ1	74	61.343	Sus_scrofa
ENSOMEG00000001225	shq1	74	60.766	ENSTGUG00000009933	SHQ1	75	60.920	Taeniopygia_guttata
ENSOMEG00000001225	shq1	97	62.032	ENSTRUG00000009446	shq1	94	63.472	Takifugu_rubripes
ENSOMEG00000001225	shq1	74	70.732	ENSTNIG00000007354	shq1	95	70.396	Tetraodon_nigroviridis
ENSOMEG00000001225	shq1	59	68.085	ENSTBEG00000011295	SHQ1	52	68.085	Tupaia_belangeri
ENSOMEG00000001225	shq1	79	59.193	ENSTTRG00000005320	SHQ1	75	59.954	Tursiops_truncatus
ENSOMEG00000001225	shq1	77	60.187	ENSUMAG00000024031	SHQ1	74	60.284	Ursus_maritimus
ENSOMEG00000001225	shq1	70	60.804	ENSVVUG00000013906	SHQ1	74	59.954	Vulpes_vulpes
ENSOMEG00000001225	shq1	79	58.503	ENSXETG00000032215	shq1	70	59.346	Xenopus_tropicalis